Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G1060 Cannabis sativa HOM05D009472 ORTHO05D000482 6.3e-285 983.4 489 100.0
CANSAT80G2531 Cannabis sativa HOM05D009472 ORTHO05D000482 2.1e-224 782.3 527 77.2
CANSAT11G0653 Cannabis sativa HOM05D009472 ORTHO05D000137 1.3e-218 763.1 462 86.4
CANSAT80G0604 Cannabis sativa HOM05D009472 ORTHO05D000482 7.9e-187 657.5 375 89.3
CANSAT25G3083 Cannabis sativa HOM05D009472 ORTHO05D000482 1.1e-183 647.1 402 83.6
CANSAT01G1142 Cannabis sativa HOM05D009472 ORTHO05D000482 3.1e-98 363.2 527 40.0
CANSAT56G1481 Cannabis sativa HOM05D009472 ORTHO05D000482 4.3e-92 342.8 523 39.6
CANSAT11G1998 Cannabis sativa HOM05D009472 ORTHO05D000482 9.3e-79 298.5 372 48.1
CANSAT54G2680 Cannabis sativa HOM05D002262 ORTHO05D000482 2.7e-62 243.8 490 33.5
CANSAT35G1168 Cannabis sativa HOM05D002262 ORTHO05D000482 1.0e-56 225.3 421 35.9
CANSAT54G2928 Cannabis sativa HOM05D009472 ORTHO05D000482 1.6e-54 218.0 133 89.5
CANSAT80G1435 Cannabis sativa HOM05D002262 ORTHO05D000482 1.5e-49 201.4 471 33.1
CANSAT64G1718 Cannabis sativa HOM05D017160 ORTHO05D000137 2.3e-45 187.6 328 36.0
CANSAT21G1240 Cannabis sativa HOM05D020893 ORTHO05D000482 1.5e-44 184.9 207 47.8
CANSAT54G1856 Cannabis sativa HOM05D009472 ORTHO05D000137 7.7e-41 172.6 349 38.7
CANSAT56G2811 Cannabis sativa HOM05D002262 ORTHO05D000482 1.6e-38 164.9 334 32.9
CANSAT25G2712 Cannabis sativa HOM05D002262 ORTHO05D000482 4.8e-27 126.7 273 34.1
CANSAT54G1872 Cannabis sativa HOM05D002262 ORTHO05D000482 5.5e-23 113.2 277 30.3
Oeu000023.2 Olea europaea HOM05D002262 ORTHO05D000482 5.5e-23 113.2 305 28.5
CANSAT54G2644 Cannabis sativa HOM05D020893 ORTHO05D000482 2.6e-20 104.4 87 55.2
CANSAT78G1425 Cannabis sativa HOM05D020893 ORTHO05D000482 2.6e-20 104.4 87 55.2
Solyc06g008150.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 7.5e-20 102.8 428 27.1
CANSAT54G0758 Cannabis sativa HOM05D002262 ORTHO05D000482 1.7e-19 101.7 424 25.2
Nitab4.5_0006980g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.7e-19 101.7 338 27.8
PGSC0003DMG400014694 Solanum tuberosum HOM05D005063 ORTHO05D000482 3.7e-19 100.5 464 26.3
PGSC0003DMG400009651 Solanum tuberosum HOM05D002262 ORTHO05D000482 6.3e-19 99.8 356 27.8
Sopen06g002980 Solanum pennellii HOM05D005063 ORTHO05D000482 1.4e-18 98.6 428 26.9
CANSAT80G2652 Cannabis sativa HOM05D023333 ORTHO05D000137 2.4e-18 97.8 415 28.4
Ciclev10017905m.g Citrus clementina HOM05D007816 ORTHO05D000482 1.6e-17 95.1 297 28.3
CANSAT21G1673 Cannabis sativa HOM05D009472 ORTHO05D000137 2.0e-17 94.7 233 34.8
CANSAT64G1675 Cannabis sativa HOM05D002262 ORTHO05D000482 2.0e-17 94.7 217 34.1
Nitab4.5_0002160g0110 Nicotiana tabacum HOM05D000713 ORTHO05D000482 2.7e-17 94.4 346 26.6
CANSAT21G1289 Cannabis sativa HOM05D009472 ORTHO05D000137 3.5e-17 94.0 236 34.3
CANSAT64G1982 Cannabis sativa HOM05D009472 ORTHO05D000137 3.5e-17 94.0 236 34.3
Nitab4.5_0003111g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 7.8e-17 92.8 377 25.7
Nitab4.5_0000326g0300 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.7e-16 91.7 312 27.6
CANSAT25G2067 Cannabis sativa HOM05D002262 ORTHO05D000482 3.8e-16 90.5 287 28.6
CANSAT78G0124 Cannabis sativa HOM05D009472 ORTHO05D000482 1.5e-15 88.6 396 28.3
Nitab4.5_0005705g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 5.6e-15 86.7 318 24.5
Sopen01g038220 Solanum pennellii HOM05D005063 ORTHO05D000482 5.6e-15 86.7 434 24.4
Nitab4.5_0004407g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 9.5e-15 85.9 309 25.6
Nitab4.5_0002279g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.6e-14 85.1 413 22.3
PGSC0003DMG400000031 Solanum tuberosum HOM05D005063 ORTHO05D000482 1.6e-14 85.1 418 24.4
Nitab4.5_0009415g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.8e-14 84.3 239 25.9
Nitab4.5_0001173g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.6e-14 84.0 384 24.5
Nitab4.5_0009593g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 4.7e-14 83.6 239 25.5
SGA_v2.0_scaffold160G37744 Striga asiatica HOM05D002262 ORTHO05D000137 4.7e-14 83.6 383 25.6
CANSAT54G0826 Cannabis sativa HOM05D002262 ORTHO05D000482 1.8e-13 81.6 173 34.7
Nitab4.5_0004808g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.3e-13 81.3 321 24.9
Nitab4.5_0010313g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 3.0e-13 80.9 362 24.0
Solyc01g094420.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 4.0e-13 80.5 483 24.4
Nitab4.5_0007528g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 8.9e-13 79.3 289 28.0
Nitab4.5_0009150g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 8.9e-13 79.3 454 25.8
CANSAT01G0151 Cannabis sativa HOM05D020893 ORTHO05D000482 1.2e-12 79.0 69 55.1
CANSAT01G2439 Cannabis sativa HOM05D002262 ORTHO05D000482 1.2e-12 79.0 166 33.1
CANSAT78G2134 Cannabis sativa HOM05D002262 ORTHO05D000482 1.2e-12 79.0 166 33.1
SGA_v2.0_scaffold219G42531 Striga asiatica HOM05D002262 ORTHO05D000482 5.7e-12 76.6 316 25.6
CANSAT80G0150 Cannabis sativa HOM05D002262 ORTHO05D000482 9.8e-12 75.9 225 29.3
TWI18G0445 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.3e-11 75.5 417 23.0
CANSAT21G1799 Cannabis sativa HOM05D020893 ORTHO05D000482 1.7e-11 75.1 67 53.7
Oeu037738.1 Olea europaea HOM05D002262 ORTHO05D000482 1.7e-11 75.1 273 26.4
Nitab4.5_0002951g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.2e-11 74.7 290 26.2
CANSAT54G0857 Cannabis sativa HOM05D002262 ORTHO05D000482 2.9e-11 74.3 180 29.4
Nitab4.5_0003392g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.9e-11 74.3 259 24.3
CANSAT11G1281 Cannabis sativa HOM05D002262 ORTHO05D000482 3.7e-11 73.9 150 32.7
Nitab4.5_0003619g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.7e-11 73.9 239 24.3
TWI39G0946 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.7e-11 73.9 420 22.4
Nitab4.5_0003525g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 4.9e-11 73.6 192 27.1
TWI63G1251 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.9e-11 73.6 416 22.8
CANSAT78G2407 Cannabis sativa HOM05D008636 ORTHO05D000482 6.4e-11 73.2 161 31.1
Nitab4.5_0014929g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.4e-10 72.0 183 28.4
CANSAT25G1632 Cannabis sativa HOM05D008636 ORTHO05D000482 1.8e-10 71.6 162 30.9
Nitab4.5_0005135g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.8e-10 71.6 254 28.0
PSO063G4195 Papaver somniferum HOM05D007816 ORTHO05D000397 1.8e-10 71.6 230 26.5
PSO421G0071 Papaver somniferum HOM05D007816 ORTHO05D000397 1.8e-10 71.6 230 26.1
CANSAT78G0682 Cannabis sativa HOM05D017160 ORTHO05D000137 2.4e-10 71.2 140 32.1
Nitab4.5_0013206g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.4e-10 71.2 227 24.7
Nitab4.5_0003869g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.2e-10 70.9 238 26.1
Nitab4.5_0004192g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.2e-10 70.9 434 25.3
Nitab4.5_0004770g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.2e-10 70.9 207 24.2
SGA_v2.0_scaffold23G10125 Striga asiatica HOM05D000679 ORTHO05D000137 3.2e-10 70.9 300 26.7
Nitab4.5_0011754g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 4.1e-10 70.5 207 23.7
TWI77G0850 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.1e-10 70.5 276 24.3
Nitab4.5_0001230g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 5.4e-10 70.1 286 24.1
Nitab4.5_0004147g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 5.4e-10 70.1 192 26.6
Nitab4.5_0011458g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 5.4e-10 70.1 207 23.7
Nitab4.5_0001473g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 9.2e-10 69.3 207 23.2
Nitab4.5_0011972g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 9.2e-10 69.3 237 23.2
Nitab4.5_0013791g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.2e-09 68.9 207 23.7
TWI59G0262 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.2e-09 68.9 297 22.9
TWI75G0282 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.2e-09 68.9 297 22.9
CAN.G1344.11 Capsicum annuum HOM05D000679 ORTHO05D000482 1.6e-09 68.6 284 25.0
Oeu010881.1 Olea europaea HOM05D002749 ORTHO05D000708 1.6e-09 68.6 200 27.0
Nitab4.5_0001927g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.0e-09 68.2 270 24.1
Nitab4.5_0003021g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.0e-09 68.2 205 24.9
Nitab4.5_0003911g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.0e-09 68.2 221 25.3
Nitab4.5_0004040g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.0e-09 68.2 226 23.0
Nitab4.5_0007360g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.7e-09 67.8 290 24.8
Nitab4.5_0000832g0160 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.5e-09 67.4 206 23.8
Nitab4.5_0007069g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.5e-09 67.4 306 21.2
Nitab4.5_0000832g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000482 5.9e-09 66.6 231 23.4
Nitab4.5_0000113g0280 Nicotiana tabacum HOM05D002262 ORTHO05D000482 7.8e-09 66.2 239 24.3
Nitab4.5_0013466g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 7.8e-09 66.2 212 21.7
CANSAT01G1167 Cannabis sativa HOM05D008721 ORTHO05D000482 1.0e-08 65.9 292 25.3
Nitab4.5_0013466g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.0e-08 65.9 209 23.0
PSO801G0546 Papaver somniferum HOM05D000537 ORTHO05D000415 1.0e-08 65.9 197 27.4
CANSAT54G1171 Cannabis sativa HOM05D008721 ORTHO05D000482 1.3e-08 65.5 198 26.8
Nitab4.5_0000252g0250 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.3e-08 65.5 281 23.1
Nitab4.5_0001896g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.3e-08 65.5 250 23.6
MELO3C007522.2 Cucumis melo HOM05D007907 ORTHO05D009079 1.7e-08 65.1 296 24.3
Nitab4.5_0000749g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.7e-08 65.1 207 22.7
SGA_v2.0_scaffold276G46661 Striga asiatica HOM05D000679 ORTHO05D000137 1.7e-08 65.1 491 22.6
SGA_v2.0_scaffold59G20643 Striga asiatica HOM05D000679 ORTHO05D000137 1.7e-08 65.1 491 22.6
Nitab4.5_0002352g0090 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.3e-08 64.7 209 23.0
Oeu063770.1 Olea europaea HOM05D002749 ORTHO05D000482 2.3e-08 64.7 178 30.3
Sed0000312 Sechium edule HOM05D007907 ORTHO05D009079 2.3e-08 64.7 356 22.2
Nitab4.5_0000576g0030 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.0e-08 64.3 294 24.1
Nitab4.5_0001863g0140 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.0e-08 64.3 342 22.8
CANSAT35G0566 Cannabis sativa HOM05D008721 ORTHO05D000482 5.0e-08 63.5 209 26.8
CANSAT80G1500 Cannabis sativa HOM05D008721 ORTHO05D000482 5.0e-08 63.5 200 28.0
Nitab4.5_0000227g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 6.6e-08 63.2 270 23.7
Nitab4.5_0007629g0050 Nicotiana tabacum HOM05D005877 ORTHO05D010356 6.6e-08 63.2 223 26.5
TWI14G0228 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 6.6e-08 63.2 287 22.6
CANSAT11G2655 Cannabis sativa HOM05D020893 ORTHO05D000482 8.6e-08 62.8 104 38.5
Nitab4.5_0001732g0040 Nicotiana tabacum HOM05D008646 ORTHO05D010739 8.6e-08 62.8 211 27.0
Nitab4.5_0004238g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 8.6e-08 62.8 218 26.6
Nitab4.5_0009596g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 8.6e-08 62.8 230 24.8
Solyc11g061985.1 Solanum lycopersicum HOM05D002262 ORTHO05D000482 8.6e-08 62.8 281 22.1
CAN.G1169.9 Capsicum annuum HOM05D005063 ORTHO05D000482 1.1e-07 62.4 227 23.3
Nitab4.5_0003261g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000482 1.1e-07 62.4 144 28.5
TWI18G0429 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.1e-07 62.4 275 24.0
TWI77G0416 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 1.1e-07 62.4 260 23.5
Ciclev10003531m.g Citrus clementina HOM05D002262 ORTHO05D000482 1.5e-07 62.0 235 25.5
Oeu025649.1 Olea europaea HOM05D002749 ORTHO05D000482 1.5e-07 62.0 178 28.1
Nitab4.5_0001082g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.9e-07 61.6 224 20.1
CANSAT25G0060 Cannabis sativa HOM05D023333 ORTHO05D000137 2.5e-07 61.2 171 31.0
CANSAT25G1620 Cannabis sativa HOM05D008721 ORTHO05D000482 2.5e-07 61.2 257 26.5
Nitab4.5_0002655g0110 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.5e-07 61.2 303 20.8
Nitab4.5_0002841g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.5e-07 61.2 205 24.4
Nitab4.5_0002951g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.5e-07 61.2 288 24.0
Nitab4.5_0005199g0110 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.5e-07 61.2 178 28.7
CsaV3_1G032310 Cucumis sativus L. HOM05D010240 ORTHO05D000482 3.3e-07 60.8 284 24.6
CsaV3_6G008220 Cucumis sativus L. HOM05D010240 ORTHO05D000482 3.3e-07 60.8 284 24.6
Nitab4.5_0000721g0150 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.3e-07 60.8 335 23.3
Solyc10g150130.1 Solanum lycopersicum HOM05D002262 ORTHO05D000482 3.3e-07 60.8 260 21.9
CsaV3_6G042820 Cucumis sativus L. HOM05D007907 ORTHO05D009079 4.3e-07 60.5 296 24.0
Nitab4.5_0010116g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.3e-07 60.5 213 27.2
Nitab4.5_0013676g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.3e-07 60.5 230 25.7
ATR0441G001 Amborella trichopoda HOM05D008721 ORTHO05D000137 5.6e-07 60.1 184 27.7
Nitab4.5_0002848g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 5.6e-07 60.1 236 22.0
Nitab4.5_0006237g0050 Nicotiana tabacum HOM05D008646 ORTHO05D010739 5.6e-07 60.1 185 26.5
TWI74G0931 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 5.6e-07 60.1 175 26.3
TWI74G1109 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 5.6e-07 60.1 235 23.8
CANSAT01G2915 Cannabis sativa HOM05D008721 ORTHO05D000482 7.3e-07 59.7 138 31.2
Nitab4.5_0000471g0160 Nicotiana tabacum HOM05D005877 ORTHO05D000482 7.3e-07 59.7 300 22.0
PSO170G4386 Papaver somniferum HOM05D007816 ORTHO05D000397 9.5e-07 59.3 216 25.0
Nitab4.5_0008937g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.2e-06 58.9 136 27.2
Oeu027636.1 Olea europaea HOM05D002749 ORTHO05D000708 1.2e-06 58.9 184 28.3
Nitab4.5_0004159g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.6e-06 58.5 132 24.2
Nitab4.5_0000320g0140 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.1e-06 58.2 223 23.8
Nitab4.5_0002000g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.1e-06 58.2 171 25.7
Nitab4.5_0004407g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.8e-06 57.8 99 32.3
Nitab4.5_0009218g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.8e-06 57.8 218 24.8
Nitab4.5_0009286g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.8e-06 57.8 179 22.3
Nitab4.5_0012299g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.8e-06 57.8 173 27.2
Nitab4.5_0000477g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.6e-06 57.4 253 24.1
Nitab4.5_0002908g0130 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.6e-06 57.4 111 26.1
Nitab4.5_0000839g0190 Nicotiana tabacum HOM05D002262 ORTHO05D000482 4.7e-06 57.0 132 24.2
Nitab4.5_0002621g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000482 4.7e-06 57.0 154 24.0
Nitab4.5_0004855g0040 Nicotiana tabacum HOM05D008646 ORTHO05D010739 4.7e-06 57.0 185 25.9
Oeu036698.1 Olea europaea HOM05D002749 ORTHO05D000708 4.7e-06 57.0 146 29.5
Nitab4.5_0001131g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000482 6.2e-06 56.6 132 23.5
Nitab4.5_0003233g0060 Nicotiana tabacum HOM05D008646 ORTHO05D010739 6.2e-06 56.6 109 33.0
Nitab4.5_0006446g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 6.2e-06 56.6 132 23.5
Nitab4.5_0009203g0010 Nicotiana tabacum HOM05D008646 ORTHO05D010739 6.2e-06 56.6 170 26.5
Nitab4.5_0001563g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 8.0e-06 56.2 85 35.3


User provided reference genes

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