Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G0894 Cannabis sativa HOM05D005798 ORTHO05D007269 3.0e-221 771.5 385 100.0
QL04p025438 Quercus lobata HOM05D005798 ORTHO05D007269 2.0e-161 572.8 388 71.4
CiPaw.13G020800 Carya illinoinensis HOM05D005798 ORTHO05D007269 6.1e-158 561.2 389 70.4
Ciclev10020482m.g Citrus clementina HOM05D005798 ORTHO05D007269 5.3e-154 548.1 389 70.4
Duzib128G1323 Durio zibethinus HOM05D005798 ORTHO05D007269 1.0e-152 543.9 389 68.1
FAN26G0835 Fragaria x ananassa HOM05D005798 ORTHO05D007269 1.1e-151 540.4 391 67.5
Thecc.10G001400 Theobroma cacao HOM05D005798 ORTHO05D007269 1.4e-151 540.0 390 68.5
CSS0042045 Camellia sinensis var. sinensis HOM05D005798 ORTHO05D007269 9.4e-151 537.3 382 67.8
FAN23G2651 Fragaria x ananassa HOM05D005798 ORTHO05D007269 9.4e-151 537.3 390 67.4
FvH4_1g25731 Fragaria vesca HOM05D005798 ORTHO05D007269 7.9e-150 534.3 391 67.0
Prupe.2G112300 Prunus persica HOM05D005798 ORTHO05D007269 3.0e-149 532.3 390 66.7
MD02G1227400 Malus domestica HOM05D005798 ORTHO05D007269 5.1e-149 531.6 390 67.7
Manes.05G060100 Manihot esculenta HOM05D005798 ORTHO05D007269 5.1e-149 531.6 389 67.6
FAN28G0191 Fragaria x ananassa HOM05D005798 ORTHO05D007269 6.7e-149 531.2 391 66.5
MD07G1086000 Malus domestica HOM05D005798 ORTHO05D007269 6.7e-149 531.2 390 66.9
Atru.chr5.52 Acer truncatum HOM05D005798 ORTHO05D007269 5.7e-148 528.1 391 67.0
Phvul.005G016200 Phaseolus vulgaris HOM05D005798 ORTHO05D007269 7.4e-148 527.7 387 66.7
Atru.chr5.24 Acer truncatum HOM05D005798 ORTHO05D007269 1.3e-147 526.9 391 66.8
Sabra16G0226600 Salix brachista HOM05D005798 ORTHO05D007269 8.2e-147 524.2 390 66.4
vmacro21093 Vaccinium macrocarpon HOM05D005798 ORTHO05D007269 8.2e-147 524.2 385 66.2
RcHm_v2.0_Chr1g0343251 Rosa chinensis HOM05D005798 ORTHO05D007269 1.4e-146 523.5 391 66.2
TWI59G0898 Tripterygium wilfordii HOM05D005798 ORTHO05D007269 1.8e-146 523.1 387 65.4
Gohir.A10G242600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 2.4e-146 522.7 387 66.9
Glyma.06G310400 Glycine max HOM05D005798 ORTHO05D007269 9.1e-146 520.8 387 64.3
Glyma.04G128400 Glycine max HOM05D005798 ORTHO05D007269 1.5e-145 520.0 388 64.9
Gorai.011G295600 Gossypium raimondii HOM05D005798 ORTHO05D007269 1.5e-145 520.0 388 67.0
Lj1g0019008 Lotus japonicus HOM05D005798 ORTHO05D007269 2.6e-145 519.2 387 64.3
Gohir.D10G254600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 3.4e-145 518.8 388 66.5
VMungo1080G0989 Vigna mungo HOM05D005798 ORTHO05D007269 4.5e-145 518.5 388 63.9
Potri.001G346900 Populus trichocarpa HOM05D005798 ORTHO05D007269 5.9e-145 518.1 390 66.2
Hund17139 Selenicereus undatus HOM05D005798 ORTHO05D007269 1.0e-144 517.3 387 65.4
MELO3C006251.2 Cucumis melo HOM05D005798 ORTHO05D007269 2.9e-144 515.8 388 64.7
Medtr0103s0100 Medicago truncatula HOM05D005798 ORTHO05D007269 2.9e-144 515.8 389 62.7
ClCG05G002770 Citrullus lanatus HOM05D005798 ORTHO05D007269 2.5e-143 512.7 388 63.9
Cc02_g25760 Coffea canephora HOM05D005798 ORTHO05D007269 3.2e-143 512.3 392 63.0
AUR62027448 Chenopodium quinoa HOM05D005798 ORTHO05D007269 1.2e-142 510.4 386 63.0
CsaV3_3G010280 Cucumis sativus L. HOM05D005798 ORTHO05D007269 1.2e-142 510.4 388 63.9
Lalb_Chr19g0126311 Lupinus albus HOM05D005798 ORTHO05D007269 2.1e-142 509.6 388 63.7
PGR004G0434 Punica granatum HOM05D005798 ORTHO05D007269 1.4e-141 506.9 392 63.3
Peaxi162Scf01124g00121 Petunia axillaris HOM05D005798 ORTHO05D007269 2.3e-141 506.1 390 61.0
PGR004G1878 Punica granatum HOM05D005798 ORTHO05D007269 2.3e-141 506.1 387 63.8
AUR62031252 Chenopodium quinoa HOM05D005798 ORTHO05D007269 6.7e-141 504.6 386 61.9
Psat3g172680 Pisum sativum HOM05D005798 ORTHO05D007269 1.1e-140 503.8 389 62.0
arahy.Tifrunner.gnm1.ann1.1MA0KJ Arachis hypogaea HOM05D005798 ORTHO05D007269 4.4e-140 501.9 392 63.0
Solyc01g088390.3 Solanum lycopersicum HOM05D005798 ORTHO05D007269 4.4e-140 501.9 389 60.4
Sopen01g035220 Solanum pennellii HOM05D005798 ORTHO05D007269 7.4e-140 501.1 389 61.2
PGSC0003DMG400001703 Solanum tuberosum HOM05D005798 ORTHO05D007269 7.4e-140 501.1 389 61.7
Nitab4.5_0009219g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 9.7e-140 500.7 389 62.0
Nitab4.5_0013532g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 9.7e-140 500.7 389 61.4
Nn2g10726 Nelumbo nucifera HOM05D005798 ORTHO05D007269 2.2e-139 499.6 390 63.6
arahy.Tifrunner.gnm1.ann1.6FN2NF Arachis hypogaea HOM05D005798 ORTHO05D007269 3.7e-139 498.8 392 62.8
THA.LOC104817171 Tarenaya hassleriana HOM05D005798 ORTHO05D007269 3.7e-139 498.8 388 63.9
CAN.G1480.2 Capsicum annuum HOM05D005798 ORTHO05D007269 1.1e-138 497.3 387 61.0
EL10Ac8g19272 Beta vulgaris HOM05D005798 ORTHO05D007269 3.1e-138 495.7 385 62.3
Sc26g0001830 Simmondsia chinensis HOM05D005798 ORTHO05D007269 4.1e-138 495.4 384 62.8
Sed0012756 Sechium edule HOM05D005798 ORTHO05D007269 5.3e-138 495.0 388 61.9
Ca_03850_v3 Cicer arietinum L. HOM05D005798 ORTHO05D007269 2.6e-137 492.7 388 61.9
MSTRG.20650 Avicennia marina HOM05D005798 ORTHO05D007269 8.5e-136 487.6 390 60.5
Aa31LG1G26140 Aethionema arabicum HOM05D005798 ORTHO05D007269 9.4e-135 484.2 386 61.9
Oeu024375.1 Olea europaea HOM05D005798 ORTHO05D007269 3.6e-134 482.3 377 62.1
Oeu024376.1 Olea europaea HOM05D005798 ORTHO05D007269 3.6e-134 482.3 377 62.1
AL4G43620 Arabidopsis lyrata HOM05D005798 ORTHO05D007269 8.0e-134 481.1 390 60.0
HanXRQChr16g0519531 Helianthus annuus HOM05D005798 ORTHO05D007269 2.3e-133 479.6 384 63.0
Eucgr.D01150 Eucalyptus grandis HOM05D005798 ORTHO05D007269 2.6e-132 476.1 387 60.5
Migut.B01472 Erythranthe guttata HOM05D005798 ORTHO05D007269 7.0e-130 468.0 388 60.8
Sp4g26670 Schrenkiella parvula HOM05D005798 ORTHO05D007269 9.1e-130 467.6 387 59.9
ECA234G4178 Erigeron canadensis HOM05D005798 ORTHO05D007269 2.0e-129 466.5 376 60.6
AT2G44580 Arabidopsis thaliana HOM05D005798 ORTHO05D007269 7.7e-129 464.5 390 58.2
PSO017G1219 Papaver somniferum HOM05D005798 ORTHO05D007269 3.8e-128 462.2 391 60.1
MBI05_g22048_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 8.5e-128 461.1 384 58.9
PSO782G4885 Papaver somniferum HOM05D005798 ORTHO05D007269 1.1e-127 460.7 391 59.8
BraA05t19450Z Brassica rapa HOM05D005798 ORTHO05D007269 1.5e-127 460.3 385 60.5
BcaC02g12292 Brassica carinata HOM05D005798 ORTHO05D007269 1.9e-127 459.9 385 60.3
C04p05550 Brassica napus HOM05D005798 ORTHO05D007269 1.9e-127 459.9 385 60.3
BcaB02g08835 Brassica carinata HOM05D005798 ORTHO05D007269 4.2e-127 458.8 387 59.4
A05p04740 Brassica napus HOM05D005798 ORTHO05D007269 7.2e-127 458.0 385 60.0
Carub.0004s2713 Capsella rubella HOM05D005798 ORTHO05D007269 1.2e-126 457.2 392 59.7
BolC4t22185H Brassica oleracea HOM05D005798 ORTHO05D007269 1.6e-126 456.8 384 59.9
Lj7C553T5 Lonicera japonica HOM05D005798 ORTHO05D007269 6.1e-126 454.9 388 60.8
unitig_52.g17377 Utricularia gibba HOM05D005798 ORTHO05D007269 1.8e-125 453.4 389 57.3
CARHR139800 Cardamine hirsuta HOM05D005798 ORTHO05D007269 6.8e-125 451.4 379 59.6
PSO063G7295 Papaver somniferum HOM05D005798 ORTHO05D007269 9.8e-124 447.6 401 57.6
TPR.G30814 Trifolium pratense HOM05D005798 ORTHO05D007269 8.3e-123 444.5 344 62.2
Ah.14g086050 Amaranthus hybridus HOM05D005798 ORTHO05D007269 5.0e-120 435.3 383 57.2
Thhalv10001723m.g Eutrema salsugineum HOM05D005798 ORTHO05D007269 2.8e-118 429.5 364 59.6
Zm00001eb112030 Zea mays HOM05D005798 ORTHO05D007269 3.4e-116 422.5 388 55.4
SEGI_02869 Sequoiadendron giganteum HOM05D005798 ORTHO05D007269 4.1e-114 415.6 396 52.3
HPP92_011679 Vanilla planifolia HOM05D005798 ORTHO05D007269 2.0e-113 413.3 390 54.4
Os05g0119600 Oryza sativa ssp. japonica HOM05D005798 ORTHO05D007269 5.0e-112 408.7 378 52.9
COL.COLO4_19318 Corchorus olitorius HOM05D005798 ORTHO05D007269 1.5e-111 407.1 314 65.0
Actinidia33294 Actinidia chinensis HOM05D005798 ORTHO05D007269 2.8e-110 402.9 352 58.5
CDE06G2636 Ceratophyllum demersum HOM05D005798 ORTHO05D007269 2.9e-107 392.9 360 55.0
SGA_v2.0_scaffold17G08178 Striga asiatica HOM05D005798 ORTHO05D007269 1.6e-105 387.1 346 55.8
Nn1g00612 Nelumbo nucifera HOM05D005798 ORTHO05D007269 3.3e-103 379.4 276 65.6
ATR0585G014 Amborella trichopoda HOM05D005798 ORTHO05D007269 9.8e-100 367.9 388 50.8
Pp3c5_22720 Physcomitrium patens HOM05D005798 ORTHO05D007269 5.0e-96 355.5 389 45.0
Cpa.g.sc3387.1 Carica papaya HOM05D005798 ORTHO05D007269 2.2e-91 340.1 243 65.8
Rhsim01G0145000 Rhododendron simsii HOM05D005798 ORTHO05D007269 8.3e-91 338.2 375 47.7
Dinv43575 Davidia involucrata HOM05D005798 ORTHO05D007269 2.3e-88 330.1 264 64.0
AagrBONN_evm.TU.Sc2ySwM_344.2100 Anthoceros agrestis HOM05D005798 ORTHO05D007269 1.2e-86 324.3 376 44.7
TAR375G0847 Trochodendron aralioides HOM05D005798 ORTHO05D007269 1.5e-84 317.4 251 62.9
Mapoly0001s0452 Marchantia polymorpha HOM05D005798 ORTHO05D007269 1.6e-81 307.4 405 40.5
GSVIVG01018417001 Vitis vinifera HOM05D005798 ORTHO05D007269 2.0e-76 290.4 191 71.7
Lsat_1_v5_gn_4_46040 Lactuca sativa HOM05D005798 ORTHO05D007269 9.0e-69 265.0 189 66.7
Actinidia21608 Actinidia chinensis HOM05D005798 ORTHO05D007269 4.6e-65 252.7 157 70.7
Nn3g19112 Nelumbo nucifera HOM05D005798 ORTHO05D007269 5.3e-61 239.2 245 49.4
Haze_02923 Corylus avellana HOM05D005798 ORTHO05D007269 1.4e-58 231.1 187 64.2
Nn1g07358 Nelumbo nucifera HOM05D005798 ORTHO05D007269 4.2e-58 229.6 191 63.4
Prupe.2G112400 Prunus persica HOM05D005798 ORTHO05D007269 1.1e-50 204.9 194 54.1
Nn3g19416 Nelumbo nucifera HOM05D005798 ORTHO05D007269 7.1e-50 202.2 160 60.6
Peaxi162Scf00417g00029 Petunia axillaris HOM05D005798 ORTHO05D007269 4.6e-49 199.5 228 44.3
GSVIVG01018418001 Vitis vinifera HOM05D005798 ORTHO05D007269 1.8e-45 187.6 140 65.7
Prupe.2G112500 Prunus persica HOM05D005798 ORTHO05D007269 2.4e-45 187.2 141 68.1
Dinv43574 Davidia involucrata HOM05D005798 ORTHO05D007269 3.2e-42 176.8 109 75.2
Nn1g07357 Nelumbo nucifera HOM05D005798 ORTHO05D007269 9.3e-42 175.3 135 58.5
CBR_g39622 Chara braunii HOM05D000017 ORTHO05D000013 2.5e-39 167.2 430 29.1
CAN.G74.39 Capsicum annuum HOM05D005798 ORTHO05D007269 2.2e-38 164.1 138 63.0
HanXRQChr12g0366931 Helianthus annuus HOM05D005798 ORTHO05D007269 1.8e-37 161.0 204 43.1
Atru.chr5.133 Acer truncatum HOM05D005798 ORTHO05D007269 2.4e-37 160.6 140 59.3
Cre16.g684155 Chlamydomonas reinhardtii HOM05D005798 ORTHO05D007269 4.1e-37 159.8 414 27.5
PRCOL_00005399 Prasinoderma coloniale HOM05D005798 ORTHO05D007269 7.7e-36 155.6 377 30.0
Atru.chr5.134 Acer truncatum HOM05D005798 ORTHO05D007269 1.7e-35 154.5 93 76.3
CAN.G195.32 Capsicum annuum HOM05D005798 ORTHO05D007269 1.9e-34 151.0 169 43.8
Nn3g19415 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.4e-29 134.8 93 69.9
CAN.G74.38 Capsicum annuum HOM05D005798 ORTHO05D007269 1.3e-27 128.3 93 67.7
HPP92_011700 Vanilla planifolia HOM05D005798 ORTHO05D007269 3.1e-21 107.1 218 32.1
MCO12G177 Micromonas commoda HOM05D005798 ORTHO05D007269 4.1e-21 106.7 479 25.5
HanXRQChr07g0198081 Helianthus annuus HOM05D005798 ORTHO05D007269 1.2e-20 105.1 223 33.6
EL10Ac6g13432 Beta vulgaris HOM05D005798 ORTHO05D007269 1.5e-18 98.2 97 48.5
MBI14_g08084_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 5.0e-11 73.2 83 43.4
TAR375G0441 Trochodendron aralioides HOM05D005798 ORTHO05D007269 1.5e-10 71.6 54 63.0
CAN.G195.33 Capsicum annuum HOM05D005798 ORTHO05D007269 2.1e-09 67.8 72 51.4
HanXRQChr11g0349311 Helianthus annuus HOM05D000428 ORTHO05D011602 1.0e-08 65.5 93 48.4


User provided reference genes

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