Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 8.2e-60 233.4 109 100.0
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 6.7e-54 213.8 105 96.2
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 2.7e-47 191.8 105 81.9
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 4.7e-47 191.0 105 81.9
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 1.0e-46 189.9 105 81.0
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 1.4e-46 189.5 105 81.0
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 1.8e-46 189.1 105 79.0
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 1.8e-46 189.1 105 81.9
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 2.3e-46 188.7 102 84.3
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 3.0e-46 188.3 102 84.3
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 3.9e-46 188.0 105 79.0
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 3.9e-46 188.0 105 81.9
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 5.2e-46 187.6 105 81.0
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 5.2e-46 187.6 102 83.3
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 6.7e-46 187.2 105 80.0
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 6.7e-46 187.2 105 79.0
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 6.7e-46 187.2 105 79.0
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 1.1e-45 186.4 102 80.4
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 1.5e-45 186.0 105 79.0
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 3.3e-45 184.9 105 80.0
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 4.4e-45 184.5 102 79.4
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 4.4e-45 184.5 102 79.4
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 5.7e-45 184.1 105 78.1
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 5.7e-45 184.1 105 76.2
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 7.4e-45 183.7 105 80.0
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 7.4e-45 183.7 105 80.0
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 9.7e-45 183.3 102 82.4
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 9.7e-45 183.3 105 79.0
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 9.7e-45 183.3 105 79.0
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.3e-44 183.0 105 79.0
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 1.3e-44 183.0 105 79.0
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 1.7e-44 182.6 102 81.4
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 3.7e-44 181.4 102 80.4
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 3.7e-44 181.4 105 79.0
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 3.7e-44 181.4 105 76.2
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 8.2e-44 180.3 102 80.4
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 1.1e-43 179.9 105 77.1
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 1.4e-43 179.5 105 76.2
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 1.8e-43 179.1 102 78.4
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 2.4e-43 178.7 105 75.2
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 2.4e-43 178.7 105 75.2
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 3.1e-43 178.3 105 73.3
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 3.1e-43 178.3 105 75.2
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 4.1e-43 177.9 105 75.2
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 7.0e-43 177.2 102 79.4
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 7.0e-43 177.2 105 75.2
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 9.1e-43 176.8 105 74.3
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 1.2e-42 176.4 102 76.5
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 1.2e-42 176.4 102 76.5
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 2.0e-42 175.6 105 72.4
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 2.6e-42 175.3 105 73.3
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 3.5e-42 174.9 109 72.5
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 5.9e-42 174.1 105 72.4
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 5.9e-42 174.1 105 72.4
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 7.7e-42 173.7 96 83.3
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 1.0e-41 173.3 102 75.5
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 1.0e-41 173.3 105 72.4
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 1.3e-41 172.9 102 74.5
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 2.2e-41 172.2 102 75.5
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 3.8e-41 171.4 104 72.1
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 3.8e-41 171.4 102 74.5
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 3.8e-41 171.4 105 71.4
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 5.0e-41 171.0 105 72.4
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 5.0e-41 171.0 105 72.4
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 5.0e-41 171.0 103 74.8
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 5.0e-41 171.0 103 74.8
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 5.0e-41 171.0 103 74.8
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 6.5e-41 170.6 103 74.8
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 6.5e-41 170.6 103 74.8
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 1.1e-40 169.9 102 73.5
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 1.9e-40 169.1 103 75.7
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 1.9e-40 169.1 103 73.8
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 2.5e-40 168.7 105 69.5
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 5.5e-40 167.5 106 68.9
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 7.2e-40 167.2 103 73.8
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 1.6e-39 166.0 106 71.7
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 2.7e-39 165.2 104 68.3
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 2.7e-39 165.2 105 67.6
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 3.6e-39 164.9 104 70.2
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 4.7e-39 164.5 106 71.7
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 6.1e-39 164.1 104 68.3
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 6.1e-39 164.1 103 71.8
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 1.8e-38 162.5 106 66.0
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 3.0e-38 161.8 103 68.0
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 6.7e-38 160.6 106 69.8
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 1.5e-37 159.5 105 62.9
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 2.6e-37 158.7 105 64.8
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 3.3e-37 158.3 105 61.9
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 7.5e-37 157.1 104 66.3
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 2.2e-36 155.6 108 64.8
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 2.4e-35 152.1 105 61.0
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 5.3e-35 151.0 103 68.9
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 2.0e-34 149.1 105 60.0
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 1.4e-30 136.3 95 66.3
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 4.0e-30 134.8 97 63.9
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 1.7e-28 129.4 106 58.5
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 3.1e-27 125.2 106 56.6
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 2.0e-26 122.5 98 53.1
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 7.7e-26 120.6 92 58.7
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 7.7e-26 120.6 95 55.8
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 2.9e-25 118.6 66 75.8
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 5.0e-25 117.9 98 53.1
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 1.1e-24 116.7 91 53.8
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.9e-24 115.9 85 63.5
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 5.5e-24 114.4 67 74.6
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 1.4e-22 109.8 59 76.3
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 8.9e-14 80.5 91 41.8
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 2.9e-12 75.5 43 65.1
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 4.1e-11 71.6 92 43.5
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 6.0e-10 67.8 41 70.7
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 3.3e-08 62.0 31 77.4
Nn1g06940 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.4e-06 56.6 48 58.3


User provided reference genes

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