Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G1376 Cannabis sativa HOM05D002180 ORTHO05D001339 0.0e+00 1954.5 994 100.0
Lj7C284T2 Lonicera japonica HOM05D002180 ORTHO05D001339 4.9e-34 151.0 394 26.6
Lj5A834G28 Lonicera japonica HOM05D002180 ORTHO05D001339 4.1e-33 147.9 470 24.9
Lj3C720T16 Lonicera japonica HOM05D002180 ORTHO05D001339 5.4e-33 147.5 506 25.1
Lj2C907T4 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-32 146.0 547 25.8
Lj3C1002T15 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-32 146.0 471 25.1
Lj3C270T6 Lonicera japonica HOM05D002180 ORTHO05D001339 3.9e-31 141.4 437 25.2
Lj3C303G1 Lonicera japonica HOM05D002180 ORTHO05D001339 3.9e-31 141.4 419 23.4
Lj8A607T65 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-30 139.4 425 24.0
Lj6C448T6 Lonicera japonica HOM05D002180 ORTHO05D001339 1.9e-30 139.0 412 26.7
Lj1A1036T17 Lonicera japonica HOM05D002180 ORTHO05D001339 3.3e-30 138.3 392 25.8
Lj2C7T4 Lonicera japonica HOM05D002180 ORTHO05D001339 4.3e-30 137.9 460 25.7
Lj5C600G1 Lonicera japonica HOM05D002180 ORTHO05D003085 9.5e-30 136.7 418 23.4
Lj6A524T43 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-29 136.0 386 25.6
Lj6C461T8 Lonicera japonica HOM05D002180 ORTHO05D001339 2.1e-29 135.6 506 24.5
Lj1A438T30 Lonicera japonica HOM05D002180 ORTHO05D001339 4.7e-29 134.4 425 22.4
Lj1A354T50 Lonicera japonica HOM05D002180 ORTHO05D001339 6.2e-29 134.0 411 26.3
Lj2C1035G10 Lonicera japonica HOM05D002180 ORTHO05D001339 8.1e-29 133.7 409 22.5
Lj1C294T1 Lonicera japonica HOM05D002180 ORTHO05D001339 4.0e-28 131.3 403 23.8
Lj6C103T11 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-27 129.4 456 23.0
Lj7A477T78 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-26 126.3 525 22.9
Lj8P495T20 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-26 126.3 446 24.7
Lj7C704T20 Lonicera japonica HOM05D002180 ORTHO05D001339 2.9e-26 125.2 419 22.0
Lj7C583T16 Lonicera japonica HOM05D002180 ORTHO05D001339 3.7e-26 124.8 452 23.9
Lj7C629T7 Lonicera japonica HOM05D002180 ORTHO05D001339 6.4e-26 124.0 377 25.7
Lj8C523G12 Lonicera japonica HOM05D002180 ORTHO05D001339 3.5e-24 118.2 363 25.6
Lj7C452G9 Lonicera japonica HOM05D002180 ORTHO05D001339 2.3e-23 115.5 408 22.1
Lj5C655G9 Lonicera japonica HOM05D002180 ORTHO05D001339 3.9e-23 114.8 400 22.5
Lj2A800T17 Lonicera japonica HOM05D002180 ORTHO05D001339 5.1e-23 114.4 350 24.3
Lj2C800T8 Lonicera japonica HOM05D002180 ORTHO05D001339 3.3e-22 111.7 408 21.8
Lj3C276T1 Lonicera japonica HOM05D009066 ORTHO05D001339 5.6e-22 110.9 403 23.3
Lj1A337T22 Lonicera japonica HOM05D000561 ORTHO05D001339 9.5e-22 110.2 251 28.3
Lj2C1001T2 Lonicera japonica HOM05D002180 ORTHO05D001339 9.5e-22 110.2 403 20.1
Lju432C3G2 Lonicera japonica HOM05D002180 ORTHO05D001339 9.5e-22 110.2 292 26.0
Prupe.4G281000 Prunus persica HOM05D002180 ORTHO05D001339 1.6e-21 109.4 414 22.9
Lj2P950T16 Lonicera japonica HOM05D002180 ORTHO05D001339 2.1e-21 109.0 159 34.0
Lju432C4T3 Lonicera japonica HOM05D002180 ORTHO05D001339 2.8e-21 108.6 156 30.8
Lj5C665G8 Lonicera japonica HOM05D002180 ORTHO05D001339 3.6e-21 108.2 178 31.5
Lju41C13G9 Lonicera japonica HOM05D002180 ORTHO05D001339 3.6e-21 108.2 463 21.4
Lj6A103G52 Lonicera japonica HOM05D002180 ORTHO05D001339 4.7e-21 107.8 238 26.1
Lj7C160G16 Lonicera japonica HOM05D000219 ORTHO05D004649 8.1e-21 107.1 408 22.3
Lju41A59G27 Lonicera japonica HOM05D002180 ORTHO05D001339 3.1e-20 105.1 407 23.6
Lj1P545T41 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-19 102.8 342 27.5
Lj1C27T4 Lonicera japonica HOM05D002180 ORTHO05D001339 4.4e-19 101.3 224 26.8
Lj2C818T1 Lonicera japonica HOM05D002180 ORTHO05D001339 4.4e-19 101.3 247 27.1
Lj4C429T0 Lonicera japonica HOM05D002180 ORTHO05D001339 5.8e-19 100.9 157 32.5
Lj6P572T28 Lonicera japonica HOM05D002180 ORTHO05D001339 7.6e-19 100.5 244 27.9
Lj7C117G7 Lonicera japonica HOM05D002180 ORTHO05D001339 7.6e-19 100.5 241 28.2
Lju110A3T19 Lonicera japonica HOM05D002180 ORTHO05D001339 7.6e-19 100.5 182 29.1
Lj5C270G4 Lonicera japonica HOM05D001829 ORTHO05D001339 9.9e-19 100.1 190 26.8
Lj2C47T11 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-18 99.8 390 21.0
Lj1A1205G56 Lonicera japonica HOM05D002180 ORTHO05D001339 4.9e-18 97.8 346 21.4
MELO3C004331.2 Cucumis melo HOM05D007588 ORTHO05D001339 6.4e-18 97.4 360 19.4
Lj6A393T51 Lonicera japonica HOM05D002180 ORTHO05D001339 8.4e-18 97.1 229 26.2
Lj1C335T7 Lonicera japonica HOM05D009066 ORTHO05D001339 1.1e-17 96.7 181 29.3
Lj3C921G6 Lonicera japonica HOM05D002180 ORTHO05D001339 1.9e-17 95.9 478 22.2
Lj4C817G2 Lonicera japonica HOM05D002180 ORTHO05D001339 4.1e-17 94.7 131 29.8
Lj3C63T0 Lonicera japonica HOM05D009066 ORTHO05D001339 1.2e-16 93.2 181 28.2
Sed0005938 Sechium edule HOM05D007588 ORTHO05D001339 1.2e-16 93.2 391 20.5
Lju1819C2G19 Lonicera japonica HOM05D001942 ORTHO05D001996 2.1e-16 92.4 131 30.5
Lj1C6T4 Lonicera japonica HOM05D009066 ORTHO05D001339 2.7e-16 92.0 190 28.9
Lj6P507T14 Lonicera japonica HOM05D002180 ORTHO05D001339 6.0e-16 90.9 140 31.4
CSS0000405 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 1.0e-15 90.1 173 30.6
Lju1295C2G0 Lonicera japonica HOM05D002180 ORTHO05D001339 2.3e-15 89.0 210 29.0
MELO3C031327.2 Cucumis melo HOM05D007588 ORTHO05D001339 5.1e-15 87.8 359 20.1
MELO3C035530.2 Cucumis melo HOM05D007588 ORTHO05D001339 5.1e-15 87.8 155 27.1
MELO3C006457.2 Cucumis melo HOM05D007588 ORTHO05D001339 8.6e-15 87.0 384 21.1
Lj2C149T2 Lonicera japonica HOM05D002180 ORTHO05D001339 8.6e-15 87.0 92 39.1
Lj4P664T25 Lonicera japonica HOM05D002180 ORTHO05D001339 8.6e-15 87.0 157 28.0
Lj5C563G0 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-14 86.7 200 27.5
MELO3C026771.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.5e-14 86.3 155 27.1
Lj2C9T6 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-14 86.3 128 33.6
Lj7A757T38 Lonicera japonica HOM05D002180 ORTHO05D001339 1.9e-14 85.9 162 30.9
Lj2A942G29 Lonicera japonica HOM05D002180 ORTHO05D001339 2.5e-14 85.5 166 27.7
MELO3C023377.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.3e-14 84.7 414 20.5
Lj3C991T5 Lonicera japonica HOM05D002180 ORTHO05D001339 5.6e-14 84.3 103 32.0
MELO3C021089.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.2e-13 83.2 159 24.5
MELO3C005552.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.6e-13 82.8 155 26.5
CSS0040560 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 2.1e-13 82.4 139 28.8
Lj2C7T5 Lonicera japonica HOM05D002180 ORTHO05D001339 2.1e-13 82.4 182 26.4
Lj7P219T9 Lonicera japonica HOM05D002180 ORTHO05D001339 4.7e-13 81.3 225 25.3
Lj8P504T15 Lonicera japonica HOM05D002180 ORTHO05D001339 6.2e-13 80.9 125 29.6
Lj3C240G1 Lonicera japonica HOM05D002180 ORTHO05D001339 8.1e-13 80.5 343 21.6
CSS0037907 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 1.8e-12 79.3 200 26.0
Lj8A191T27 Lonicera japonica HOM05D002180 ORTHO05D001339 2.4e-12 79.0 555 22.7
Lj3C635T12 Lonicera japonica HOM05D002180 ORTHO05D001339 3.1e-12 78.6 92 38.0
MELO3C025478.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.0e-12 78.2 140 27.1
Lj5A794T36 Lonicera japonica HOM05D002180 ORTHO05D001339 4.0e-12 78.2 316 23.7
Lj3P654T27 Lonicera japonica HOM05D002180 ORTHO05D001339 5.2e-12 77.8 98 30.6
Lj7C641G7 Lonicera japonica HOM05D002180 ORTHO05D001339 6.8e-12 77.4 90 36.7
MELO3C000403.2 Cucumis melo HOM05D007588 ORTHO05D001339 8.9e-12 77.0 188 23.4
MELO3C004264.2 Cucumis melo HOM05D007588 ORTHO05D001339 8.9e-12 77.0 197 24.4
Sed0018778 Sechium edule HOM05D007588 ORTHO05D001339 1.2e-11 76.6 158 25.3
ClCG06G018450 Citrullus lanatus HOM05D007588 ORTHO05D001339 1.5e-11 76.3 158 27.2
MELO3C023616.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.5e-11 76.3 153 25.5
CSS0015024 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 2.0e-11 75.9 99 32.3
Lj2A804T55 Lonicera japonica HOM05D002180 ORTHO05D001339 2.6e-11 75.5 95 33.7
Sed0008707 Sechium edule HOM05D007588 ORTHO05D001339 2.6e-11 75.5 372 20.4
Sed0017106 Sechium edule HOM05D007588 ORTHO05D001339 2.6e-11 75.5 163 23.9
MELO3C024617.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.4e-11 75.1 122 27.0
Lj1P776T18 Lonicera japonica HOM05D002180 ORTHO05D001339 3.4e-11 75.1 86 33.7
Lj3C203G4 Lonicera japonica HOM05D009066 ORTHO05D001339 3.4e-11 75.1 144 31.9
Lj2C10T1 Lonicera japonica HOM05D009066 ORTHO05D001339 4.4e-11 74.7 186 25.8
ClCG10G001990 Citrullus lanatus HOM05D007588 ORTHO05D001339 7.6e-11 73.9 127 29.1
Lj7P489T18 Lonicera japonica HOM05D002180 ORTHO05D001339 7.6e-11 73.9 115 28.7
Lj1P804T34 Lonicera japonica HOM05D002180 ORTHO05D001339 9.9e-11 73.6 112 30.4
Lj2C953T7 Lonicera japonica HOM05D002180 ORTHO05D001339 9.9e-11 73.6 424 17.9
Lj3A585T50 Lonicera japonica HOM05D002180 ORTHO05D001339 9.9e-11 73.6 105 31.4
Lj5C672T6 Lonicera japonica HOM05D002180 ORTHO05D001339 9.9e-11 73.6 131 26.7
Lj9A656G46 Lonicera japonica HOM05D002180 ORTHO05D001339 9.9e-11 73.6 303 24.1
Lj9P474T24 Lonicera japonica HOM05D009066 ORTHO05D001339 9.9e-11 73.6 95 38.9
Lj9P555T21 Lonicera japonica HOM05D002180 ORTHO05D001339 9.9e-11 73.6 82 34.1
Lj6A103G46 Lonicera japonica HOM05D002180 ORTHO05D001339 1.7e-10 72.8 85 37.6
Lj8A507T31 Lonicera japonica HOM05D002180 ORTHO05D001339 1.7e-10 72.8 97 28.9
Sed0008115 Sechium edule HOM05D007588 ORTHO05D001339 2.2e-10 72.4 170 31.2
MELO3C000406.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.9e-10 72.0 188 22.9
Sed0024011 Sechium edule HOM05D007588 ORTHO05D001339 2.9e-10 72.0 158 24.7
Lj2P420T16 Lonicera japonica HOM05D009066 ORTHO05D001339 3.8e-10 71.6 133 27.1
Lj9P310T15 Lonicera japonica HOM05D002180 ORTHO05D001339 3.8e-10 71.6 189 26.5
Sed0025559 Sechium edule HOM05D007588 ORTHO05D001339 3.8e-10 71.6 360 20.8
Lju2566C0G12 Lonicera japonica HOM05D002180 ORTHO05D001339 6.4e-10 70.9 112 27.7
Lj2C42T4 Lonicera japonica HOM05D002180 ORTHO05D001339 8.4e-10 70.5 105 31.4
Lj2P870T17 Lonicera japonica HOM05D002180 ORTHO05D001339 8.4e-10 70.5 145 29.7
Lj8C602T4 Lonicera japonica HOM05D002180 ORTHO05D001339 8.4e-10 70.5 283 23.3
PGSC0003DMG400011942 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.1e-09 70.1 73 37.0
MELO3C004043.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.4e-09 69.7 141 24.1
Lj5P610T17 Lonicera japonica HOM05D002180 ORTHO05D001339 1.4e-09 69.7 122 31.1
Lj6C285T4 Lonicera japonica HOM05D002180 ORTHO05D001339 2.4e-09 68.9 471 20.0
PSO832G0078 Papaver somniferum HOM05D002180 ORTHO05D001339 3.2e-09 68.6 152 27.0
MELO3C009067.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.2e-09 68.2 154 22.1
Lj5P198T48 Lonicera japonica HOM05D002180 ORTHO05D001339 4.2e-09 68.2 131 28.2
Lj2A1218T28 Lonicera japonica HOM05D002180 ORTHO05D001339 5.4e-09 67.8 82 36.6
MELO3C003063.2 Cucumis melo HOM05D007588 ORTHO05D001339 7.1e-09 67.4 67 40.3
PGSC0003DMG400021934 Solanum tuberosum HOM05D008877 ORTHO05D006370 7.1e-09 67.4 73 38.4
MELO3C003179.2 Cucumis melo HOM05D007588 ORTHO05D001339 9.3e-09 67.0 95 29.5
PGSC0003DMG400041897 Solanum tuberosum HOM05D008877 ORTHO05D006370 9.3e-09 67.0 73 42.5
CSS0004318 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 1.2e-08 66.6 135 24.4
MELO3C012990.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.2e-08 66.6 82 34.1
Sed0011849 Sechium edule HOM05D007588 ORTHO05D001339 1.2e-08 66.6 84 29.8
MELO3C029797.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.6e-08 66.2 95 28.4
Lj7P583T27 Lonicera japonica HOM05D002180 ORTHO05D001339 2.7e-08 65.5 102 26.5
Lj9C248G5 Lonicera japonica HOM05D002180 ORTHO05D001339 2.7e-08 65.5 84 35.7
Lj5C814G6 Lonicera japonica HOM05D002180 ORTHO05D001339 3.5e-08 65.1 127 28.3
CsaV3_5G024960 Cucumis sativus L. HOM05D007588 ORTHO05D001339 4.6e-08 64.7 337 19.3
Lj1C860G2 Lonicera japonica HOM05D002180 ORTHO05D001339 4.6e-08 64.7 132 30.3
Lj4C42T8 Lonicera japonica HOM05D002180 ORTHO05D001339 4.6e-08 64.7 165 23.0
Lj9A423T72 Lonicera japonica HOM05D009066 ORTHO05D001339 4.6e-08 64.7 89 38.2
PSO210G7745 Papaver somniferum HOM05D002180 ORTHO05D001339 4.6e-08 64.7 130 27.7
PGSC0003DMG400023316 Solanum tuberosum HOM05D008877 ORTHO05D006370 4.6e-08 64.7 76 36.8
Lj7A574G60 Lonicera japonica HOM05D003119 ORTHO05D003559 6.0e-08 64.3 86 37.2
Lj7C477T10 Lonicera japonica HOM05D002180 ORTHO05D001339 6.0e-08 64.3 153 26.8
Sed0024303 Sechium edule HOM05D007588 ORTHO05D001339 6.0e-08 64.3 128 27.3
ClCG03G008310 Citrullus lanatus HOM05D007588 ORTHO05D001339 1.0e-07 63.5 149 23.5
Lj3P194T52 Lonicera japonica HOM05D002180 ORTHO05D001339 1.0e-07 63.5 72 36.1
Lj6P285T23 Lonicera japonica HOM05D002180 ORTHO05D001339 1.0e-07 63.5 85 29.4
Lj2P897T21 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-07 63.2 83 32.5
Lj2C8G2 Lonicera japonica HOM05D002180 ORTHO05D001339 1.7e-07 62.8 84 34.5
Lj1C1063T3 Lonicera japonica HOM05D002180 ORTHO05D001339 2.3e-07 62.4 88 34.1
Lj7P754T25 Lonicera japonica HOM05D002180 ORTHO05D001339 2.3e-07 62.4 146 31.5
PGSC0003DMG400026721 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.3e-07 62.4 73 32.9
PGSC0003DMG400038517 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.3e-07 62.4 73 38.4
PGSC0003DMG400043378 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.3e-07 62.4 73 38.4
Sed0002972 Sechium edule HOM05D007588 ORTHO05D001339 3.0e-07 62.0 143 24.5
PGSC0003DMG401029166 Solanum tuberosum HOM05D008877 ORTHO05D006370 5.1e-07 61.2 71 36.6
CSS0038024 Camellia sinensis var. sinensis HOM05D003480 ORTHO05D001339 6.6e-07 60.8 71 36.6
Lj7C730T4 Lonicera japonica HOM05D002180 ORTHO05D001339 6.6e-07 60.8 80 35.0
GSVIVG01034263001 Vitis vinifera HOM05D008877 ORTHO05D007704 6.6e-07 60.8 99 29.3
PGSC0003DMG400005369 Solanum tuberosum HOM05D008877 ORTHO05D006370 8.7e-07 60.5 74 31.1
PGSC0003DMG400014630 Solanum tuberosum HOM05D008877 ORTHO05D006370 8.7e-07 60.5 176 24.4
Lj2C24T11 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-06 60.1 120 28.3
Lj6C524T10 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-06 60.1 126 27.8
Lj9A249G18 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-06 59.7 84 33.3
Dinv32194 Davidia involucrata HOM05D000121 ORTHO05D001726 1.9e-06 59.3 80 32.5
Lj6C507G2 Lonicera japonica HOM05D002180 ORTHO05D001339 1.9e-06 59.3 187 26.2
Lj7P755T15 Lonicera japonica HOM05D002180 ORTHO05D001339 2.5e-06 58.9 61 37.7
Nitab4.5_0000197g0110 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.5e-06 58.9 134 28.4
Nitab4.5_0004344g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.3e-06 58.5 134 27.6
PGSC0003DMG400023816 Solanum tuberosum HOM05D008032 ORTHO05D006370 3.3e-06 58.5 79 27.8
Lj2C8G3 Lonicera japonica HOM05D002180 ORTHO05D001339 4.3e-06 58.2 122 29.5
ClCG07G006500 Citrullus lanatus HOM05D005236 ORTHO05D006557 5.6e-06 57.8 99 30.3
Nitab4.5_0000433g0200 Nicotiana tabacum HOM05D002270 ORTHO05D002866 7.3e-06 57.4 155 25.2
Peaxi162Scf00386g00616 Petunia axillaris HOM05D001137 ORTHO05D005066 9.6e-06 57.0 74 33.8


User provided reference genes

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