Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G1155 Cannabis sativa HOM05D002799 ORTHO05D008889 4.2e-90 334.7 174 100.0
Prupe.2G323800 Prunus persica HOM05D002799 ORTHO05D008889 4.3e-63 245.0 170 75.9
FvH4_7g33591 Fragaria vesca HOM05D002799 ORTHO05D008889 5.7e-63 244.6 169 75.1
Dinv29173 Davidia involucrata HOM05D002799 ORTHO05D008889 9.7e-63 243.8 167 76.0
FvH4_7g33580 Fragaria vesca HOM05D002799 ORTHO05D008889 9.7e-63 243.8 169 75.1
FAN10G0267 Fragaria x ananassa HOM05D002799 ORTHO05D007076 9.7e-63 243.8 169 75.7
FAN01G1859 Fragaria x ananassa HOM05D002799 ORTHO05D007076 1.3e-62 243.4 169 75.1
Rhsim03G0220500 Rhododendron simsii HOM05D000526 ORTHO05D000956 1.7e-62 243.0 169 72.8
RcHm_v2.0_Chr1g0383841 Rosa chinensis HOM05D002799 ORTHO05D008889 2.2e-62 242.7 169 74.0
FAN03G1078 Fragaria x ananassa HOM05D002799 ORTHO05D007076 3.7e-62 241.9 169 75.1
MD07G1305700 Malus domestica HOM05D002799 ORTHO05D008889 6.3e-62 241.1 170 75.9
Haze_00591 Corylus avellana HOM05D002799 ORTHO05D008889 2.6e-60 235.7 168 74.4
TAR629G0193 Trochodendron aralioides HOM05D002799 ORTHO05D008889 4.5e-60 235.0 170 70.0
Nitab4.5_0000207g0420 Nicotiana tabacum HOM05D002799 ORTHO05D008889 2.9e-59 232.3 171 68.4
CiPaw.05G237000 Carya illinoinensis HOM05D002799 ORTHO05D008889 5.0e-59 231.5 171 70.8
QL09p025834 Quercus lobata HOM05D002799 ORTHO05D008889 8.5e-59 230.7 168 72.6
CSS0012005 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 1.1e-58 230.3 170 71.2
CSS0036576 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 1.1e-58 230.3 170 71.2
Nitab4.5_0002229g0090 Nicotiana tabacum HOM05D002799 ORTHO05D008889 1.1e-58 230.3 171 67.8
Gorai.007G188000 Gossypium raimondii HOM05D002799 ORTHO05D008889 1.9e-58 229.6 170 70.0
Sopen10g002540 Solanum pennellii HOM05D002799 ORTHO05D008889 1.9e-58 229.6 171 68.4
Gohir.D11G175400 Gossypium hirsutum HOM05D002799 ORTHO05D008889 2.5e-58 229.2 170 70.0
PGSC0003DMG400024993 Solanum tuberosum HOM05D002799 ORTHO05D008889 3.2e-58 228.8 171 68.4
Thecc.04G001600 Theobroma cacao HOM05D002799 ORTHO05D008889 3.2e-58 228.8 171 69.0
Eucgr.K03383 Eucalyptus grandis HOM05D002799 ORTHO05D008889 7.2e-58 227.6 172 68.0
Gohir.A11G169200 Gossypium hirsutum HOM05D002799 ORTHO05D008889 9.4e-58 227.3 170 69.4
vmacro06499 Vaccinium macrocarpon HOM05D002799 ORTHO05D008889 9.4e-58 227.3 160 73.1
CAN.G1110.21 Capsicum annuum HOM05D002799 ORTHO05D008889 1.2e-57 226.9 171 67.8
Potri.019G048200 Populus trichocarpa HOM05D002799 ORTHO05D008889 1.2e-57 226.9 170 70.0
Sabra19G0057600 Salix brachista HOM05D002799 ORTHO05D008889 2.1e-57 226.1 170 70.6
DCAR_010548 Daucus carota HOM05D002799 ORTHO05D008889 6.1e-57 224.6 163 71.2
Manes.08G164500 Manihot esculenta HOM05D002799 ORTHO05D008889 6.1e-57 224.6 168 69.0
Sed0001745 Sechium edule HOM05D002799 ORTHO05D008889 6.1e-57 224.6 169 68.0
TWI60G0329 Tripterygium wilfordii HOM05D002799 ORTHO05D008889 1.4e-56 223.4 158 71.5
Ciclev10032834m.g Citrus clementina HOM05D002799 ORTHO05D008889 1.8e-56 223.0 166 68.7
MELO3C005426.2 Cucumis melo HOM05D002799 ORTHO05D008889 2.3e-56 222.6 171 64.3
Actinidia08736 Actinidia chinensis HOM05D002799 ORTHO05D008889 3.0e-56 222.2 166 69.3
Lalb_Chr09g0335071 Lupinus albus HOM05D002799 ORTHO05D008889 5.1e-56 221.5 169 65.1
Cc05_g12950 Coffea canephora HOM05D002799 ORTHO05D008889 6.7e-56 221.1 166 68.7
Medtr8g063470 Medicago truncatula HOM05D002799 ORTHO05D008889 5.7e-55 218.0 169 64.5
GSVIVG01024450001 Vitis vinifera HOM05D002799 ORTHO05D008889 1.7e-54 216.5 170 65.9
CsaV3_5G005340 Cucumis sativus L. HOM05D002799 ORTHO05D008889 2.8e-54 215.7 163 65.6
MSTRG.17884 Avicennia marina HOM05D002799 ORTHO05D008889 6.3e-54 214.5 171 64.9
THA.LOC104803694 Tarenaya hassleriana HOM05D002799 ORTHO05D008889 6.3e-54 214.5 169 62.7
ECA236G2689 Erigeron canadensis HOM05D002799 ORTHO05D008889 1.4e-53 213.4 167 65.9
Migut.M01834 Erythranthe guttata HOM05D002799 ORTHO05D008889 4.1e-53 211.8 170 63.5
TPR.G670 Trifolium pratense HOM05D002799 ORTHO05D008889 6.9e-53 211.1 169 62.1
arahy.Tifrunner.gnm1.ann1.LMI616 Arachis hypogaea HOM05D002799 ORTHO05D008889 1.5e-52 209.9 166 63.9
Lj1P1032T28 Lonicera japonica HOM05D002799 ORTHO05D008889 2.0e-52 209.5 155 69.0
Nn1g02011 Nelumbo nucifera HOM05D002799 ORTHO05D008889 2.6e-52 209.1 170 64.7
arahy.Tifrunner.gnm1.ann1.10QB4Z Arachis hypogaea HOM05D002799 ORTHO05D008889 5.9e-52 208.0 166 63.3
Glyma.18G134600 Glycine max HOM05D002799 ORTHO05D008889 5.9e-52 208.0 166 62.0
arahy.Tifrunner.gnm1.ann1.B4EAVD Arachis hypogaea HOM05D002799 ORTHO05D008889 7.7e-52 207.6 166 63.3
arahy.Tifrunner.gnm1.ann1.31RF02 Arachis hypogaea HOM05D002799 ORTHO05D008889 1.0e-51 207.2 166 63.3
Duzib133G0126 Durio zibethinus HOM05D002799 ORTHO05D008889 1.0e-51 207.2 159 67.9
Lsat_1_v5_gn_5_146100 Lactuca sativa HOM05D002799 ORTHO05D008889 1.3e-51 206.8 170 62.9
Oeu053393.1 Olea europaea HOM05D002799 ORTHO05D008889 1.3e-51 206.8 158 68.4
SGA_v2.0_scaffold70G23573 Striga asiatica HOM05D002799 ORTHO05D008889 2.9e-51 205.7 170 62.4
Lsat_1_v5_gn_8_74380 Lactuca sativa HOM05D002799 ORTHO05D008889 6.5e-51 204.5 171 62.0
Peaxi162Scf00257g00081 Petunia axillaris HOM05D002799 ORTHO05D008889 1.1e-50 203.8 158 66.5
VMungo0251G2787 Vigna mungo HOM05D002799 ORTHO05D008889 1.4e-50 203.4 166 62.7
unitig_746.g26651 Utricularia gibba HOM05D002799 ORTHO05D008889 1.9e-50 203.0 170 61.8
Atru.chr12.2012 Acer truncatum HOM05D002799 ORTHO05D008889 4.2e-50 201.8 182 60.4
Glyma.08G289900 Glycine max HOM05D002799 ORTHO05D008889 4.2e-50 201.8 167 61.1
Phvul.003G054200 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 9.4e-50 200.7 170 59.4
Lj4g0019925 Lotus japonicus HOM05D002799 ORTHO05D008889 8.0e-49 197.6 161 60.9
Carub.0003s3061 Capsella rubella HOM05D002799 ORTHO05D008889 1.4e-48 196.8 166 58.4
Phvul.003G053900 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 1.8e-48 196.4 170 58.2
Aa31LG8G14030 Aethionema arabicum HOM05D002799 ORTHO05D008889 1.1e-47 193.7 166 57.2
AUR62028150 Chenopodium quinoa HOM05D002799 ORTHO05D008889 1.5e-47 193.4 172 57.6
AL3G49530 Arabidopsis lyrata HOM05D002799 ORTHO05D008889 2.0e-47 193.0 170 55.9
BcaC04g23004 Brassica carinata HOM05D002799 ORTHO05D008889 2.0e-47 193.0 170 54.7
C09p13130 Brassica napus HOM05D002799 ORTHO05D008889 2.0e-47 193.0 170 54.7
BolC9t54208H Brassica oleracea HOM05D002799 ORTHO05D008889 2.0e-47 193.0 170 54.7
CARHR107040 Cardamine hirsuta HOM05D002799 ORTHO05D008889 2.6e-47 192.6 166 56.0
PSO717G0064 Papaver somniferum HOM05D002799 ORTHO05D008889 3.3e-47 192.2 189 56.6
AT2G16790 Arabidopsis thaliana HOM05D002799 ORTHO05D008889 4.4e-47 191.8 166 57.2
A09p11140 Brassica napus HOM05D002799 ORTHO05D008889 4.4e-47 191.8 170 54.1
BraA09t36756Z Brassica rapa HOM05D002799 ORTHO05D008889 9.7e-47 190.7 170 53.5
Nn3g19277 Nelumbo nucifera HOM05D002799 ORTHO05D008889 9.7e-47 190.7 156 63.5
PSO675G5486 Papaver somniferum HOM05D002799 ORTHO05D008889 1.7e-46 189.9 189 55.6
BcaB07g31750 Brassica carinata HOM05D002799 ORTHO05D008889 2.8e-46 189.1 166 56.0
EL10Ac3g05099 Beta vulgaris HOM05D002799 ORTHO05D008889 3.7e-46 188.7 172 57.0
Thhalv10022876m.g Eutrema salsugineum HOM05D002799 ORTHO05D008889 3.7e-46 188.7 167 58.1
Solyc10g006600.4 Solanum lycopersicum HOM05D002799 ORTHO05D008889 3.7e-46 188.7 130 72.3
Sp3g29930 Schrenkiella parvula HOM05D002799 ORTHO05D008889 1.4e-45 186.8 167 55.1
Ah.04g157280 Amaranthus hybridus HOM05D002799 ORTHO05D008889 2.2e-43 179.5 172 53.5
Os06g0114650 Oryza sativa ssp. japonica HOM05D002799 ORTHO05D008889 1.9e-42 176.4 168 55.4
COL.COLO4_19775 Corchorus olitorius HOM05D002799 ORTHO05D008889 7.2e-42 174.5 133 69.2
ClCG01G005050 Citrullus lanatus HOM05D002799 ORTHO05D008889 1.8e-40 169.9 135 65.2
ATR0829G224 Amborella trichopoda HOM05D002799 ORTHO05D008889 1.5e-39 166.8 189 48.7
Aqoxy7G00884 Aquilegia oxysepala HOM05D002799 ORTHO05D008889 9.7e-39 164.1 140 59.3
Mapoly0046s0106 Marchantia polymorpha HOM05D002799 ORTHO05D008889 1.7e-38 163.3 173 51.4
Psat4g127040 Pisum sativum HOM05D002799 ORTHO05D008889 1.8e-37 159.8 132 59.8
Ca_14681_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 2.4e-37 159.5 132 60.6
PGR004G1571 Punica granatum HOM05D002799 ORTHO05D008889 7.0e-37 157.9 130 63.1
TPR.G26908 Trifolium pratense HOM05D002799 ORTHO05D008889 1.2e-36 157.1 125 62.4
Sc19g0000240 Simmondsia chinensis HOM05D002799 ORTHO05D008889 1.1e-34 150.6 133 56.4
MD01G1233600 Malus domestica HOM05D002799 ORTHO05D008889 4.2e-34 148.7 92 79.3
Pp3c5_2750 Physcomitrium patens HOM05D002799 ORTHO05D008889 5.2e-32 141.7 190 44.7
AagrBONN_evm.TU.Sc2ySwM_362.1504 Anthoceros agrestis HOM05D002799 ORTHO05D008889 2.0e-31 139.8 174 43.7
SMO174G0264 Selaginella moellendorffii HOM05D002799 ORTHO05D008889 4.1e-29 132.1 163 42.3
Rhsim03G0164800 Rhododendron simsii HOM05D002799 ORTHO05D008889 5.4e-29 131.7 105 66.7
PSO675G4133 Papaver somniferum HOM05D002799 ORTHO05D008889 3.3e-26 122.5 153 47.1
SHI03438 Sapria himalayana HOM05D002799 ORTHO05D008889 3.4e-23 112.5 130 48.5
Cre08.g385750 Chlamydomonas reinhardtii HOM05D002799 ORTHO05D008889 3.7e-22 109.0 171 39.2
HPP92_002455 Vanilla planifolia HOM05D002799 ORTHO05D008889 1.6e-20 103.6 138 44.2
BcaB03g16409 Brassica carinata HOM05D002799 ORTHO05D008889 5.2e-16 88.6 107 42.1
MCO08G110 Micromonas commoda HOM05D002799 ORTHO05D008889 1.2e-15 87.4 153 36.6
C07p06790 Brassica napus HOM05D002799 ORTHO05D008889 4.4e-15 85.5 136 39.0
Cfa026682 Carpinus fangiana HOM05D002799 ORTHO05D008889 9.8e-15 84.3 149 35.6
PRCOL_00003203 Prasinoderma coloniale HOM05D002799 ORTHO05D008889 1.7e-14 83.6 172 36.0
Ca_28676_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 8.3e-14 81.3 166 31.9
HanXRQChr10g0305151 Helianthus annuus HOM05D002799 ORTHO05D008889 1.1e-10 70.9 48 66.7


User provided reference genes

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