Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G1370 Cannabis sativa HOM05D005356 ORTHO05D006596 2.7e-100 368.6 180 100.0
CANSAT21G1742 Cannabis sativa HOM05D005356 ORTHO05D006596 2.6e-95 352.1 173 100.0
CANSAT21G0168 Cannabis sativa HOM05D005356 ORTHO05D006596 1.9e-90 335.9 173 96.5
RcHm_v2.0_Chr1g0384641 Rosa chinensis HOM05D005356 ORTHO05D006596 1.9e-82 309.3 173 85.5
FvH4_7g34281 Fragaria vesca HOM05D005356 ORTHO05D006596 3.7e-81 305.1 173 83.8
Prupe.2G329800 Prunus persica HOM05D005356 ORTHO05D006596 8.1e-81 303.9 173 82.7
MD07G1311300 Malus domestica HOM05D005356 ORTHO05D006596 1.8e-80 302.8 171 84.8
CiPaw.05G210900 Carya illinoinensis HOM05D005356 ORTHO05D006596 6.9e-80 300.8 173 82.7
MD01G1240200 Malus domestica HOM05D005356 ORTHO05D006596 2.0e-79 299.3 171 83.6
Dinv17238 Davidia involucrata HOM05D005356 ORTHO05D006596 5.8e-79 297.7 173 82.1
Thecc.05G227000 Theobroma cacao HOM05D005356 ORTHO05D006596 5.8e-79 297.7 173 80.9
Sabra13G0065300 Salix brachista HOM05D005356 ORTHO05D006596 1.3e-78 296.6 173 82.7
CiPaw.06G037000 Carya illinoinensis HOM05D005356 ORTHO05D006596 6.5e-78 294.3 173 79.8
Manes.08G159200 Manihot esculenta HOM05D005356 ORTHO05D006596 1.4e-77 293.1 172 81.4
arahy.Tifrunner.gnm1.ann1.509DQ1 Arachis hypogaea HOM05D005356 ORTHO05D006596 2.5e-77 292.4 173 79.2
Potri.013G076100 Populus trichocarpa HOM05D005356 ORTHO05D006596 2.5e-77 292.4 173 81.5
arahy.Tifrunner.gnm1.ann1.RW14FX Arachis hypogaea HOM05D005356 ORTHO05D006596 2.1e-76 289.3 173 78.6
Atru.chr12.1818 Acer truncatum HOM05D005356 ORTHO05D006596 6.0e-76 287.7 173 79.2
Hma1.2p1_0419F.1_g149580 Hydrangea macrophylla HOM05D005356 ORTHO05D006596 1.0e-75 287.0 171 78.9
Hund11857 Selenicereus undatus HOM05D005356 ORTHO05D006596 3.0e-75 285.4 173 75.7
Medtr0172s0020 Medicago truncatula HOM05D005356 ORTHO05D006596 1.1e-74 283.5 172 77.3
TPR.G9827 Trifolium pratense HOM05D005356 ORTHO05D006596 1.5e-74 283.1 173 78.0
AUR62002252 Chenopodium quinoa HOM05D005356 ORTHO05D006596 3.3e-74 282.0 173 75.7
DCAR_009031 Daucus carota HOM05D005356 ORTHO05D006596 4.3e-74 281.6 171 79.5
Manes.09G130400 Manihot esculenta HOM05D005356 ORTHO05D006596 4.3e-74 281.6 172 76.7
Nn1g09227 Nelumbo nucifera HOM05D005356 ORTHO05D006596 1.3e-73 280.0 173 77.5
Psat0s2502g0200 Pisum sativum HOM05D005356 ORTHO05D006596 2.8e-73 278.9 172 76.2
Ciclev10031697m.g Citrus clementina HOM05D005356 ORTHO05D006596 3.7e-73 278.5 173 77.5
Gorai.004G255200 Gossypium raimondii HOM05D005356 ORTHO05D006596 4.8e-73 278.1 173 75.1
Hma1.2p1_0564F.1_g179310 Hydrangea macrophylla HOM05D005356 ORTHO05D006596 4.8e-73 278.1 171 77.2
Phvul.011G016500 Phaseolus vulgaris HOM05D005356 ORTHO05D006596 4.8e-73 278.1 173 75.1
EL10Ac3g05893 Beta vulgaris HOM05D005356 ORTHO05D006596 6.3e-73 277.7 172 75.6
Glyma.12G013400 Glycine max HOM05D005356 ORTHO05D006596 6.3e-73 277.7 173 75.7
Gohir.D08G239900 Gossypium hirsutum HOM05D005356 ORTHO05D006596 6.3e-73 277.7 173 75.1
Aqoxy1G01762 Aquilegia oxysepala HOM05D005356 ORTHO05D006596 1.4e-72 276.6 171 74.9
Gohir.A08G221634 Gossypium hirsutum HOM05D005356 ORTHO05D006596 2.4e-72 275.8 173 74.6
Sabra19G0053800 Salix brachista HOM05D005356 ORTHO05D006596 2.4e-72 275.8 190 71.6
Ca_19620_v3 Cicer arietinum L. HOM05D005356 ORTHO05D006596 4.1e-72 275.0 172 73.8
Aa31LG11G12150 Aethionema arabicum HOM05D005356 ORTHO05D006596 6.9e-72 274.2 173 72.3
COL.COLO4_32921 Corchorus olitorius HOM05D005356 ORTHO05D006596 9.0e-72 273.9 171 74.3
Gohir.A11G226000 Gossypium hirsutum HOM05D005356 ORTHO05D006596 1.5e-71 273.1 173 72.8
Nitab4.5_0002990g0020 Nicotiana tabacum HOM05D005356 ORTHO05D006596 1.5e-71 273.1 173 74.6
Migut.N03237 Erythranthe guttata HOM05D005356 ORTHO05D006596 2.0e-71 272.7 171 74.9
THA.LOC104802905 Tarenaya hassleriana HOM05D005356 ORTHO05D006596 2.0e-71 272.7 173 74.6
Gohir.D11G234600 Gossypium hirsutum HOM05D005356 ORTHO05D006596 2.6e-71 272.3 173 73.4
Gorai.007G246900 Gossypium raimondii HOM05D005356 ORTHO05D006596 2.6e-71 272.3 173 73.4
Nitab4.5_0000299g0040 Nicotiana tabacum HOM05D005356 ORTHO05D006596 2.6e-71 272.3 173 75.1
GSVIVG01024263001 Vitis vinifera HOM05D005356 ORTHO05D006596 2.6e-71 272.3 173 75.7
CAN.G2009.1 Capsicum annuum HOM05D005356 ORTHO05D006596 3.4e-71 271.9 173 74.0
Lj3g0010653 Lotus japonicus HOM05D005356 ORTHO05D006596 3.4e-71 271.9 171 73.1
Oeu030531.2 Olea europaea HOM05D005356 ORTHO05D006596 3.4e-71 271.9 171 74.9
Cc10_g12920 Coffea canephora HOM05D005356 ORTHO05D006596 4.5e-71 271.6 171 74.3
Lalb_Chr01g0000721 Lupinus albus HOM05D005356 ORTHO05D006596 4.5e-71 271.6 172 72.1
Peaxi162Scf00263g00323 Petunia axillaris HOM05D005356 ORTHO05D006596 4.5e-71 271.6 173 74.0
PGR119G0933 Punica granatum HOM05D005356 ORTHO05D006596 4.5e-71 271.6 171 76.0
TAR629G3426 Trochodendron aralioides HOM05D005356 ORTHO05D006596 7.6e-71 270.8 171 74.3
Eucgr.A02993 Eucalyptus grandis HOM05D005356 ORTHO05D006596 1.0e-70 270.4 171 73.7
BcaC03g13524 Brassica carinata HOM05D005356 ORTHO05D006596 1.3e-70 270.0 171 71.9
C02p09120 Brassica napus HOM05D005356 ORTHO05D006596 1.3e-70 270.0 171 72.5
PGR008G0003 Punica granatum HOM05D005356 ORTHO05D006596 1.3e-70 270.0 171 75.4
PGR131G0008 Punica granatum HOM05D005356 ORTHO05D006596 1.3e-70 270.0 171 75.4
TAR375G1012 Trochodendron aralioides HOM05D005356 ORTHO05D006596 1.3e-70 270.0 171 76.0
THA.LOC104820830 Tarenaya hassleriana HOM05D005356 ORTHO05D006596 1.7e-70 269.6 173 69.9
Solyc04g064720.3 Solanum lycopersicum HOM05D005356 ORTHO05D006596 2.2e-70 269.2 173 74.0
Sopen04g026680 Solanum pennellii HOM05D005356 ORTHO05D006596 2.2e-70 269.2 173 74.0
PGSC0003DMG400024812 Solanum tuberosum HOM05D005356 ORTHO05D006596 2.2e-70 269.2 173 74.0
A02p04240 Brassica napus HOM05D005356 ORTHO05D006596 3.8e-70 268.5 171 71.3
BraA02t05387Z Brassica rapa HOM05D005356 ORTHO05D006596 3.8e-70 268.5 171 71.3
ATR0369G003 Amborella trichopoda HOM05D005356 ORTHO05D006596 5.0e-70 268.1 173 71.7
Aqoxy3G04210 Aquilegia oxysepala HOM05D005356 ORTHO05D006596 5.0e-70 268.1 171 73.7
Nn3g19190 Nelumbo nucifera HOM05D005356 ORTHO05D006596 5.0e-70 268.1 173 72.8
BolC2t06824H Brassica oleracea HOM05D005356 ORTHO05D006596 1.4e-69 266.5 171 70.8
C09p59620 Brassica napus HOM05D005356 ORTHO05D006596 2.5e-69 265.8 173 71.7
BolC9t58801H Brassica oleracea HOM05D005356 ORTHO05D006596 2.5e-69 265.8 173 71.7
AUR62015463 Chenopodium quinoa HOM05D005356 ORTHO05D006596 2.5e-69 265.8 163 74.8
Sp6g26700 Schrenkiella parvula HOM05D005356 ORTHO05D006596 3.2e-69 265.4 171 69.0
CsaV3_2G035860 Cucumis sativus L. HOM05D005356 ORTHO05D006596 4.2e-69 265.0 173 71.1
Migut.C01041 Erythranthe guttata HOM05D005356 ORTHO05D006596 5.5e-69 264.6 171 71.3
BcaB08g36764 Brassica carinata HOM05D005356 ORTHO05D006596 7.2e-69 264.2 171 70.8
BcaC04g18781 Brassica carinata HOM05D005356 ORTHO05D006596 1.6e-68 263.1 173 70.5
AL6G28610 Arabidopsis lyrata HOM05D005356 ORTHO05D006596 2.7e-68 262.3 171 70.2
MSTRG.24194 Avicennia marina HOM05D005356 ORTHO05D006596 2.7e-68 262.3 173 69.9
MELO3C024754.2 Cucumis melo HOM05D005356 ORTHO05D006596 2.7e-68 262.3 173 70.5
Lsat_1_v5_gn_9_47941 Lactuca sativa HOM05D005356 ORTHO05D006596 2.7e-68 262.3 173 72.3
SalBow7G2700 Salvia bowleyana HOM05D005356 ORTHO05D006596 2.7e-68 262.3 171 70.8
CARHR195670 Cardamine hirsuta HOM05D005356 ORTHO05D006596 3.6e-68 261.9 171 69.6
AT5G17520 Arabidopsis thaliana HOM05D005356 ORTHO05D006596 6.1e-68 261.2 171 69.6
A10p21870 Brassica napus HOM05D005356 ORTHO05D006596 7.9e-68 260.8 173 69.9
BraA10t44246Z Brassica rapa HOM05D005356 ORTHO05D006596 7.9e-68 260.8 173 69.9
Sed0017544 Sechium edule HOM05D005356 ORTHO05D006596 5.1e-67 258.1 173 69.9
Sed0019262 Sechium edule HOM05D005356 ORTHO05D006596 5.1e-67 258.1 173 69.4
VMungo0647G2360 Vigna mungo HOM05D005356 ORTHO05D006596 5.1e-67 258.1 157 75.8
HanXRQChr05g0139001 Helianthus annuus HOM05D005356 ORTHO05D006596 1.1e-66 256.9 173 71.7
Os04g0602400 Oryza sativa ssp. japonica HOM05D005356 ORTHO05D006596 1.1e-66 256.9 173 69.9
PSO782G1515 Papaver somniferum HOM05D005356 ORTHO05D006596 2.5e-66 255.8 171 69.0
Carub.0006s1575 Capsella rubella HOM05D005356 ORTHO05D006596 7.4e-66 254.2 171 66.7
ECA232G1465 Erigeron canadensis HOM05D005356 ORTHO05D006596 1.3e-65 253.4 168 70.2
SalBow6G3313 Salvia bowleyana HOM05D005356 ORTHO05D006596 8.2e-65 250.8 171 67.3
FAN03G1362 Fragaria x ananassa HOM05D005356 ORTHO05D006596 1.4e-64 250.0 141 84.4
ClCG02G007870 Citrullus lanatus HOM05D005356 ORTHO05D006596 1.2e-63 246.9 202 59.9
HPP92_022764 Vanilla planifolia HOM05D005356 ORTHO05D006596 1.6e-60 236.5 169 60.9
Oeu015013.2 Olea europaea HOM05D005356 ORTHO05D006596 6.1e-60 234.6 250 51.2
MSTRG.22381 Avicennia marina HOM05D005356 ORTHO05D006596 1.8e-59 233.0 173 63.6
unitig_744.g24563 Utricularia gibba HOM05D005356 ORTHO05D006596 1.5e-55 219.9 187 57.8
A10p21860 Brassica napus HOM05D005356 ORTHO05D006596 4.5e-55 218.4 146 69.9
Actinidia33804 Actinidia chinensis HOM05D005356 ORTHO05D006596 6.5e-54 214.5 180 62.8
SEGI_37553 Sequoiadendron giganteum HOM05D005356 ORTHO05D006596 1.4e-53 213.4 171 59.6
Actinidia04557 Actinidia chinensis HOM05D005356 ORTHO05D006596 4.7e-52 208.4 144 70.1
SGA_v2.0_scaffold19G08642 Striga asiatica HOM05D005356 ORTHO05D006596 1.3e-49 200.3 131 68.7
PSO063G2098 Papaver somniferum HOM05D005356 ORTHO05D006596 1.6e-47 193.4 120 72.5
Rhsim09G0214300 Rhododendron simsii HOM05D005356 ORTHO05D006596 1.5e-45 186.8 373 35.1
Duzib177G1190 Durio zibethinus HOM05D005356 ORTHO05D006596 4.2e-45 185.3 104 83.7
Pp3c24_890 Physcomitrium patens HOM05D005356 ORTHO05D006596 7.2e-45 184.5 172 53.5
SMO012G0030 Selaginella moellendorffii HOM05D005356 ORTHO05D006596 7.2e-45 184.5 190 48.4
Mapoly0051s0014 Marchantia polymorpha HOM05D005356 ORTHO05D006596 9.4e-45 184.1 172 50.6
Thhalv10016106m.g Eutrema salsugineum HOM05D005356 ORTHO05D006596 1.2e-44 183.7 117 68.4
Lj3A883T53 Lonicera japonica HOM05D005356 ORTHO05D006596 8.0e-44 181.0 105 79.0
AagrBONN_evm.TU.Sc2ySwM_228.477 Anthoceros agrestis HOM05D005356 ORTHO05D006596 1.8e-43 179.9 171 53.2
Pp3c6_18710 Physcomitrium patens HOM05D005356 ORTHO05D006596 6.7e-43 177.9 172 48.8
Cpa.g.sc43.152 Carica papaya HOM05D005356 ORTHO05D006596 2.6e-42 176.0 113 75.2
Pp3c23_14070 Physcomitrium patens HOM05D005356 ORTHO05D006596 4.4e-42 175.3 172 53.5
Haze_00348 Corylus avellana HOM05D005356 ORTHO05D006596 1.3e-38 163.7 124 66.9
Pp3c24_840 Physcomitrium patens HOM05D005356 ORTHO05D006596 1.7e-38 163.3 150 53.3
Glyma.09G223400 Glycine max HOM05D005356 ORTHO05D006596 2.3e-35 152.9 93 75.3
SMO118G0252 Selaginella moellendorffii HOM05D005356 ORTHO05D006596 4.0e-35 152.1 124 55.6
CSS0037967 Camellia sinensis var. sinensis HOM05D005356 ORTHO05D006596 3.1e-32 142.5 76 88.2
vmacro22188 Vaccinium macrocarpon HOM05D005356 ORTHO05D006596 1.3e-30 137.1 76 84.2
CDE11G1065 Ceratophyllum demersum HOM05D005356 ORTHO05D006596 8.0e-28 127.9 173 42.2
CBR_g17686 Chara braunii HOM05D005356 ORTHO05D006596 5.0e-22 108.6 97 48.5
MBI04_g30781_MAGBIO Magnolia biondii HOM05D005356 ORTHO05D006596 5.0e-22 108.6 64 76.6
MCO10G093 Micromonas commoda HOM05D005356 ORTHO05D006596 8.0e-20 101.3 143 40.6
Sopen04g026690 Solanum pennellii HOM05D005356 ORTHO05D006596 3.9e-14 82.4 51 70.6
PRCOL_00004977 Prasinoderma coloniale HOM05D005356 ORTHO05D006596 1.5e-13 80.5 102 41.2
Cre12.g486600 Chlamydomonas reinhardtii HOM05D005356 ORTHO05D006596 5.6e-13 78.6 122 40.2


User provided reference genes

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