Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G0969 Cannabis sativa HOM05D008880 ORTHO05D011235 5.8e-124 447.6 229 100.0
CANSAT80G2087 Cannabis sativa HOM05D008880 ORTHO05D011235 1.0e-75 287.3 240 67.9
CANSAT21G0142 Cannabis sativa HOM05D008880 ORTHO05D011235 3.5e-60 235.7 201 63.7
CANSAT78G0818 Cannabis sativa HOM05D008880 ORTHO05D011235 7.5e-55 218.0 140 80.7
CANSAT11G0103 Cannabis sativa HOM05D008880 ORTHO05D011235 6.6e-51 204.9 201 57.7
CANSAT54G2124 Cannabis sativa HOM05D008880 ORTHO05D011235 4.1e-45 185.7 130 73.8
CANSAT11G0442 Cannabis sativa HOM05D008880 ORTHO05D011235 2.6e-39 166.4 133 68.4
CANSAT25G1266 Cannabis sativa HOM05D008880 ORTHO05D011235 2.7e-28 129.8 137 55.5
CANSAT35G0612 Cannabis sativa HOM05D008880 ORTHO05D011235 2.7e-28 129.8 228 40.4
CANSAT64G2389 Cannabis sativa HOM05D008880 ORTHO05D011235 6.8e-24 115.2 141 47.5
CANSAT64G2559 Cannabis sativa HOM05D008880 ORTHO05D011235 4.9e-22 109.0 128 53.9
CANSAT01G1740 Cannabis sativa HOM05D008880 ORTHO05D011235 4.1e-21 105.9 221 40.7
Sopen07g019940 Solanum pennellii HOM05D008880 ORTHO05D001544 1.9e-18 97.1 277 30.0
CANSAT11G0473 Cannabis sativa HOM05D008880 ORTHO05D011235 2.5e-18 96.7 129 51.2
Sopen04g026340 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-18 95.1 276 29.3
Sopen10g016600 Solanum pennellii HOM05D000002 ORTHO05D001544 7.3e-18 95.1 276 29.3
Sopen01g006740 Solanum pennellii HOM05D000002 ORTHO05D000001 9.6e-18 94.7 276 29.3
Sopen01g021410 Solanum pennellii HOM05D000002 ORTHO05D000001 9.6e-18 94.7 276 29.3
Sopen02g017450 Solanum pennellii HOM05D000002 ORTHO05D000001 9.6e-18 94.7 276 29.3
Sopen04g011600 Solanum pennellii HOM05D000002 ORTHO05D000001 9.6e-18 94.7 276 29.3
Sopen04g018310 Solanum pennellii HOM05D000002 ORTHO05D000001 9.6e-18 94.7 276 29.3
Sopen04g023650 Solanum pennellii HOM05D000002 ORTHO05D000001 9.6e-18 94.7 276 29.3
Sopen05g009710 Solanum pennellii HOM05D000002 ORTHO05D000001 9.6e-18 94.7 276 29.3
Sopen05g021830 Solanum pennellii HOM05D000002 ORTHO05D000001 9.6e-18 94.7 276 29.3
Sopen07g002700 Solanum pennellii HOM05D000002 ORTHO05D000001 9.6e-18 94.7 276 29.3
Sopen09g020870 Solanum pennellii HOM05D000002 ORTHO05D000001 9.6e-18 94.7 276 29.3
Sopen11g015120 Solanum pennellii HOM05D000002 ORTHO05D000001 9.6e-18 94.7 276 29.3
Sopen11g015130 Solanum pennellii HOM05D000002 ORTHO05D000001 9.6e-18 94.7 276 29.3
Sopen12g003850 Solanum pennellii HOM05D000002 ORTHO05D000001 9.6e-18 94.7 276 29.3
Sopen12g003860 Solanum pennellii HOM05D000002 ORTHO05D000001 9.6e-18 94.7 276 29.3
Sopen12g023960 Solanum pennellii HOM05D000002 ORTHO05D000001 9.6e-18 94.7 276 29.3
Sopen12g023970 Solanum pennellii HOM05D000002 ORTHO05D000001 9.6e-18 94.7 276 29.3
Atru.chr1.2215 Acer truncatum HOM05D000002 ORTHO05D000001 1.4e-16 90.9 267 27.3
Sopen10g013010 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-16 90.9 276 29.0
Atru.chr6.681 Acer truncatum HOM05D008880 ORTHO05D011235 3.1e-16 89.7 213 32.9
CANSAT21G1096 Cannabis sativa HOM05D008880 ORTHO05D011235 5.2e-16 89.0 123 45.5
CANSAT80G1402 Cannabis sativa HOM05D008880 ORTHO05D011235 6.8e-16 88.6 127 43.3
Sopen05g028350 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-15 87.8 220 29.1
Sopen11g023840 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-15 86.3 277 28.2
CANSAT25G1515 Cannabis sativa HOM05D008880 ORTHO05D011235 3.8e-14 82.8 49 81.6
CANSAT54G0364 Cannabis sativa HOM05D008880 ORTHO05D011235 8.4e-14 81.6 45 88.9
TWI56G0460 Tripterygium wilfordii HOM05D008880 ORTHO05D001544 2.4e-13 80.1 242 28.9
CANSAT64G2049 Cannabis sativa HOM05D008880 ORTHO05D011235 3.2e-13 79.7 45 86.7
TWI34G1618 Tripterygium wilfordii HOM05D008880 ORTHO05D001544 4.2e-13 79.3 245 28.6
PGR031G3187 Punica granatum HOM05D008880 ORTHO05D001544 9.3e-13 78.2 210 29.5
Sed0006359 Sechium edule HOM05D013798 ORTHO05D011235 1.2e-12 77.8 125 38.4
SGA_v2.0_scaffold43G16507 Striga asiatica HOM05D000002 ORTHO05D000001 4.6e-12 75.9 272 27.6
TWI56G0777 Tripterygium wilfordii HOM05D008880 ORTHO05D001544 6.0e-12 75.5 230 27.8
CANSAT54G0321 Cannabis sativa HOM05D008880 ORTHO05D011235 3.0e-11 73.2 86 45.3
PSO541G2218 Papaver somniferum HOM05D000002 ORTHO05D001544 3.0e-11 73.2 112 37.5
Migut.C00417 Erythranthe guttata HOM05D000002 ORTHO05D001544 3.9e-11 72.8 182 33.0
Sabra16G0242800 Salix brachista HOM05D000002 ORTHO05D001544 6.6e-11 72.0 234 29.5
SHI16484 Sapria himalayana HOM05D008880 ORTHO05D011235 1.5e-10 70.9 77 49.4
SGA_v2.0_scaffold48G17859 Striga asiatica HOM05D000002 ORTHO05D000001 1.5e-10 70.9 260 26.5
CANSAT11G1275 Cannabis sativa HOM05D008880 ORTHO05D011235 4.3e-10 69.3 117 37.6
Sopen08g016350 Solanum pennellii HOM05D000002 ORTHO05D001544 5.6e-10 68.9 174 33.3
TWI53G0611 Tripterygium wilfordii HOM05D000002 ORTHO05D001544 1.3e-09 67.8 213 26.8
Manes.17G029910 Manihot esculenta HOM05D008880 ORTHO05D001544 2.1e-09 67.0 169 28.4
PSO017G3397 Papaver somniferum HOM05D000002 ORTHO05D001544 2.8e-09 66.6 112 34.8
TWI38G0876 Tripterygium wilfordii HOM05D008880 ORTHO05D001544 3.6e-09 66.2 100 36.0
MELO3C031376.2 Cucumis melo HOM05D020348 ORTHO05D025205 4.8e-09 65.9 120 36.7
TWI39G0463 Tripterygium wilfordii HOM05D000002 ORTHO05D001544 6.2e-09 65.5 100 35.0
CANSAT54G0185 Cannabis sativa HOM05D008880 ORTHO05D011235 8.1e-09 65.1 51 66.7
PGR031G0569 Punica granatum HOM05D000002 ORTHO05D001544 1.1e-08 64.7 109 36.7
TAR522G0001 Trochodendron aralioides HOM05D000002 ORTHO05D001544 2.4e-08 63.5 104 37.5
CANSAT21G0663 Cannabis sativa HOM05D008880 ORTHO05D011235 4.0e-08 62.8 122 36.9
CANSAT35G1268 Cannabis sativa HOM05D000004 ORTHO05D000002 4.0e-08 62.8 85 44.7
TWI39G1064 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 4.0e-08 62.8 114 34.2
PGR031G0989 Punica granatum HOM05D000002 ORTHO05D001544 9.0e-08 61.6 122 34.4
CANSAT21G0194 Cannabis sativa HOM05D004810 ORTHO05D006272 2.6e-07 60.1 33 87.9
MD00G1044200 Malus domestica HOM05D000002 ORTHO05D001544 3.4e-07 59.7 182 30.2
Sopen01g011800 Solanum pennellii HOM05D000002 ORTHO05D001544 3.4e-07 59.7 171 29.8
MELO3C033875.2 Cucumis melo HOM05D000260 ORTHO05D014604 9.9e-07 58.2 140 34.3
Hma1.2p1_1846F.1_g305160 Hydrangea macrophylla HOM05D000002 ORTHO05D001544 1.7e-06 57.4 144 32.6
TWI63G0628 Tripterygium wilfordii HOM05D008880 ORTHO05D001544 6.4e-06 55.5 110 30.9
Migut.N03229 Erythranthe guttata HOM05D001093 ORTHO05D000743 8.4e-06 55.1 273 23.8


User provided reference genes

Program Settings