Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G1452 Cannabis sativa HOM05D006830 ORTHO05D008119 3.9e-127 459.1 458 100.0
CANSAT60G0001 Cannabis sativa HOM05D006830 ORTHO05D008119 9.3e-97 358.2 460 89.3
TWI77G0580 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 2.7e-19 100.9 111 51.4
TWI74G0093 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 5.9e-19 99.8 111 53.2
Cfa017009 Carpinus fangiana HOM05D006830 ORTHO05D008119 5.0e-18 96.7 264 32.2
QL07p031724 Quercus lobata HOM05D006830 ORTHO05D008119 4.3e-17 93.6 249 33.3
GSVIVG01025871001 Vitis vinifera HOM05D006830 ORTHO05D008119 2.8e-16 90.9 128 45.3
MD12G1191100 Malus domestica HOM05D006830 ORTHO05D008119 4.7e-16 90.1 240 30.4
PGR031G0539 Punica granatum HOM05D006830 ORTHO05D008119 4.7e-16 90.1 127 44.9
Ciclev10011645m.g Citrus clementina HOM05D006830 ORTHO05D008119 6.1e-16 89.7 113 46.9
Haze_21197 Corylus avellana HOM05D006830 ORTHO05D008119 6.1e-16 89.7 151 43.0
Atru.chr8.80 Acer truncatum HOM05D006830 ORTHO05D008119 8.0e-16 89.4 110 51.8
Hund19745 Selenicereus undatus HOM05D006830 ORTHO05D008119 1.4e-15 88.6 69 68.1
AUR62029792 Chenopodium quinoa HOM05D006830 ORTHO05D008119 2.3e-15 87.8 248 29.4
Glyma.18G216100 Glycine max HOM05D006830 ORTHO05D008119 2.3e-15 87.8 103 54.4
arahy.Tifrunner.gnm1.ann1.QV5EPW Arachis hypogaea HOM05D006830 ORTHO05D008119 3.0e-15 87.4 122 47.5
Glyma.09G273000 Glycine max HOM05D006830 ORTHO05D008119 4.0e-15 87.0 101 50.5
Ah.08g209170 Amaranthus hybridus HOM05D006830 ORTHO05D008119 5.2e-15 86.7 83 61.4
Cc06_g00270 Coffea canephora HOM05D002857 ORTHO05D008347 6.8e-15 86.3 131 47.3
TAR636G3618 Trochodendron aralioides HOM05D006830 ORTHO05D008119 1.2e-14 85.5 130 43.8
PSO339G2021 Papaver somniferum HOM05D006830 ORTHO05D008119 1.5e-14 85.1 105 50.5
arahy.Tifrunner.gnm1.ann1.E2XN58 Arachis hypogaea HOM05D006830 ORTHO05D008119 2.0e-14 84.7 125 47.2
AUR62006437 Chenopodium quinoa HOM05D006830 ORTHO05D008119 2.0e-14 84.7 248 28.6
EL10Ac7g17129 Beta vulgaris HOM05D006830 ORTHO05D008119 2.6e-14 84.3 95 51.6
Potri.016G139000 Populus trichocarpa HOM05D006830 ORTHO05D008119 5.8e-14 83.2 57 73.7
Lj2A57T75 Lonicera japonica HOM05D006830 ORTHO05D008119 7.5e-14 82.8 95 51.6
MSTRG.18932 Avicennia marina HOM05D006830 ORTHO05D008119 9.8e-14 82.4 114 46.5
PSO384G2539 Papaver somniferum HOM05D006830 ORTHO05D008119 1.3e-13 82.0 100 50.0
Potri.006G110400 Populus trichocarpa HOM05D006830 ORTHO05D008119 1.7e-13 81.6 125 40.8
Eucgr.A00784 Eucalyptus grandis HOM05D006830 ORTHO05D008119 2.2e-13 81.3 128 44.5
Oeu026939.4 Olea europaea HOM05D006830 ORTHO05D008119 2.2e-13 81.3 66 66.7
Dinv16956 Davidia involucrata HOM05D006830 ORTHO05D008119 2.9e-13 80.9 67 68.7
Oeu030099.2 Olea europaea HOM05D006830 ORTHO05D008119 2.9e-13 80.9 121 45.5
Manes.08G169600 Manihot esculenta HOM05D006830 ORTHO05D008119 3.7e-13 80.5 249 29.7
Prupe.6G296200 Prunus persica HOM05D006830 ORTHO05D008119 3.7e-13 80.5 236 28.4
Lalb_Chr01g0023901 Lupinus albus HOM05D006830 ORTHO05D008119 4.9e-13 80.1 71 60.6
Gorai.006G236000 Gossypium raimondii HOM05D006830 ORTHO05D008119 6.4e-13 79.7 128 38.3
Peaxi162Scf00732g00253 Petunia axillaris HOM05D006830 ORTHO05D008119 8.3e-13 79.3 68 64.7
RcHm_v2.0_Chr3g0460131 Rosa chinensis HOM05D006830 ORTHO05D008119 1.1e-12 79.0 259 29.7
Nitab4.5_0000048g0180 Nicotiana tabacum HOM05D006830 ORTHO05D008119 1.4e-12 78.6 124 44.4
Sc20g0007150 Simmondsia chinensis HOM05D006830 ORTHO05D008119 1.4e-12 78.6 298 25.8
Gohir.A09G213672 Gossypium hirsutum HOM05D006830 ORTHO05D008119 3.2e-12 77.4 140 42.1
Nn5g26811 Nelumbo nucifera HOM05D006830 ORTHO05D008119 3.2e-12 77.4 125 42.4
Sabra04G0154900 Salix brachista HOM05D006830 ORTHO05D008119 3.2e-12 77.4 60 70.0
TPR.G24307 Trifolium pratense HOM05D006830 ORTHO05D008119 3.2e-12 77.4 101 47.5
Phvul.008G080600 Phaseolus vulgaris HOM05D006830 ORTHO05D008119 5.4e-12 76.6 100 54.0
VMungo1383G1745 Vigna mungo HOM05D006830 ORTHO05D008119 5.4e-12 76.6 122 47.5
Gohir.D09G215500 Gossypium hirsutum HOM05D006830 ORTHO05D008119 7.0e-12 76.3 128 36.7
Ca_07782_v3 Cicer arietinum L. HOM05D006830 ORTHO05D008119 9.2e-12 75.9 87 49.4
Duzib268G1795 Durio zibethinus HOM05D006830 ORTHO05D008119 9.2e-12 75.9 121 47.1
Hma1.2p1_0537F.1_g174220 Hydrangea macrophylla HOM05D006830 ORTHO05D008119 9.2e-12 75.9 62 67.7
Solyc09g016940.4 Solanum lycopersicum HOM05D006830 ORTHO05D008119 9.2e-12 75.9 68 63.2
Zm00001eb015900 Zea mays HOM05D006830 ORTHO05D008119 9.2e-12 75.9 59 67.8
FAN02G1118 Fragaria x ananassa HOM05D006830 ORTHO05D008119 1.6e-11 75.1 126 42.9
Medtr7g073700 Medicago truncatula HOM05D006830 ORTHO05D008119 2.0e-11 74.7 62 64.5
Thecc.04G149300 Theobroma cacao HOM05D006830 ORTHO05D008119 2.0e-11 74.7 248 30.2
Actinidia29020 Actinidia chinensis HOM05D006830 ORTHO05D008119 2.7e-11 74.3 311 27.3
COL.COLO4_21252 Corchorus olitorius HOM05D006830 ORTHO05D008119 2.7e-11 74.3 59 67.8
FAN05G1111 Fragaria x ananassa HOM05D006830 ORTHO05D008119 2.7e-11 74.3 115 44.3
FvH4_6g09531 Fragaria vesca HOM05D006830 ORTHO05D008119 3.5e-11 73.9 125 41.6
FAN14G4211 Fragaria x ananassa HOM05D006830 ORTHO05D008119 3.5e-11 73.9 125 41.6
MBI15_g32284_MAGBIO Magnolia biondii HOM05D006830 ORTHO05D008119 3.5e-11 73.9 72 61.1
Sopen09g010200 Solanum pennellii HOM05D006830 ORTHO05D008119 4.6e-11 73.6 140 38.6
Lj1g0026994 Lotus japonicus HOM05D006830 ORTHO05D008119 6.0e-11 73.2 86 50.0
Hund03691 Selenicereus undatus HOM05D006830 ORTHO05D008119 7.8e-11 72.8 94 47.9
FAN09G0658 Fragaria x ananassa HOM05D006830 ORTHO05D008119 1.0e-10 72.4 302 27.8
HanXRQChr01g0000521 Helianthus annuus HOM05D006830 ORTHO05D008119 1.7e-10 71.6 78 52.6
ECA248G1589 Erigeron canadensis HOM05D006830 ORTHO05D008119 2.3e-10 71.2 84 57.1
Migut.J00020 Erythranthe guttata HOM05D006830 ORTHO05D008119 3.0e-10 70.9 119 40.3
Cpa.g.sc72.63 Carica papaya HOM05D006830 ORTHO05D008119 5.0e-10 70.1 131 43.5
CSS0029082 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 1.5e-09 68.6 95 46.3
Duzib151G0823 Durio zibethinus HOM05D006830 ORTHO05D008119 1.5e-09 68.6 118 38.1
Lsat_1_v5_gn_5_151701 Lactuca sativa HOM05D006830 ORTHO05D008119 1.5e-09 68.6 68 58.8
Rhsim05G0232400 Rhododendron simsii HOM05D006830 ORTHO05D008119 1.5e-09 68.6 60 63.3
THA.LOC104806205 Tarenaya hassleriana HOM05D006830 ORTHO05D008119 1.5e-09 68.6 114 38.6
HPP92_012541 Vanilla planifolia HOM05D006830 ORTHO05D008119 1.9e-09 68.2 62 58.1
BcaC01g05528 Brassica carinata HOM05D006830 ORTHO05D008119 2.5e-09 67.8 58 60.3
A03p21400 Brassica napus HOM05D006830 ORTHO05D008119 2.5e-09 67.8 140 36.4
Carub.0004s2057 Capsella rubella HOM05D006830 ORTHO05D008119 2.5e-09 67.8 249 27.3
BraA03t11375Z Brassica rapa HOM05D006830 ORTHO05D008119 3.3e-09 67.4 141 36.2
CDE04G1359 Ceratophyllum demersum HOM05D006830 ORTHO05D008119 5.6e-09 66.6 64 53.1
Sp4g20920 Schrenkiella parvula HOM05D006830 ORTHO05D008119 5.6e-09 66.6 137 35.8
C03p25270 Brassica napus HOM05D006830 ORTHO05D008119 7.3e-09 66.2 140 35.7
BolC3t14921H Brassica oleracea HOM05D006830 ORTHO05D008119 7.3e-09 66.2 140 35.7
Aa31LG5G23390 Aethionema arabicum HOM05D006830 ORTHO05D008119 1.2e-08 65.5 109 44.0
BcaB01g03674 Brassica carinata HOM05D006830 ORTHO05D008119 1.2e-08 65.5 137 35.0
C03p25310 Brassica napus HOM05D006830 ORTHO05D008119 1.2e-08 65.5 58 58.6
ClCG10G022820 Citrullus lanatus HOM05D006830 ORTHO05D008119 1.2e-08 65.5 63 60.3
HPP92_012572 Vanilla planifolia HOM05D006830 ORTHO05D008119 1.2e-08 65.5 62 56.5
SGA_v2.0_scaffold85G26596 Striga asiatica HOM05D006830 ORTHO05D008119 1.6e-08 65.1 57 61.4
CARHR133260 Cardamine hirsuta HOM05D006830 ORTHO05D008119 2.1e-08 64.7 141 34.8
AL4G35860 Arabidopsis lyrata HOM05D006830 ORTHO05D008119 4.7e-08 63.5 134 35.1
AT2G38580 Arabidopsis thaliana HOM05D006830 ORTHO05D008119 6.2e-08 63.2 97 42.3
Sed0004389 Sechium edule HOM05D006830 ORTHO05D008119 8.0e-08 62.8 96 46.9
Os03g0333000 Oryza sativa ssp. japonica HOM05D006830 ORTHO05D008119 1.8e-07 61.6 61 54.1
DCAR_023967 Daucus carota HOM05D006830 ORTHO05D008119 2.3e-07 61.2 113 37.2
Nitab4.5_0001876g0080 Nicotiana tabacum HOM05D006830 ORTHO05D008119 5.2e-07 60.1 113 39.8
MELO3C009096.2 Cucumis melo HOM05D006830 ORTHO05D008119 6.8e-07 59.7 292 27.1
Thhalv10016585m.g Eutrema salsugineum HOM05D006830 ORTHO05D008119 8.9e-07 59.3 250 26.4
CsaV3_3G032990 Cucumis sativus L. HOM05D006830 ORTHO05D008119 2.6e-06 57.8 292 22.6
unitig_22.g6617 Utricularia gibba HOM05D006830 ORTHO05D008119 2.6e-06 57.8 55 54.5


User provided reference genes

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