Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G1194 Cannabis sativa HOM05D008363 ORTHO05D010508 3.6e-163 578.2 288 100.0
Prupe.5G035100 Prunus persica HOM05D008363 ORTHO05D010508 2.4e-50 203.4 174 59.8
TWI60G0018 Tripterygium wilfordii HOM05D008363 ORTHO05D010508 3.1e-50 203.0 154 65.6
FvH4_5g22141 Fragaria vesca HOM05D008363 ORTHO05D010508 5.3e-50 202.2 178 57.9
FAN08G0799 Fragaria x ananassa HOM05D008363 ORTHO05D010508 5.3e-50 202.2 178 57.9
FAN18G1001 Fragaria x ananassa HOM05D008363 ORTHO05D010508 7.0e-50 201.8 178 57.9
FAN13G1991 Fragaria x ananassa HOM05D008363 ORTHO05D010508 1.6e-49 200.7 178 57.3
FAN04G2847 Fragaria x ananassa HOM05D008363 ORTHO05D010508 2.0e-49 200.3 178 57.9
Cpa.g.sc227.8 Carica papaya HOM05D008363 ORTHO05D010508 3.5e-49 199.5 193 54.4
RcHm_v2.0_Chr7g0209801 Rosa chinensis HOM05D008363 ORTHO05D010508 4.5e-49 199.1 170 58.2
Thecc.03G227000 Theobroma cacao HOM05D008363 ORTHO05D010508 2.5e-47 193.4 177 55.4
Ciclev10013884m.g Citrus clementina HOM05D008363 ORTHO05D010508 3.2e-47 193.0 161 57.1
Duzib084G1116 Durio zibethinus HOM05D008363 ORTHO05D010508 2.1e-46 190.3 169 55.6
PGR042G3791 Punica granatum HOM05D008363 ORTHO05D010508 8.0e-46 188.3 156 58.3
Gohir.A03G000300 Gossypium hirsutum HOM05D008363 ORTHO05D010508 6.8e-45 185.3 176 51.1
Actinidia14803 Actinidia chinensis HOM05D008363 ORTHO05D010508 8.8e-45 184.9 178 53.4
Gohir.D03G171900 Gossypium hirsutum HOM05D008363 ORTHO05D010508 8.8e-45 184.9 177 50.3
PGR031G1477 Punica granatum HOM05D008363 ORTHO05D010508 1.2e-44 184.5 196 51.0
Psat2g136320 Pisum sativum HOM05D008363 ORTHO05D010508 1.7e-43 180.6 187 50.8
CsaV3_3G001670 Cucumis sativus L. HOM05D008363 ORTHO05D010508 6.3e-43 178.7 155 55.5
Glyma.09G204700 Glycine max HOM05D008363 ORTHO05D010508 6.3e-43 178.7 184 48.4
Ca_06083_v3 Cicer arietinum L. HOM05D008363 ORTHO05D010508 1.8e-42 177.2 165 53.9
Dinv28961 Davidia involucrata HOM05D008363 ORTHO05D010508 3.1e-42 176.4 179 50.8
Duzib205G1194 Durio zibethinus HOM05D008363 ORTHO05D010508 4.1e-42 176.0 172 52.3
MD06G1034800 Malus domestica HOM05D008363 ORTHO05D010508 1.2e-41 174.5 133 65.4
Manes.15G182300 Manihot esculenta HOM05D008363 ORTHO05D010508 2.0e-41 173.7 172 50.0
Potri.001G141900 Populus trichocarpa HOM05D008363 ORTHO05D010508 6.5e-40 168.7 163 52.8
COL.COLO4_17025 Corchorus olitorius HOM05D008363 ORTHO05D010508 8.5e-40 168.3 190 45.8
MD16G1273800 Malus domestica HOM05D008363 ORTHO05D010508 8.5e-40 168.3 177 52.5
TAR636G2722 Trochodendron aralioides HOM05D008363 ORTHO05D010508 1.1e-39 167.9 173 48.0
Aqoxy5G00023 Aquilegia oxysepala HOM05D008363 ORTHO05D010508 3.2e-39 166.4 170 50.6
Migut.A01011 Erythranthe guttata HOM05D008363 ORTHO05D010508 1.2e-38 164.5 197 48.2
Hma1.2p1_0303F.1_g119070 Hydrangea macrophylla HOM05D008363 ORTHO05D010508 2.3e-37 160.2 162 50.0
Oeu006320.1 Olea europaea HOM05D008363 ORTHO05D010508 6.8e-37 158.7 167 50.9
TAR633G2165 Trochodendron aralioides HOM05D008363 ORTHO05D010508 7.0e-34 148.7 171 45.0
Cc08_g02830 Coffea canephora HOM05D008363 ORTHO05D010508 1.6e-33 147.5 183 45.4
Manes.05G195161 Manihot esculenta HOM05D008363 ORTHO05D010508 1.7e-32 144.1 180 42.8
DCAR_024961 Daucus carota HOM05D008363 ORTHO05D010508 1.1e-31 141.4 155 48.4
CSS0023279 Camellia sinensis var. sinensis HOM05D008363 ORTHO05D010508 4.7e-30 136.0 169 42.6
CSS0031173 Camellia sinensis var. sinensis HOM05D008363 ORTHO05D010508 4.7e-30 136.0 169 42.6
Potri.014G146500 Populus trichocarpa HOM05D008363 ORTHO05D010508 1.0e-29 134.8 197 41.6
DCAR_005636 Daucus carota HOM05D008363 ORTHO05D010508 2.2e-27 127.1 161 47.2
Solyc08g076887.1 Solanum lycopersicum HOM05D008363 ORTHO05D010508 3.5e-25 119.8 137 45.3
MBI18_g13989_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.2e-22 109.0 133 42.1
DCAR_008265 Daucus carota HOM05D008363 ORTHO05D010508 2.0e-20 104.0 161 37.9
ECA240G1797 Erigeron canadensis HOM05D002571 ORTHO05D002868 3.6e-14 83.2 162 34.6
AagrBONN_evm.TU.Sc2ySwM_228.2886 Anthoceros agrestis HOM05D000085 ORTHO05D001756 8.9e-13 78.6 227 29.1
Lsat_1_v5_gn_6_79301 Lactuca sativa HOM05D008363 ORTHO05D010508 1.2e-12 78.2 169 34.3
Haze_08219 Corylus avellana HOM05D008363 ORTHO05D010508 1.7e-11 74.3 195 27.2
ClCG10G001570 Citrullus lanatus HOM05D000344 ORTHO05D003292 2.2e-11 73.9 106 43.4
Glyma.01G018200 Glycine max HOM05D008363 ORTHO05D010508 1.1e-10 71.6 79 46.8
Duzib084G0653 Durio zibethinus HOM05D008363 ORTHO05D010508 4.1e-10 69.7 58 55.2
SMO239G0014 Selaginella moellendorffii HOM05D001991 ORTHO05D002030 7.1e-10 68.9 179 24.0
Dinv25219 Davidia involucrata HOM05D008363 ORTHO05D010508 9.2e-10 68.6 178 26.4
Cfa012447 Carpinus fangiana HOM05D000816 ORTHO05D010508 1.2e-09 68.2 166 29.5
SMO230G0025 Selaginella moellendorffii HOM05D001991 ORTHO05D002030 7.8e-09 65.5 128 26.6
MBI03_g20848_MAGBIO Magnolia biondii HOM05D000085 ORTHO05D009791 3.9e-08 63.2 161 26.7
Mapoly0095s0067 Marchantia polymorpha HOM05D008363 ORTHO05D010508 1.1e-07 61.6 175 28.6
MELO3C013848.2 Cucumis melo HOM05D008363 ORTHO05D010508 1.5e-07 61.2 47 53.2
Medtr5g030350 Medicago truncatula HOM05D008363 ORTHO05D010508 1.9e-07 60.8 141 32.6
CANSAT21G2494 Cannabis sativa HOM05D000085 ORTHO05D009791 3.3e-07 60.1 199 22.1
DCAR_029721 Daucus carota HOM05D000085 ORTHO05D006184 3.3e-07 60.1 164 26.2
Duzib093G0943 Durio zibethinus HOM05D000085 ORTHO05D009791 7.3e-07 58.9 158 22.8
DCAR_031504 Daucus carota HOM05D000085 ORTHO05D009791 9.5e-07 58.5 139 29.5
AagrBONN_evm.TU.Sc2ySwM_117.1415 Anthoceros agrestis HOM05D016224 ORTHO05D010508 1.6e-06 57.8 155 25.2
FvH4_2g15260 Fragaria vesca HOM05D000085 ORTHO05D009791 1.6e-06 57.8 119 26.9
FAN15G3404 Fragaria x ananassa HOM05D000085 ORTHO05D009791 1.6e-06 57.8 119 26.9
FAN27G0973 Fragaria x ananassa HOM05D000085 ORTHO05D009791 1.6e-06 57.8 119 26.9
Potri.001G224800 Populus trichocarpa HOM05D000085 ORTHO05D006184 1.6e-06 57.8 156 23.7
Aqoxy2G00032 Aquilegia oxysepala HOM05D000085 ORTHO05D006184 2.1e-06 57.4 161 24.8
MELO3C008431.2 Cucumis melo HOM05D000085 ORTHO05D009791 2.8e-06 57.0 237 21.9
MD10G1008700 Malus domestica HOM05D000085 ORTHO05D009791 3.6e-06 56.6 126 25.4
Sed0020592 Sechium edule HOM05D000085 ORTHO05D006184 3.6e-06 56.6 134 30.6
Sed0010025 Sechium edule HOM05D000085 ORTHO05D009791 4.7e-06 56.2 165 24.2
FAN24G2618 Fragaria x ananassa HOM05D000085 ORTHO05D009791 6.2e-06 55.8 60 35.0
MD05G1010000 Malus domestica HOM05D000085 ORTHO05D009791 6.2e-06 55.8 136 25.0
SalBow6G4001 Salvia bowleyana HOM05D000085 ORTHO05D009791 6.2e-06 55.8 174 25.9
COL.COLO4_07812 Corchorus olitorius HOM05D000085 ORTHO05D009791 8.1e-06 55.5 153 20.3


User provided reference genes

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