Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 6.3e-104 380.9 216 100.0
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 3.2e-39 166.0 165 63.0
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 1.3e-35 154.1 178 58.4
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 2.1e-35 153.3 167 63.5
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 3.6e-35 152.5 176 55.7
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 1.1e-34 151.0 177 54.8
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 4.0e-34 149.1 174 56.3
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 5.3e-34 148.7 175 59.4
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 9.0e-34 147.9 177 58.2
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 9.0e-34 147.9 178 56.7
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 2.0e-33 146.7 172 60.5
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 2.0e-33 146.7 173 56.1
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 5.8e-33 145.2 168 61.3
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 5.8e-33 145.2 180 52.8
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 7.6e-33 144.8 177 57.6
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 7.6e-33 144.8 177 54.2
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 4.9e-32 142.1 164 60.4
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 6.4e-32 141.7 150 63.3
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 1.1e-31 141.0 179 55.3
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 1.1e-31 141.0 174 57.5
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 1.1e-31 141.0 181 57.5
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 1.6e-30 137.1 175 54.3
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 2.1e-30 136.7 200 46.0
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 2.7e-30 136.3 173 53.8
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 2.7e-30 136.3 156 57.1
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 3.5e-30 136.0 177 55.9
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 3.5e-30 136.0 177 55.9
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 3.5e-30 136.0 177 55.9
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 3.5e-30 136.0 177 53.7
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 4.6e-30 135.6 177 54.8
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 7.9e-30 134.8 156 60.9
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 7.9e-30 134.8 173 52.0
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 1.0e-29 134.4 156 59.6
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 1.8e-29 133.7 177 55.4
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 2.3e-29 133.3 173 59.0
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 3.0e-29 132.9 179 46.9
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 1.9e-28 130.2 174 56.3
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 2.5e-28 129.8 173 52.0
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 3.3e-28 129.4 177 47.5
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 7.4e-28 128.3 149 61.1
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 2.8e-27 126.3 170 52.9
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 3.6e-27 125.9 179 53.6
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 8.1e-27 124.8 154 55.8
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 8.1e-27 124.8 173 52.0
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 1.1e-26 124.4 128 64.1
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 1.1e-26 124.4 173 51.4
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 1.4e-26 124.0 176 53.4
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 1.8e-26 123.6 171 52.0
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 1.8e-26 123.6 156 56.4
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 2.4e-26 123.2 178 52.2
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 3.1e-26 122.9 145 57.2
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 4.0e-26 122.5 178 51.7
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 4.0e-26 122.5 135 63.0
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 4.0e-26 122.5 174 52.3
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 6.9e-26 121.7 171 50.3
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 6.9e-26 121.7 156 53.8
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 9.0e-26 121.3 154 53.9
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 1.2e-25 120.9 156 55.1
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 1.5e-25 120.6 150 57.3
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 1.5e-25 120.6 177 49.2
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 1.5e-25 120.6 180 51.1
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 3.4e-25 119.4 178 50.0
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 5.8e-25 118.6 153 56.2
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 7.6e-25 118.2 153 55.6
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 7.6e-25 118.2 176 47.7
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 9.9e-25 117.9 176 51.7
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 1.3e-24 117.5 154 55.8
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 1.7e-24 117.1 123 64.2
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 2.2e-24 116.7 153 56.9
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 2.2e-24 116.7 155 50.3
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 2.9e-24 116.3 152 55.9
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 4.9e-24 115.5 151 57.0
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 1.9e-23 113.6 164 50.0
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 3.2e-23 112.8 177 46.9
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 3.2e-23 112.8 159 52.2
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 5.5e-23 112.1 177 48.6
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 9.3e-23 111.3 177 48.0
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 9.3e-23 111.3 135 57.0
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 1.6e-22 110.5 153 56.2
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 4.6e-22 109.0 157 49.0
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 6.0e-22 108.6 177 47.5
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 1.3e-21 107.5 102 70.6
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 2.3e-21 106.7 158 53.8
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 5.1e-21 105.5 161 45.3
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 6.7e-21 105.1 145 53.8
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 9.6e-20 101.3 87 79.3
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 1.6e-19 100.5 95 71.6
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 2.8e-19 99.8 97 72.2
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 9.0e-18 94.7 89 67.4
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 1.2e-17 94.4 82 84.1
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 4.5e-17 92.4 184 45.1
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 2.2e-16 90.1 156 48.7
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 4.9e-16 89.0 85 72.9
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 1.1e-15 87.8 158 49.4
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 1.4e-15 87.4 131 53.4
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 7.9e-14 81.6 89 66.3
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 3.9e-13 79.3 164 44.5
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 8.7e-13 78.2 90 56.7
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 7.4e-12 75.1 94 57.4
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 9.6e-12 74.7 95 52.6
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 9.6e-12 74.7 96 60.4
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 2.1e-11 73.6 83 68.7
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 2.8e-11 73.2 127 47.2


User provided reference genes

Program Settings