Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G1408 Cannabis sativa HOM05D001705 ORTHO05D008928 6.6e-51 203.8 103 100.0
CANSAT21G2117 Cannabis sativa HOM05D001705 ORTHO05D008928 6.6e-51 203.8 103 100.0
Phvul.L001622 Phaseolus vulgaris HOM05D001705 ORTHO05D008928 1.8e-32 142.5 103 67.0
CiPaw.10G112700 Carya illinoinensis HOM05D001705 ORTHO05D008928 4.0e-32 141.4 103 67.0
Medtr3g008540 Medicago truncatula HOM05D001705 ORTHO05D008928 5.2e-32 141.0 103 68.0
Actinidia29374 Actinidia chinensis HOM05D001705 ORTHO05D008928 8.9e-32 140.2 95 71.6
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 2.6e-31 138.7 104 66.3
Rhsim12G0002800 Rhododendron simsii HOM05D001705 ORTHO05D008928 2.6e-31 138.7 87 77.0
Lj3g0021440 Lotus japonicus HOM05D001705 ORTHO05D008928 4.4e-31 137.9 103 66.0
Dinv22114 Davidia involucrata HOM05D001705 ORTHO05D008928 5.8e-31 137.5 100 66.0
VMungo1080G1609 Vigna mungo HOM05D001705 ORTHO05D008928 5.8e-31 137.5 91 73.6
CiPaw.03G013900 Carya illinoinensis HOM05D001705 ORTHO05D008928 7.5e-31 137.1 103 63.1
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 9.9e-31 136.7 104 65.4
Dinv37409 Davidia involucrata HOM05D001705 ORTHO05D008928 9.9e-31 136.7 103 65.0
RcHm_v2.0_Chr6g0251131 Rosa chinensis HOM05D001705 ORTHO05D008928 9.9e-31 136.7 100 68.0
Haze_13961 Corylus avellana HOM05D001705 ORTHO05D008953 1.3e-30 136.3 102 63.7
Prupe.8G006600 Prunus persica HOM05D001705 ORTHO05D008928 1.3e-30 136.3 100 68.0
Manes.03G079500 Manihot esculenta HOM05D001705 ORTHO05D008928 1.7e-30 136.0 100 64.0
vmacro00942 Vaccinium macrocarpon HOM05D001705 ORTHO05D008928 2.2e-30 135.6 87 75.9
EL10Ac8g18938 Beta vulgaris HOM05D001705 ORTHO05D008928 2.9e-30 135.2 91 70.3
FvH4_2g00750 Fragaria vesca HOM05D001705 ORTHO05D008928 3.7e-30 134.8 100 66.0
FAN24G2035 Fragaria x ananassa HOM05D001705 ORTHO05D008928 3.7e-30 134.8 100 66.0
FAN27G0168 Fragaria x ananassa HOM05D001705 ORTHO05D008928 3.7e-30 134.8 100 66.0
Glyma.06G321300 Glycine max HOM05D001705 ORTHO05D008928 3.7e-30 134.8 103 66.0
Duzib106G1039 Durio zibethinus HOM05D001705 ORTHO05D008928 6.4e-30 134.0 103 63.1
MD10G1004200 Malus domestica HOM05D001705 ORTHO05D008928 6.4e-30 134.0 100 69.0
QL07p031108 Quercus lobata HOM05D001705 ORTHO05D008928 6.4e-30 134.0 102 64.7
Cfa008073 Carpinus fangiana HOM05D001705 ORTHO05D008928 8.3e-30 133.7 103 63.1
Thecc.08G179500 Theobroma cacao HOM05D001705 ORTHO05D008928 8.3e-30 133.7 100 64.0
TAR628G0577 Trochodendron aralioides HOM05D001705 ORTHO05D008928 1.1e-29 133.3 101 63.4
AUR62025342 Chenopodium quinoa HOM05D001705 ORTHO05D008928 1.4e-29 132.9 91 69.2
COL.COLO4_25141 Corchorus olitorius HOM05D001705 ORTHO05D008928 1.4e-29 132.9 100 65.0
Psat5g227400 Pisum sativum HOM05D001705 ORTHO05D008928 2.4e-29 132.1 91 71.4
Lalb_Chr15g0079721 Lupinus albus HOM05D001705 ORTHO05D008928 3.2e-29 131.7 88 68.2
QL07p047839 Quercus lobata HOM05D001705 ORTHO05D008928 3.2e-29 131.7 102 62.7
Sabra19G0082700 Salix brachista HOM05D001705 ORTHO05D008928 3.2e-29 131.7 100 65.0
GSVIVG01036284001 Vitis vinifera HOM05D001705 ORTHO05D008928 3.2e-29 131.7 102 63.7
TAR376G0455 Trochodendron aralioides HOM05D001705 ORTHO05D008928 7.1e-29 130.6 102 66.7
Potri.019G070801 Populus trichocarpa HOM05D001705 ORTHO05D008928 9.2e-29 130.2 100 64.0
AUR62028345 Chenopodium quinoa HOM05D001705 ORTHO05D008928 1.2e-28 129.8 103 61.2
MD05G1003200 Malus domestica HOM05D001705 ORTHO05D008928 1.2e-28 129.8 100 66.0
Gohir.A06G168000 Gossypium hirsutum HOM05D001705 ORTHO05D008928 1.6e-28 129.4 82 74.4
Gohir.D06G175400 Gossypium hirsutum HOM05D001705 ORTHO05D008928 1.6e-28 129.4 82 74.4
Gorai.010G205800 Gossypium raimondii HOM05D001705 ORTHO05D008928 1.6e-28 129.4 82 74.4
Atru.chr3.1320 Acer truncatum HOM05D001705 ORTHO05D008928 2.1e-28 129.0 100 64.0
arahy.Tifrunner.gnm1.ann1.X4BGNP Arachis hypogaea HOM05D001705 ORTHO05D008928 2.1e-28 129.0 88 68.2
TWI81G0898 Tripterygium wilfordii HOM05D001705 ORTHO05D008928 2.7e-28 128.6 97 64.9
Ah.13g075530 Amaranthus hybridus HOM05D001705 ORTHO05D008928 4.6e-28 127.9 95 64.2
ClCG08G000770 Citrullus lanatus HOM05D001705 ORTHO05D008928 4.6e-28 127.9 104 63.5
Ciclev10022992m.g Citrus clementina HOM05D001705 ORTHO05D008928 4.6e-28 127.9 100 62.0
Aqoxy1G00582 Aquilegia oxysepala HOM05D001705 ORTHO05D008928 6.0e-28 127.5 86 68.6
MSTRG.5080 Avicennia marina HOM05D001705 ORTHO05D008928 7.8e-28 127.1 97 61.9
DCAR_003512 Daucus carota HOM05D001705 ORTHO05D008928 7.8e-28 127.1 88 70.5
Hma1.2p1_0238F.1_g099670 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 7.8e-28 127.1 88 67.0
Lj3g0024983 Lotus japonicus HOM05D001705 ORTHO05D008928 7.8e-28 127.1 103 63.1
Sed0017068 Sechium edule HOM05D001705 ORTHO05D008928 7.8e-28 127.1 92 68.5
Migut.C01384 Erythranthe guttata HOM05D001705 ORTHO05D008928 1.0e-27 126.7 88 67.0
HanXRQChr01g0026311 Helianthus annuus HOM05D001705 ORTHO05D008928 1.0e-27 126.7 97 61.9
MBI06_g14319_MAGBIO Magnolia biondii HOM05D001705 ORTHO05D008928 1.3e-27 126.3 88 65.9
Eucgr.F02944 Eucalyptus grandis HOM05D001705 ORTHO05D008928 1.7e-27 125.9 88 67.0
Peaxi162Scf00078g00076 Petunia axillaris HOM05D001705 ORTHO05D008928 2.3e-27 125.6 87 69.0
Cpa.g.sc21.88 Carica papaya HOM05D001705 ORTHO05D008928 3.0e-27 125.2 86 67.4
CDE11G0405 Ceratophyllum demersum HOM05D001705 ORTHO05D008928 3.0e-27 125.2 102 61.8
Hma1.2p1_2213F.1_g317220 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 3.0e-27 125.2 102 57.8
CAN.G836.15 Capsicum annuum HOM05D001705 ORTHO05D008928 8.6e-27 123.6 100 60.0
PGR044G0661 Punica granatum HOM05D001705 ORTHO05D008928 1.1e-26 123.2 103 59.2
Lsat_1_v5_gn_1_56320 Lactuca sativa HOM05D001705 ORTHO05D008928 1.9e-26 122.5 89 64.0
PGSC0003DMG400010036 Solanum tuberosum HOM05D001705 ORTHO05D008928 3.3e-26 121.7 100 60.0
ECA248G1877 Erigeron canadensis HOM05D001705 ORTHO05D008928 4.3e-26 121.3 88 64.8
Nitab4.5_0003432g0050 Nicotiana tabacum HOM05D001705 ORTHO05D008928 4.3e-26 121.3 100 60.0
Nitab4.5_0007940g0020 Nicotiana tabacum HOM05D001705 ORTHO05D008928 4.3e-26 121.3 105 58.1
SalBow7G0612 Salvia bowleyana HOM05D001705 ORTHO05D008928 4.3e-26 121.3 89 64.0
Sopen02g034700 Solanum pennellii HOM05D001705 ORTHO05D008928 4.3e-26 121.3 87 66.7
unitig_8.g4896 Utricularia gibba HOM05D001705 ORTHO05D008928 4.3e-26 121.3 88 62.5
BcaB01g01450 Brassica carinata HOM05D001705 ORTHO05D008928 7.3e-26 120.6 101 57.4
Nn6g34378 Nelumbo nucifera HOM05D001705 ORTHO05D008928 7.3e-26 120.6 101 58.4
CsaV3_5G039950 Cucumis sativus L. HOM05D001705 ORTHO05D008928 9.5e-26 120.2 82 70.7
THA.LOC104815816 Tarenaya hassleriana HOM05D001705 ORTHO05D008928 9.5e-26 120.2 92 59.8
AT4G10100 Arabidopsis thaliana HOM05D001705 ORTHO05D008928 1.2e-25 119.8 87 63.2
Aa31LG9G11900 Aethionema arabicum HOM05D001705 ORTHO05D008928 1.6e-25 119.4 100 57.0
BcaC04g21016 Brassica carinata HOM05D001705 ORTHO05D008928 2.1e-25 119.0 89 60.7
A09p28840 Brassica napus HOM05D001705 ORTHO05D008928 2.1e-25 119.0 89 60.7
C09p36640 Brassica napus HOM05D001705 ORTHO05D008928 2.1e-25 119.0 89 60.7
BolC9t56496H Brassica oleracea HOM05D001705 ORTHO05D008928 2.1e-25 119.0 89 60.7
BraA09t38446Z Brassica rapa HOM05D001705 ORTHO05D008928 2.1e-25 119.0 89 60.7
Sc18g0002990 Simmondsia chinensis HOM05D001705 ORTHO05D008928 2.1e-25 119.0 88 67.0
Carub.0006s2867 Capsella rubella HOM05D001705 ORTHO05D008928 3.6e-25 118.2 83 63.9
MELO3C022174.2 Cucumis melo HOM05D001705 ORTHO05D008928 3.6e-25 118.2 82 68.3
PSO339G0564 Papaver somniferum HOM05D001705 ORTHO05D008928 6.2e-25 117.5 92 67.4
BcaB04g18852 Brassica carinata HOM05D001705 ORTHO05D008928 1.8e-24 115.9 81 64.2
CARHR261140 Cardamine hirsuta HOM05D001705 ORTHO05D008928 1.8e-24 115.9 88 60.2
Thhalv10029346m.g Eutrema salsugineum HOM05D001705 ORTHO05D008928 1.8e-24 115.9 83 63.9
Sp6g07460 Schrenkiella parvula HOM05D001705 ORTHO05D008928 1.8e-24 115.9 92 60.9
Zm00001eb244080 Zea mays HOM05D001705 ORTHO05D008928 1.8e-24 115.9 88 60.2
AL6G43910 Arabidopsis lyrata HOM05D001705 ORTHO05D008928 3.1e-24 115.2 87 59.8
BcaB05g23921 Brassica carinata HOM05D001705 ORTHO05D008928 3.1e-24 115.2 82 63.4
Zm00001eb182270 Zea mays HOM05D001705 ORTHO05D008928 6.8e-24 114.0 90 57.8
ATR0757G218 Amborella trichopoda HOM05D001705 ORTHO05D008928 1.5e-23 112.8 84 61.9
VMungo0464G0569 Vigna mungo HOM05D001705 ORTHO05D008928 1.5e-23 112.8 89 62.9
Os02g0558300 Oryza sativa ssp. japonica HOM05D001705 ORTHO05D008928 7.6e-23 110.5 77 67.5
SEGI_06051 Sequoiadendron giganteum HOM05D001705 ORTHO05D008928 4.9e-22 107.8 88 55.7
HPP92_013556 Vanilla planifolia HOM05D001705 ORTHO05D008928 6.4e-22 107.5 100 52.0
ATR1089G014 Amborella trichopoda HOM05D001705 ORTHO05D008928 2.7e-20 102.1 84 57.1
SMO119G0349 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 1.7e-19 99.4 86 50.0
SMO178G0001 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 1.1e-18 96.7 86 48.8
SHI16716 Sapria himalayana HOM05D001705 ORTHO05D008928 4.3e-18 94.7 98 49.0
Mapoly0053s0105 Marchantia polymorpha HOM05D001705 ORTHO05D008928 2.8e-17 92.0 82 57.3
Pp3c24_14090 Physcomitrium patens HOM05D001705 ORTHO05D008928 6.2e-17 90.9 81 48.1
Solyc02g090010.3 Solanum lycopersicum HOM05D001705 ORTHO05D008928 5.3e-16 87.8 62 66.1
Cre08.g382545 Chlamydomonas reinhardtii HOM05D001705 ORTHO05D008928 6.0e-12 74.3 84 42.9
BolC2t10291H Brassica oleracea HOM05D001705 ORTHO05D008928 6.6e-11 70.9 68 47.1
CBR_g41370 Chara braunii HOM05D001705 ORTHO05D008928 1.5e-10 69.7 82 37.8
MCO06G125 Micromonas commoda HOM05D001705 ORTHO05D008928 5.6e-10 67.8 84 42.9
CBR_g5690 Chara braunii HOM05D001705 ORTHO05D008928 1.4e-08 63.2 80 38.8
PRCOL_00000441 Prasinoderma coloniale HOM05D000415 ORTHO05D002017 1.7e-06 56.2 92 37.0


User provided reference genes

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