Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 4.6e-146 521.2 255 100.0
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 4.5e-77 292.0 252 63.5
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 1.3e-76 290.4 260 62.3
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 4.2e-75 285.4 230 64.8
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 5.5e-75 285.0 197 68.5
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 6.1e-74 281.6 234 63.2
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 6.1e-74 281.6 249 61.8
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 6.1e-74 281.6 249 61.8
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 1.0e-73 280.8 257 63.4
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 1.8e-73 280.0 249 61.8
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 2.6e-72 276.2 233 60.9
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 3.4e-72 275.8 249 60.2
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 4.4e-72 275.4 245 59.6
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 1.7e-71 273.5 200 67.5
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 2.8e-71 272.7 240 58.8
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 3.7e-71 272.3 243 58.4
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 4.9e-71 271.9 199 67.3
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 6.3e-71 271.6 195 67.2
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 1.4e-70 270.4 242 60.3
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 5.4e-70 268.5 212 63.7
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 5.4e-70 268.5 225 60.0
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 7.0e-70 268.1 198 66.2
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 4.5e-69 265.4 238 58.4
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 5.9e-69 265.0 207 64.7
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 5.9e-69 265.0 262 55.7
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 1.0e-68 264.2 201 65.7
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 2.3e-68 263.1 245 56.3
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 2.3e-68 263.1 252 56.3
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 8.6e-68 261.2 254 56.7
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 7.3e-67 258.1 251 54.2
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 1.6e-66 256.9 245 54.7
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 2.1e-66 256.5 208 63.0
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 2.8e-66 256.1 198 64.1
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 3.6e-66 255.8 184 67.9
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 6.1e-66 255.0 200 64.0
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 6.8e-65 251.5 254 53.5
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 1.2e-64 250.8 184 65.8
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 1.5e-64 250.4 230 55.2
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 1.5e-64 250.4 237 54.4
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 1.5e-64 250.4 255 54.1
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 2.0e-64 250.0 199 61.8
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 2.0e-64 250.0 259 54.8
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 2.0e-64 250.0 191 63.4
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 2.6e-64 249.6 181 65.2
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 3.4e-64 249.2 229 58.5
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 4.4e-64 248.8 194 60.8
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 4.4e-64 248.8 246 55.3
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 7.5e-64 248.1 184 64.7
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 7.5e-64 248.1 249 54.6
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 9.8e-64 247.7 174 68.4
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 2.2e-63 246.5 202 62.9
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 2.9e-63 246.1 208 61.1
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 3.7e-63 245.7 194 60.8
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 3.7e-63 245.7 222 58.1
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 4.9e-63 245.4 244 55.3
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 4.9e-63 245.4 196 64.3
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 6.4e-63 245.0 224 55.8
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 8.3e-63 244.6 241 56.0
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 1.1e-62 244.2 234 56.0
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 1.1e-62 244.2 174 69.0
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 1.4e-62 243.8 258 54.3
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 2.4e-62 243.0 183 62.8
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 3.2e-62 242.7 239 54.4
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 3.2e-62 242.7 209 63.6
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 4.1e-62 242.3 235 54.9
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 7.0e-62 241.5 254 55.1
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 1.2e-61 240.7 223 54.3
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 1.2e-61 240.7 171 64.3
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 4.6e-61 238.8 197 58.4
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 6.0e-61 238.4 261 50.6
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 1.3e-60 237.3 262 51.1
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 3.0e-60 236.1 204 58.8
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 6.6e-60 235.0 255 50.6
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 8.6e-60 234.6 194 58.8
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 2.5e-59 233.0 255 50.6
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 1.3e-55 220.7 173 61.3
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 1.1e-54 217.6 229 52.4
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 1.6e-53 213.8 260 48.1
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 1.7e-52 210.3 195 54.9
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 5.2e-49 198.7 206 49.0
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 1.5e-48 197.2 175 51.4
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 1.5e-48 197.2 190 55.3
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 2.0e-48 196.8 187 52.4
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 3.4e-48 196.1 210 49.0
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 2.9e-47 193.0 171 60.8
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 5.4e-46 188.7 361 35.7
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 4.4e-40 169.1 129 69.8
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 6.4e-39 165.2 148 50.7
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 4.0e-33 146.0 137 56.2
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 7.1e-30 135.2 115 58.3
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 1.6e-29 134.0 167 44.3
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 1.1e-27 127.9 115 56.5
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 8.4e-23 111.7 119 53.8
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 5.6e-19 99.0 131 45.8
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 1.1e-17 94.7 123 43.9
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 1.2e-16 91.3 57 68.4
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 1.4e-14 84.3 81 59.3
Cfa011867 Carpinus fangiana HOM05D007528 ORTHO05D008503 4.2e-14 82.8 61 65.6
Hma1.2p1_1327F.1_g275910 Hydrangea macrophylla HOM05D007528 ORTHO05D008503 7.1e-14 82.0 63 66.7
Pp3s30_790 Physcomitrium patens HOM05D002374 ORTHO05D003594 7.2e-06 55.5 65 43.1


User provided reference genes

Program Settings