Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G1086 Cannabis sativa HOM05D006342 ORTHO05D008155 8.0e-222 773.5 397 100.0
Prupe.8G064500 Prunus persica HOM05D006342 ORTHO05D008155 7.4e-151 537.7 393 72.3
QL11p022820 Quercus lobata HOM05D006342 ORTHO05D008155 1.3e-139 500.4 398 66.8
RcHm_v2.0_Chr2g0143381 Rosa chinensis HOM05D006342 ORTHO05D008155 8.2e-134 481.1 401 66.8
MD10G1052500 Malus domestica HOM05D006342 ORTHO05D008155 2.4e-133 479.6 399 64.9
Actinidia24004 Actinidia chinensis HOM05D006342 ORTHO05D008155 2.2e-131 473.0 402 65.2
CSS0025541 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 1.9e-130 469.9 388 65.5
CiPaw.05G033400 Carya illinoinensis HOM05D006342 ORTHO05D008155 2.5e-130 469.5 400 63.2
RhsimUnG0187900 Rhododendron simsii HOM05D006342 ORTHO05D008155 6.1e-129 464.9 419 61.1
FvH4_6g33511 Fragaria vesca HOM05D006342 ORTHO05D008155 8.0e-129 464.5 402 64.2
FAN02G0548 Fragaria x ananassa HOM05D006342 ORTHO05D008155 3.0e-128 462.6 417 61.4
Rhsim11G0137800 Rhododendron simsii HOM05D006342 ORTHO05D008155 3.9e-128 462.2 419 60.6
GSVIVG01015772001 Vitis vinifera HOM05D006342 ORTHO05D008155 2.6e-127 459.5 348 70.7
Ciclev10028615m.g Citrus clementina HOM05D006342 ORTHO05D008155 1.7e-126 456.8 361 66.2
Nitab4.5_0000863g0140 Nicotiana tabacum HOM05D006342 ORTHO05D008155 3.1e-125 452.6 389 64.3
Nn5g30026 Nelumbo nucifera HOM05D006342 ORTHO05D008155 9.1e-125 451.1 313 74.1
Peaxi162Scf01060g00128 Petunia axillaris HOM05D006342 ORTHO05D008155 1.3e-123 447.2 317 72.6
Nitab4.5_0003959g0010 Nicotiana tabacum HOM05D006342 ORTHO05D008155 1.7e-123 446.8 360 66.1
Sopen01g047960 Solanum pennellii HOM05D006342 ORTHO05D008155 2.2e-123 446.4 317 73.5
Manes.07G034700 Manihot esculenta HOM05D006342 ORTHO05D008155 6.5e-123 444.9 392 63.3
Lalb_Chr05g0217591 Lupinus albus HOM05D006342 ORTHO05D008155 1.1e-122 444.1 391 61.9
CAN.G523.45 Capsicum annuum HOM05D006342 ORTHO05D008155 1.9e-122 443.4 343 67.6
Eucgr.G00932 Eucalyptus grandis HOM05D006342 ORTHO05D008155 4.2e-122 442.2 402 59.5
TAR628G1271 Trochodendron aralioides HOM05D006342 ORTHO05D008155 5.5e-122 441.8 343 70.3
Hma1.2p1_0522F.1_g171800 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 1.2e-121 440.7 349 67.0
ECA234G3624 Erigeron canadensis HOM05D006342 ORTHO05D008155 4.7e-121 438.7 400 60.0
Oeu042410.2 Olea europaea HOM05D006342 ORTHO05D008155 4.7e-121 438.7 313 70.6
Atru.chr6.1184 Acer truncatum HOM05D006342 ORTHO05D008155 8.0e-121 438.0 388 62.9
Lj9A350G66 Lonicera japonica HOM05D006342 ORTHO05D008155 8.0e-121 438.0 355 67.3
PGSC0003DMG400012575 Solanum tuberosum HOM05D006342 ORTHO05D008155 8.0e-121 438.0 392 62.8
Dinv24174 Davidia involucrata HOM05D006342 ORTHO05D008155 1.4e-120 437.2 380 62.1
MSTRG.16600 Avicennia marina HOM05D006342 ORTHO05D008155 1.8e-120 436.8 394 59.4
Potri.017G050900 Populus trichocarpa HOM05D006342 ORTHO05D008155 1.8e-120 436.8 395 61.8
Thecc.02G134500 Theobroma cacao HOM05D006342 ORTHO05D008155 2.3e-120 436.4 309 72.8
Lj4g0023834 Lotus japonicus HOM05D006342 ORTHO05D008155 6.8e-120 434.9 410 58.8
Medtr4g094100 Medicago truncatula HOM05D006342 ORTHO05D008155 6.8e-120 434.9 402 57.7
Ca_18366_v3 Cicer arietinum L. HOM05D003001 ORTHO05D003494 2.6e-119 433.0 386 61.7
Psat7g100320 Pisum sativum HOM05D006342 ORTHO05D008155 9.7e-119 431.0 392 61.0
TWI23G0792 Tripterygium wilfordii HOM05D006342 ORTHO05D008155 2.8e-118 429.5 398 60.6
Gorai.005G222500 Gossypium raimondii HOM05D006342 ORTHO05D008155 4.8e-118 428.7 396 61.6
CsaV3_7G006740 Cucumis sativus L. HOM05D006342 ORTHO05D008155 3.1e-117 426.0 310 71.0
Duzib052G0010 Durio zibethinus HOM05D006342 ORTHO05D008155 5.3e-117 425.2 367 62.9
Gohir.D02G198600 Gossypium hirsutum HOM05D006342 ORTHO05D008155 7.0e-117 424.9 396 60.9
MELO3C018621.2 Cucumis melo HOM05D006342 ORTHO05D008155 1.2e-116 424.1 400 59.2
Gohir.A03G175100 Gossypium hirsutum HOM05D006342 ORTHO05D008155 1.2e-116 424.1 396 60.9
DCAR_003711 Daucus carota HOM05D006342 ORTHO05D008155 1.6e-116 423.7 312 69.2
Cc02_g21250 Coffea canephora HOM05D006342 ORTHO05D008155 2.7e-116 422.9 350 64.3
Sabra17G0037300 Salix brachista HOM05D006342 ORTHO05D008155 2.7e-116 422.9 349 65.9
VMungo0251G1514 Vigna mungo HOM05D006342 ORTHO05D008155 2.7e-116 422.9 392 59.7
SalBow5G5605 Salvia bowleyana HOM05D006342 ORTHO05D008155 4.5e-116 422.2 317 68.5
arahy.Tifrunner.gnm1.ann1.U7PRNJ Arachis hypogaea HOM05D006342 ORTHO05D008155 5.9e-116 421.8 316 69.6
PGR042G1699 Punica granatum HOM05D006342 ORTHO05D008155 2.9e-115 419.5 394 59.6
TPR.G35344 Trifolium pratense HOM05D006342 ORTHO05D008155 5.0e-115 418.7 303 70.0
PSO447G0017 Papaver somniferum HOM05D006342 ORTHO05D008155 6.5e-115 418.3 374 61.8
Glyma.08G070600 Glycine max HOM05D006342 ORTHO05D008155 4.2e-114 415.6 379 61.5
HanXRQChr10g0303621 Helianthus annuus HOM05D006342 ORTHO05D008155 1.6e-113 413.7 312 68.3
Migut.B00584 Erythranthe guttata HOM05D006342 ORTHO05D008155 3.6e-113 412.5 395 58.0
Lsat_1_v5_gn_5_108680 Lactuca sativa HOM05D006342 ORTHO05D008155 8.0e-113 411.4 351 64.1
SGA_v2.0_scaffold83G26327 Striga asiatica HOM05D006342 ORTHO05D008155 8.0e-113 411.4 378 59.5
Thhalv10023528m.g Eutrema salsugineum HOM05D006342 ORTHO05D008155 3.0e-112 409.5 305 70.5
AUR62010160 Chenopodium quinoa HOM05D006342 ORTHO05D008155 4.0e-112 409.1 309 67.3
Glyma.13G042800 Glycine max HOM05D006342 ORTHO05D008155 6.8e-112 408.3 391 59.1
Carub.0002s0473 Capsella rubella HOM05D006342 ORTHO05D008155 1.2e-111 407.5 305 69.5
AL2G16000 Arabidopsis lyrata HOM05D006342 ORTHO05D008155 2.0e-111 406.8 305 70.2
EL10Ac9g21517 Beta vulgaris HOM05D006342 ORTHO05D008155 4.4e-111 405.6 363 59.5
AUR62013159 Chenopodium quinoa HOM05D006342 ORTHO05D008155 5.7e-111 405.2 309 67.0
Sc15g0003050 Simmondsia chinensis HOM05D006342 ORTHO05D008155 5.7e-111 405.2 342 64.0
AT1G60600 Arabidopsis thaliana HOM05D006342 ORTHO05D008155 2.8e-110 402.9 305 69.5
BcaB04g20275 Brassica carinata HOM05D006342 ORTHO05D008155 2.4e-109 399.8 305 69.8
BolC1t03681H Brassica oleracea HOM05D006342 ORTHO05D008155 5.4e-109 398.7 306 69.9
A01p29370 Brassica napus HOM05D006342 ORTHO05D008155 7.0e-109 398.3 306 70.3
BcaC09g49390 Brassica carinata HOM05D006342 ORTHO05D008155 7.7e-108 394.8 306 69.6
C01p37160 Brassica napus HOM05D006342 ORTHO05D008155 7.7e-108 394.8 306 69.6
BraA01t03071Z Brassica rapa HOM05D006342 ORTHO05D008155 1.0e-107 394.4 306 69.0
Aa31LG2G9860 Aethionema arabicum HOM05D006342 ORTHO05D008155 5.0e-107 392.1 304 68.8
Sabra17G0042600 Salix brachista HOM05D006342 ORTHO05D008155 8.6e-107 391.3 402 57.0
Cpa.g.sc42.26 Carica papaya HOM05D006342 ORTHO05D008155 1.1e-106 391.0 279 72.4
Solyc01g105460.4 Solanum lycopersicum HOM05D006342 ORTHO05D008155 1.2e-105 387.5 353 61.8
COL.COLO4_32304 Corchorus olitorius HOM05D006342 ORTHO05D008155 2.1e-105 386.7 279 71.0
THA.LOC104799883 Tarenaya hassleriana HOM05D006342 ORTHO05D008155 4.7e-105 385.6 360 59.7
unitig_0.g609 Utricularia gibba HOM05D006342 ORTHO05D008190 4.7e-105 385.6 304 65.8
arahy.Tifrunner.gnm1.ann1.XZGJ82 Arachis hypogaea HOM05D006342 ORTHO05D008155 8.0e-105 384.8 387 58.1
ClCG09G015650 Citrullus lanatus HOM05D006342 ORTHO05D008155 8.0e-105 384.8 310 66.1
Os03g0190100 Oryza sativa ssp. japonica HOM05D006342 ORTHO05D008155 2.8e-102 376.3 304 65.1
Migut.B01155 Erythranthe guttata HOM05D006342 ORTHO05D008155 4.9e-102 375.6 310 59.7
Sabra17G0037900 Salix brachista HOM05D006342 ORTHO05D008155 8.3e-102 374.8 352 61.1
vmacro01839 Vaccinium macrocarpon HOM05D006342 ORTHO05D008155 8.3e-102 374.8 465 50.1
MSTRG.20291 Avicennia marina HOM05D006342 ORTHO05D008155 2.7e-100 369.8 409 50.1
FAN09G1871 Fragaria x ananassa HOM05D006342 ORTHO05D003187 1.3e-99 367.5 337 60.5
MBI05_g05612_MAGBIO Magnolia biondii HOM05D006342 ORTHO05D008155 1.1e-98 364.4 298 66.1
Hund06370 Selenicereus undatus HOM05D006342 ORTHO05D008155 1.9e-93 347.1 309 59.2
HPP92_019303 Vanilla planifolia HOM05D006342 ORTHO05D008155 1.2e-92 344.4 338 58.0
Mapoly0112s0045 Marchantia polymorpha HOM05D006342 ORTHO05D008155 1.6e-92 344.0 311 57.9
Pp3c15_22700 Physcomitrium patens HOM05D006342 ORTHO05D008155 7.8e-92 341.7 309 55.7
Zm00001eb006830 Zea mays HOM05D006342 ORTHO05D008155 1.3e-91 340.9 341 57.2
Oeu000253.3 Olea europaea HOM05D006342 ORTHO05D008155 2.8e-89 333.2 313 58.1
Migut.B01157 Erythranthe guttata HOM05D006342 ORTHO05D008155 1.5e-87 327.4 291 56.0
PSO210G1371 Papaver somniferum HOM05D006342 ORTHO05D008155 1.7e-86 323.9 244 70.9
SMO364G0259 Selaginella moellendorffii HOM05D006342 ORTHO05D008155 9.2e-85 318.2 282 58.9
Phvul.002G210750 Phaseolus vulgaris HOM05D006342 ORTHO05D008155 1.3e-83 314.3 300 59.0
Sed0004067 Sechium edule HOM05D006342 ORTHO05D008155 1.5e-79 300.8 219 70.3
SpUN0430_0010 Schrenkiella parvula HOM05D006342 ORTHO05D008155 7.8e-76 288.5 228 68.0
FAN14G1047 Fragaria x ananassa HOM05D000343 ORTHO05D003187 8.6e-75 285.0 344 51.2
Hma1.2p1_0522F.1_g171810 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 4.0e-72 276.2 197 71.1
QL11p022738 Quercus lobata HOM05D006342 ORTHO05D008155 6.8e-72 275.4 230 66.1
Ah.01g010100 Amaranthus hybridus HOM05D006342 ORTHO05D008155 3.5e-68 263.1 212 63.7
Haze_10585 Corylus avellana HOM05D006342 ORTHO05D008155 1.3e-67 261.2 277 55.6
AagrBONN_evm.TU.Sc2ySwM_228.424 Anthoceros agrestis HOM05D006342 ORTHO05D008155 2.8e-65 253.4 333 45.0
CBR_g45392 Chara braunii HOM05D006342 ORTHO05D008155 2.2e-62 243.8 302 46.4
AagrBONN_evm.TU.Sc2ySwM_117.3744 Anthoceros agrestis HOM05D006342 ORTHO05D008155 5.4e-61 239.2 305 46.9
PRCOL_00002739 Prasinoderma coloniale HOM05D006342 ORTHO05D008155 1.6e-60 237.7 303 46.9
SEGI_15165 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 2.1e-52 210.7 175 60.6
Cre04.g219787 Chlamydomonas reinhardtii HOM05D006342 ORTHO05D008155 5.6e-50 202.6 346 39.0
ATR0918G004 Amborella trichopoda HOM05D006342 ORTHO05D008155 3.1e-48 196.8 283 44.9
Aqoxy5G01924 Aquilegia oxysepala HOM05D006342 ORTHO05D008155 6.9e-40 169.1 130 64.6
Glyma.10G123801 Glycine max HOM05D006342 ORTHO05D008155 3.0e-27 127.1 98 63.3
Glyma.16G064700 Glycine max HOM05D006342 ORTHO05D008155 3.0e-27 127.1 98 63.3
ATR0782G112 Amborella trichopoda HOM05D006342 ORTHO05D008155 2.0e-26 124.4 96 62.5
SEGI_15059 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 2.8e-25 120.6 107 59.8
arahy.Tifrunner.gnm1.ann1.6J847D Arachis hypogaea HOM05D006342 ORTHO05D008155 2.0e-23 114.4 98 61.2
arahy.Tifrunner.gnm1.ann1.RT43SE Arachis hypogaea HOM05D006342 ORTHO05D008155 2.0e-23 114.4 98 61.2
arahy.Tifrunner.gnm1.ann1.2FS2S8 Arachis hypogaea HOM05D006342 ORTHO05D008155 1.7e-22 111.3 98 59.2
CARHR052370 Cardamine hirsuta HOM05D006342 ORTHO05D008155 6.5e-22 109.4 90 61.1
CSS0034348 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 7.4e-18 95.9 94 59.6
Eucgr.G00935 Eucalyptus grandis HOM05D006342 ORTHO05D008155 6.1e-12 76.3 113 44.2
arahy.Tifrunner.gnm1.ann1.P2KY5D Arachis hypogaea HOM05D006342 ORTHO05D008155 4.0e-11 73.6 79 50.6
TAR376G0398 Trochodendron aralioides HOM05D000064 ORTHO05D001307 8.8e-11 72.4 45 71.1


User provided reference genes

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