Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G1075 Cannabis sativa HOM05D007126 ORTHO05D008974 7.7e-312 1072.8 564 100.0
Prupe.5G121000 Prunus persica HOM05D007126 ORTHO05D008974 2.2e-241 839.0 568 78.3
MD06G1108400 Malus domestica HOM05D007126 ORTHO05D008974 1.9e-237 825.9 568 76.9
GSVIVG01019542001 Vitis vinifera HOM05D007126 ORTHO05D008974 2.7e-231 805.4 566 75.3
CiPaw.11G120500 Carya illinoinensis HOM05D007126 ORTHO05D008974 2.1e-228 795.8 582 73.5
RcHm_v2.0_Chr7g0194681 Rosa chinensis HOM05D007126 ORTHO05D008974 1.9e-224 782.7 568 73.8
Thecc.03G299000 Theobroma cacao HOM05D007126 ORTHO05D008974 3.2e-224 781.9 581 71.6
QL02p030251 Quercus lobata HOM05D007126 ORTHO05D008974 7.1e-224 780.8 593 71.7
Gorai.008G255000 Gossypium raimondii HOM05D007126 ORTHO05D008974 3.3e-221 771.9 583 70.8
Gohir.A12G236900 Gossypium hirsutum HOM05D007126 ORTHO05D008974 7.4e-221 770.8 583 70.5
Gohir.D12G238100 Gossypium hirsutum HOM05D007126 ORTHO05D008974 9.6e-221 770.4 583 70.7
Duzib205G0473 Durio zibethinus HOM05D007126 ORTHO05D008974 5.3e-219 764.6 574 70.0
CSS0001738 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 2.0e-218 762.7 582 71.0
Actinidia22167 Actinidia chinensis HOM05D007126 ORTHO05D008974 2.6e-218 762.3 585 70.6
Ciclev10019342m.g Citrus clementina HOM05D007126 ORTHO05D008974 3.4e-218 761.9 551 71.7
Atru.chr9.1985 Acer truncatum HOM05D007126 ORTHO05D008974 1.7e-217 759.6 590 69.2
Atru.chr9.1971 Acer truncatum HOM05D007126 ORTHO05D008974 2.2e-217 759.2 589 69.1
Manes.01G047820 Manihot esculenta HOM05D007126 ORTHO05D008974 2.2e-217 759.2 574 70.4
PGR031G2002 Punica granatum HOM05D007126 ORTHO05D008974 9.3e-216 753.8 573 70.2
Potri.001G090800 Populus trichocarpa HOM05D007126 ORTHO05D008974 1.0e-214 750.4 578 70.9
CSS0007498 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 5.1e-214 748.0 576 70.3
Eucgr.D01749 Eucalyptus grandis HOM05D007126 ORTHO05D008974 6.7e-214 747.7 593 68.6
Potri.003G140800 Populus trichocarpa HOM05D007126 ORTHO05D008974 9.7e-213 743.8 516 76.0
Hma1.2p1_0440F.1_g153370 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 4.8e-212 741.5 531 74.6
Nitab4.5_0000726g0050 Nicotiana tabacum HOM05D007126 ORTHO05D008974 1.1e-211 740.3 572 69.6
PGSC0003DMG400004995 Solanum tuberosum HOM05D007126 ORTHO05D008974 2.6e-210 735.7 568 68.8
FvH4_5g04720 Fragaria vesca HOM05D007126 ORTHO05D008974 4.5e-210 734.9 525 74.9
HanXRQChr17g0534861 Helianthus annuus HOM05D007126 ORTHO05D008974 5.0e-209 731.5 576 67.4
VMungo0251G2926 Vigna mungo HOM05D007126 ORTHO05D008974 1.1e-208 730.3 578 68.0
Lj4g0010714 Lotus japonicus HOM05D007126 ORTHO05D008974 9.3e-208 727.2 576 67.9
Medtr8g099525 Medicago truncatula HOM05D007126 ORTHO05D008974 9.3e-208 727.2 570 67.4
TWI15G1063 Tripterygium wilfordii HOM05D007126 ORTHO05D008974 9.3e-208 727.2 560 70.4
Sed0013130 Sechium edule HOM05D007126 ORTHO05D008974 1.6e-207 726.5 581 68.8
CAN.G390.5 Capsicum annuum HOM05D007126 ORTHO05D008974 2.1e-207 726.1 564 69.7
Sopen12g024410 Solanum pennellii HOM05D007126 ORTHO05D008974 4.6e-207 724.9 559 68.9
Glyma.08G023000 Glycine max HOM05D007126 ORTHO05D008974 1.3e-206 723.4 584 66.6
Haze_09075 Corylus avellana HOM05D007126 ORTHO05D008974 8.8e-206 720.7 638 63.8
Solyc12g055940.3 Solanum lycopersicum HOM05D007126 ORTHO05D008974 2.5e-205 719.2 576 66.8
Migut.A00631 Erythranthe guttata HOM05D007126 ORTHO05D008974 7.4e-205 717.6 515 71.8
Aqoxy5G04057_Aqoxy5G04058 Aquilegia oxysepala HOM05D007126 ORTHO05D008974 2.8e-204 715.7 509 71.1
ECA246G3461 Erigeron canadensis HOM05D007126 ORTHO05D008974 3.1e-203 712.2 492 74.4
CsaV3_4G006650 Cucumis sativus L. HOM05D007126 ORTHO05D008974 6.9e-203 711.1 585 67.4
Hund11386 Selenicereus undatus HOM05D007126 ORTHO05D008974 1.5e-202 709.9 592 64.9
BraA09t37117Z Brassica rapa HOM05D007126 ORTHO05D008974 7.2e-200 701.0 517 69.4
A09p14710 Brassica napus HOM05D007126 ORTHO05D008974 9.4e-200 700.7 511 70.3
BolC9t54678H Brassica oleracea HOM05D007126 ORTHO05D008974 1.2e-199 700.3 511 70.5
AL2G10420 Arabidopsis lyrata HOM05D007126 ORTHO05D008974 2.1e-199 699.5 543 66.9
Sc22g0004970 Simmondsia chinensis HOM05D007126 ORTHO05D008974 2.7e-199 699.1 511 70.6
BcaB07g31464 Brassica carinata HOM05D007126 ORTHO05D008974 4.7e-199 698.4 510 70.2
Sp2g00310 Schrenkiella parvula HOM05D007126 ORTHO05D008974 6.1e-199 698.0 498 70.7
CARHR046500 Cardamine hirsuta HOM05D007126 ORTHO05D008974 7.9e-199 697.6 518 68.5
AT1G64430 Arabidopsis thaliana HOM05D007126 ORTHO05D008974 1.8e-198 696.4 543 66.3
PSO063G3961 Papaver somniferum HOM05D007126 ORTHO05D008974 1.8e-198 696.4 560 66.2
BcaC04g22569 Brassica carinata HOM05D007126 ORTHO05D008974 2.3e-198 696.0 511 70.3
AUR62010848 Chenopodium quinoa HOM05D007126 ORTHO05D008974 2.6e-197 692.6 492 72.0
TPR.G3456 Trifolium pratense HOM05D007126 ORTHO05D008974 7.4e-197 691.0 567 65.1
Cc08_g16150 Coffea canephora HOM05D007126 ORTHO05D008974 3.7e-196 688.7 502 72.5
Lalb_Chr09g0332411 Lupinus albus HOM05D007126 ORTHO05D008974 6.3e-196 688.0 585 64.4
AUR62019847 Chenopodium quinoa HOM05D007126 ORTHO05D008974 1.4e-195 686.8 520 68.3
Aa31LG2G1430 Aethionema arabicum HOM05D007126 ORTHO05D008974 1.5e-194 683.3 498 69.5
Thhalv10023389m.g Eutrema salsugineum HOM05D007126 ORTHO05D008974 4.5e-194 681.8 529 66.4
Sabra01G0067000 Salix brachista HOM05D007126 ORTHO05D008974 7.7e-194 681.0 445 79.6
Oeu009966.1 Olea europaea HOM05D007126 ORTHO05D008974 2.9e-193 679.1 547 66.4
ClCG07G011560 Citrullus lanatus HOM05D007126 ORTHO05D008974 1.1e-192 677.2 585 65.0
THA.LOC104817626 Tarenaya hassleriana HOM05D007126 ORTHO05D008974 1.1e-192 677.2 521 66.6
MBI06_g08479_MAGBIO Magnolia biondii HOM05D007126 ORTHO05D008974 1.4e-192 676.8 605 61.2
Rhsim02G0244700 Rhododendron simsii HOM05D007126 ORTHO05D008974 1.2e-191 673.7 580 64.1
Nitab4.5_0004010g0090 Nicotiana tabacum HOM05D007126 ORTHO05D008974 2.1e-191 672.9 570 64.6
arahy.Tifrunner.gnm1.ann1.U3A0V6 Arachis hypogaea HOM05D007126 ORTHO05D008974 2.3e-190 669.5 577 64.3
Nn1g08439 Nelumbo nucifera HOM05D007126 ORTHO05D008974 7.0e-187 657.9 585 61.7
Lj2C166T10 Lonicera japonica HOM05D007126 ORTHO05D008974 5.9e-186 654.8 624 60.4
Lsat_1_v5_gn_3_10920 Lactuca sativa HOM05D007126 ORTHO05D008974 2.5e-184 649.4 574 62.2
C09p17800 Brassica napus HOM05D007126 ORTHO05D008974 4.4e-181 638.6 480 68.3
Hma1.2p1_0440F.1_g153360 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 2.2e-180 636.3 654 57.3
DCAR_029908 Daucus carota HOM05D007126 ORTHO05D008974 2.8e-180 636.0 499 65.9
ATR0598G096 Amborella trichopoda HOM05D007126 ORTHO05D008974 1.2e-178 630.6 594 58.4
arahy.Tifrunner.gnm1.ann1.GEY0M8 Arachis hypogaea HOM05D007126 ORTHO05D008974 2.2e-177 626.3 598 59.5
EL10Ac5g12922 Beta vulgaris HOM05D007126 ORTHO05D008974 2.2e-177 626.3 518 63.5
Peaxi162Scf00117g01130 Petunia axillaris HOM05D007126 ORTHO05D008974 5.4e-171 605.1 530 62.1
MELO3C016299.2 Cucumis melo HOM05D007126 ORTHO05D008974 3.8e-169 599.0 540 63.5
Psat7g210120 Pisum sativum HOM05D007126 ORTHO05D008974 1.6e-167 593.6 469 65.7
HPP92_007857 Vanilla planifolia HOM05D007126 ORTHO05D008974 3.4e-165 585.9 505 59.8
Cpa.g.sc79.28 Carica papaya HOM05D007126 ORTHO05D008974 1.6e-162 577.0 471 65.2
Dinv38826 Davidia involucrata HOM05D007126 ORTHO05D008974 1.1e-160 570.9 528 61.0
SGA_v2.0_scaffold305G47987 Striga asiatica HOM05D007126 ORTHO05D008974 1.6e-159 567.0 529 60.5
SalBow1G1535 Salvia bowleyana HOM05D007126 ORTHO05D008974 2.3e-158 563.1 526 60.1
unitig_37.g12131 Utricularia gibba HOM05D007126 ORTHO05D008974 8.9e-158 561.2 508 59.3
vmacro11349 Vaccinium macrocarpon HOM05D007126 ORTHO05D008974 3.3e-152 542.7 587 54.2
Zm00001eb028190 Zea mays HOM05D007126 ORTHO05D008974 7.5e-141 505.0 499 53.9
Mapoly0029s0043 Marchantia polymorpha HOM05D007126 ORTHO05D008974 2.2e-140 503.4 515 52.0
TAR374G0215 Trochodendron aralioides HOM05D007126 ORTHO05D008974 6.4e-140 501.9 325 78.5
Phvul.002G298304 Phaseolus vulgaris HOM05D007126 ORTHO05D008974 3.9e-137 492.7 325 75.7
Pp3c15_17220 Physcomitrium patens HOM05D007126 ORTHO05D008974 1.2e-133 481.1 517 49.9
CDE08G1056 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 2.4e-126 456.8 370 61.6
SMO367G1126 Selaginella moellendorffii HOM05D007126 ORTHO05D008974 9.0e-126 454.9 499 49.5
CBR_g19104 Chara braunii HOM05D007126 ORTHO05D008974 2.2e-100 370.5 516 43.6
Carub.0002s0034 Capsella rubella HOM05D007126 ORTHO05D008974 2.6e-85 320.5 229 72.9
FAN18G3621 Fragaria x ananassa HOM05D007126 ORTHO05D008974 1.7e-76 291.2 247 66.8
FAN08G3578 Fragaria x ananassa HOM05D007126 ORTHO05D008974 7.4e-72 275.8 271 60.5
Carub.0002s0035 Capsella rubella HOM05D007126 ORTHO05D008974 1.5e-64 251.5 237 56.1
Cre14.g611950 Chlamydomonas reinhardtii HOM05D007126 ORTHO05D008974 5.7e-56 223.0 532 32.0
Dinv37525 Davidia involucrata HOM05D007126 ORTHO05D008974 9.8e-56 222.2 281 50.5
SEGI_23531 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 5.4e-54 216.5 199 52.8
CDE08G0877 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 6.6e-52 209.5 151 74.2
SEGI_08908 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 3.3e-51 207.2 223 52.9
Os08g0332700 Oryza sativa ssp. japonica HOM05D007126 ORTHO05D008974 2.0e-48 198.0 208 53.4
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 2.6e-40 171.0 236 50.8
Cfa021999 Carpinus fangiana HOM05D007126 ORTHO05D008974 2.9e-39 167.5 172 55.2
SEGI_34352 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 2.9e-31 141.0 113 64.6
Cpa.g.sc79.27 Carica papaya HOM05D007126 ORTHO05D008974 1.7e-23 115.2 71 90.1
FAN13G2101 Fragaria x ananassa HOM05D007126 ORTHO05D008974 6.0e-21 106.7 64 89.1
BcaC09g50327 Brassica carinata HOM05D017681 ORTHO05D019883 4.4e-08 63.9 117 34.2
BcaC04g20679 Brassica carinata HOM05D017681 ORTHO05D019883 7.6e-08 63.2 117 34.2


User provided reference genes

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