Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G0847 Cannabis sativa HOM05D003990 ORTHO05D004925 5.2e-204 714.1 361 100.0
Sabra03G0105900 Salix brachista HOM05D003990 ORTHO05D004925 7.0e-132 474.6 366 68.9
Potri.003G145700 Populus trichocarpa HOM05D003990 ORTHO05D004925 5.5e-129 464.9 368 67.4
Manes.11G125600 Manihot esculenta HOM05D003990 ORTHO05D004925 8.0e-128 461.1 370 64.9
RcHm_v2.0_Chr7g0186781 Rosa chinensis HOM05D003990 ORTHO05D004925 5.2e-127 458.4 365 67.1
FAN13G1570 Fragaria x ananassa HOM05D003990 ORTHO05D004925 4.4e-126 455.3 344 69.5
Cfa011935 Carpinus fangiana HOM05D003990 ORTHO05D004925 5.4e-124 448.4 296 74.7
TAR629G1984 Trochodendron aralioides HOM05D003990 ORTHO05D004925 2.0e-123 446.4 349 67.6
HanXRQChr06g0166861 Helianthus annuus HOM05D003990 ORTHO05D004925 2.5e-121 439.5 351 66.4
Solyc08g008530.1 Solanum lycopersicum HOM05D003990 ORTHO05D004925 5.6e-121 438.3 352 65.6
Ciclev10020878m.g Citrus clementina HOM05D003990 ORTHO05D004925 7.3e-121 438.0 338 67.8
TWI60G1311 Tripterygium wilfordii HOM05D003990 ORTHO05D004925 1.2e-120 437.2 342 68.1
DCAR_009092 Daucus carota HOM05D003990 ORTHO05D004925 1.6e-120 436.8 310 71.6
Thhalv10029450m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 2.8e-120 436.0 359 66.6
Sopen08g004380 Solanum pennellii HOM05D003990 ORTHO05D004925 4.7e-120 435.3 352 65.1
PGSC0003DMG400005851 Solanum tuberosum HOM05D003990 ORTHO05D004925 6.1e-120 434.9 355 64.8
Atru.chr9.1910 Acer truncatum HOM05D003990 ORTHO05D004925 1.0e-119 434.1 331 68.6
MD06G1117400 Malus domestica HOM05D003990 ORTHO05D004925 1.0e-119 434.1 366 63.9
Prupe.5G128500 Prunus persica HOM05D003990 ORTHO05D004925 1.4e-119 433.7 287 74.9
Sc01g0010590 Simmondsia chinensis HOM05D003990 ORTHO05D004925 1.4e-119 433.7 356 64.6
Lsat_1_v5_gn_3_13681 Lactuca sativa HOM05D003990 ORTHO05D004925 3.0e-119 432.6 336 67.0
CARHR255860 Cardamine hirsuta HOM05D003990 ORTHO05D004925 4.0e-119 432.2 332 69.0
CiPaw.12G078400 Carya illinoinensis HOM05D003990 ORTHO05D004925 5.2e-119 431.8 364 61.3
Dinv38683 Davidia involucrata HOM05D003990 ORTHO05D001284 5.2e-119 431.8 301 71.4
Gohir.D03G086700 Gossypium hirsutum HOM05D003990 ORTHO05D004925 5.2e-119 431.8 332 68.4
CAN.G792.28 Capsicum annuum HOM05D003990 ORTHO05D004925 6.8e-119 431.4 328 67.4
Hma1.2p1_0212F.1_g090230 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 6.8e-119 431.4 350 65.4
Duzib205G1059 Durio zibethinus HOM05D003990 ORTHO05D004925 8.9e-119 431.0 361 65.4
ECA246G0738 Erigeron canadensis HOM05D003273 ORTHO05D004023 1.2e-118 430.6 305 71.1
Gorai.003G075400 Gossypium raimondii HOM05D003990 ORTHO05D004925 1.2e-118 430.6 332 68.4
Sp6g06750 Schrenkiella parvula HOM05D003990 ORTHO05D004925 2.0e-118 429.9 345 66.1
Aqoxy7G00029 Aquilegia oxysepala HOM05D003990 ORTHO05D004925 7.5e-118 427.9 356 65.2
AT4G10750 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 9.8e-118 427.6 360 63.1
Carub.0006s2953 Capsella rubella HOM05D003990 ORTHO05D004925 9.8e-118 427.6 366 62.8
Cpa.g.sc175.15 Carica papaya HOM05D003990 ORTHO05D004925 1.3e-117 427.2 360 63.6
QL02p029212 Quercus lobata HOM05D003990 ORTHO05D004925 1.3e-117 427.2 287 73.2
BcaB01g01511 Brassica carinata HOM05D003990 ORTHO05D004925 1.7e-117 426.8 352 64.8
BraA09t38413Z Brassica rapa HOM05D003990 ORTHO05D004925 2.2e-117 426.4 331 67.1
Gohir.A02G097800 Gossypium hirsutum HOM05D003990 ORTHO05D004925 2.9e-117 426.0 332 66.9
COL.COLO4_10785 Corchorus olitorius HOM05D003990 ORTHO05D004925 6.4e-117 424.9 360 65.0
Oeu022039.1 Olea europaea HOM05D003990 ORTHO05D004925 8.3e-117 424.5 366 62.0
PSO135G0880 Papaver somniferum HOM05D003990 ORTHO05D004925 8.3e-117 424.5 341 65.1
AL6G44800 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 1.8e-116 423.3 360 62.8
BcaC04g21069 Brassica carinata HOM05D003990 ORTHO05D004925 1.8e-116 423.3 352 64.8
A09p28480 Brassica napus HOM05D003990 ORTHO05D004925 1.8e-116 423.3 331 66.5
C09p36050 Brassica napus HOM05D003990 ORTHO05D004925 1.8e-116 423.3 352 64.8
BolC9t56444H Brassica oleracea HOM05D003990 ORTHO05D004925 1.8e-116 423.3 352 64.8
CSS0021441 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 4.1e-116 422.2 297 71.7
CSS0010282 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 7.0e-116 421.4 299 71.2
Haze_14077 Corylus avellana HOM05D003990 ORTHO05D004925 7.0e-116 421.4 341 64.5
Peaxi162Scf00102g01878 Petunia axillaris HOM05D003990 ORTHO05D000951 7.0e-116 421.4 362 61.6
Nitab4.5_0000673g0130 Nicotiana tabacum HOM05D003990 ORTHO05D004925 9.2e-116 421.0 334 66.2
MBI12_g30966_MAGBIO Magnolia biondii HOM05D003990 ORTHO05D004925 2.0e-115 419.9 353 62.9
PSO384G4439 Papaver somniferum HOM05D003990 ORTHO05D004925 1.3e-114 417.2 370 61.6
Thecc.03G222400 Theobroma cacao HOM05D003990 ORTHO05D004925 1.7e-114 416.8 359 63.5
THA.LOC104813054 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 3.9e-114 415.6 329 64.4
Lalb_Chr17g0338551 Lupinus albus HOM05D003990 ORTHO05D004925 6.6e-114 414.8 291 71.8
Cc08_g16660 Coffea canephora HOM05D003990 ORTHO05D004925 1.5e-113 413.7 355 61.7
Eucgr.D01688 Eucalyptus grandis HOM05D003990 ORTHO05D004925 7.3e-113 411.4 374 59.1
Nitab4.5_0001962g0040 Nicotiana tabacum HOM05D003990 ORTHO05D004925 7.3e-113 411.4 323 66.6
Lj8A201T86 Lonicera japonica HOM05D003990 ORTHO05D004925 8.0e-112 407.9 270 74.1
Aa31LG9G11320 Aethionema arabicum HOM05D003990 ORTHO05D004925 1.0e-111 407.5 364 60.7
CsaV3_3G000920 Cucumis sativus L. HOM05D003990 ORTHO05D004925 3.1e-111 406.0 313 66.1
Rhsim02G0251300 Rhododendron simsii HOM05D003990 ORTHO05D004925 3.1e-111 406.0 360 63.1
MELO3C013779.2 Cucumis melo HOM05D003990 ORTHO05D004925 8.9e-111 404.4 291 69.1
Lj2g0026928 Lotus japonicus HOM05D003990 ORTHO05D004925 8.9e-111 404.4 332 64.8
Sed0016376 Sechium edule HOM05D003990 ORTHO05D004925 5.8e-110 401.7 366 59.3
Ah.12g053140 Amaranthus hybridus HOM05D003990 ORTHO05D004925 1.3e-109 400.6 344 63.4
FvH4_5g11021 Fragaria vesca HOM05D003990 ORTHO05D004925 2.2e-109 399.8 289 69.9
TPR.G36963 Trifolium pratense HOM05D003990 ORTHO05D004925 3.2e-108 396.0 291 69.4
MSTRG.13719 Avicennia marina HOM05D003990 ORTHO05D004925 2.7e-107 392.9 295 65.4
Nn1g00366 Nelumbo nucifera HOM05D003990 ORTHO05D004925 2.7e-107 392.9 354 57.9
CDE04G2232 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 6.0e-107 391.7 325 61.5
Medtr1g031790 Medicago truncatula HOM05D003990 ORTHO05D004925 3.9e-106 389.0 362 59.4
VMungo1215G2928 Vigna mungo HOM05D003990 ORTHO05D004925 2.8e-104 382.9 289 67.1
HPP92_008886 Vanilla planifolia HOM05D003990 ORTHO05D004925 8.1e-104 381.3 370 56.5
Phvul.003G021600 Phaseolus vulgaris HOM05D003990 ORTHO05D004925 1.3e-101 374.0 334 60.2
Cfa011937 Carpinus fangiana HOM05D003990 ORTHO05D004925 2.9e-101 372.9 321 60.7
Os09g0529900 Oryza sativa ssp. japonica HOM05D003990 ORTHO05D004925 7.8e-99 364.8 343 56.0
CiPaw.11G113600 Carya illinoinensis HOM05D003990 ORTHO05D004925 5.1e-98 362.1 266 67.7
Zm00001eb103220 Zea mays HOM05D003990 ORTHO05D004925 5.6e-97 358.6 308 58.8
ATR0620G013 Amborella trichopoda HOM05D003990 ORTHO05D004925 2.3e-95 353.2 354 55.1
Duzib084G0313 Durio zibethinus HOM05D003990 ORTHO05D004925 3.1e-95 352.8 262 63.0
AUR62019907 Chenopodium quinoa HOM05D003990 ORTHO05D004925 3.4e-94 349.4 252 69.8
QL02p029171 Quercus lobata HOM05D003990 ORTHO05D004925 2.9e-93 346.3 268 63.8
AUR62007043 Chenopodium quinoa HOM05D003990 ORTHO05D004925 8.4e-93 344.7 252 67.9
COL.COLO4_10784 Corchorus olitorius HOM05D003990 ORTHO05D004925 1.9e-92 343.6 262 63.7
Oeu022040.1 Olea europaea HOM05D003990 ORTHO05D004925 1.9e-92 343.6 267 62.9
EL10Ac5g12450 Beta vulgaris HOM05D003990 ORTHO05D004925 5.4e-92 342.0 255 66.7
Ca_12579_v3 Cicer arietinum L. HOM05D003990 ORTHO05D004925 1.5e-89 334.0 249 68.3
QL02p029158 Quercus lobata HOM05D003990 ORTHO05D004925 1.6e-88 330.5 269 62.5
vmacro11510 Vaccinium macrocarpon HOM05D003990 ORTHO05D004925 8.1e-88 328.2 357 54.9
Psat6g044760 Pisum sativum HOM05D003990 ORTHO05D004925 4.0e-87 325.9 250 66.8
SEGI_30656 Sequoiadendron giganteum HOM05D003990 ORTHO05D004925 6.9e-87 325.1 318 56.0
EL10Ac5g12452 Beta vulgaris HOM05D003990 ORTHO05D004925 2.2e-85 320.1 264 60.2
AUR62019906 Chenopodium quinoa HOM05D003990 ORTHO05D004925 3.8e-85 319.3 270 58.9
Ah.12g053130 Amaranthus hybridus HOM05D003990 ORTHO05D004925 6.4e-85 318.5 264 59.8
AUR62007042 Chenopodium quinoa HOM05D003990 ORTHO05D004925 6.4e-85 318.5 264 59.8
Sc01g0010580 Simmondsia chinensis HOM05D003990 ORTHO05D004925 1.7e-82 310.5 261 60.2
BraA01t01479Z Brassica rapa HOM05D003990 ORTHO05D004925 3.3e-81 306.2 270 55.9
A01p15340 Brassica napus HOM05D003990 ORTHO05D004925 5.6e-81 305.4 272 55.1
Thhalv10026820m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 9.6e-81 304.7 271 55.7
THA.LOC104815209 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 9.6e-81 304.7 264 54.9
Aa31LG6G7280 Aethionema arabicum HOM05D003990 ORTHO05D004925 1.6e-80 303.9 276 54.3
A01p15350 Brassica napus HOM05D003990 ORTHO05D004925 6.2e-80 302.0 270 55.9
COL.COLO4_10783 Corchorus olitorius HOM05D003990 ORTHO05D004925 8.1e-80 301.6 245 63.3
BolC1t01855H Brassica oleracea HOM05D003990 ORTHO05D004925 1.1e-79 301.2 272 54.4
Migut.O00797 Erythranthe guttata HOM05D003990 ORTHO05D004925 1.1e-79 301.2 239 65.7
BcaNung01112 Brassica carinata HOM05D003990 ORTHO05D004925 1.8e-79 300.4 272 55.1
BolC1t01856H Brassica oleracea HOM05D003990 ORTHO05D004925 3.1e-79 299.7 335 49.3
arahy.Tifrunner.gnm1.ann1.LQZ0GD Arachis hypogaea HOM05D003990 ORTHO05D004925 1.2e-78 297.7 270 53.7
arahy.Tifrunner.gnm1.ann1.ZCAA4H Arachis hypogaea HOM05D003990 ORTHO05D004925 1.2e-78 297.7 270 53.7
BcaC09g50914 Brassica carinata HOM05D003990 ORTHO05D004925 2.0e-78 297.0 271 54.2
C01p19300 Brassica napus HOM05D003990 ORTHO05D004925 4.5e-78 295.8 277 53.4
C01p19290 Brassica napus HOM05D003990 ORTHO05D004925 9.9e-78 294.7 272 53.7
AL7G29210 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 2.2e-77 293.5 264 54.5
Carub.0007s1702 Capsella rubella HOM05D003990 ORTHO05D004925 2.2e-77 293.5 267 54.7
arahy.Tifrunner.gnm1.ann1.IT3SMZ Arachis hypogaea HOM05D003990 ORTHO05D004925 6.0e-75 285.4 282 48.9
arahy.Tifrunner.gnm1.ann1.Y0R09G Arachis hypogaea HOM05D003990 ORTHO05D004925 7.9e-75 285.0 283 48.8
arahy.Tifrunner.gnm1.ann1.3SR05H Arachis hypogaea HOM05D003990 ORTHO05D004925 1.8e-74 283.9 270 51.5
arahy.Tifrunner.gnm1.ann1.UPJ447 Arachis hypogaea HOM05D003990 ORTHO05D004925 1.8e-74 283.9 270 51.5
BraA01t01478Z Brassica rapa HOM05D003990 ORTHO05D004925 7.4e-73 278.5 272 52.9
CARHR006280 Cardamine hirsuta HOM05D003990 ORTHO05D004925 3.6e-72 276.2 238 57.1
AagrBONN_evm.TU.Sc2ySwM_117.985 Anthoceros agrestis HOM05D003990 ORTHO05D004925 1.8e-71 273.9 272 51.8
BcaC09g50915 Brassica carinata HOM05D003990 ORTHO05D004925 9.0e-71 271.6 239 54.4
Pp3c17_4700 Physcomitrium patens HOM05D003990 ORTHO05D004925 2.0e-70 270.4 263 51.7
Mapoly0141s0022 Marchantia polymorpha HOM05D003990 ORTHO05D004925 7.6e-70 268.5 261 54.4
Glyma.07G166800 Glycine max HOM05D003990 ORTHO05D004925 3.2e-68 263.1 172 73.8
Haze_09152 Corylus avellana HOM05D003990 ORTHO05D004925 4.2e-68 262.7 205 62.0
Thhalv10027122m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 1.8e-66 257.3 265 48.7
Thecc.03G222500 Theobroma cacao HOM05D003990 ORTHO05D004925 3.4e-62 243.0 163 70.6
CARHR006270 Cardamine hirsuta HOM05D003990 ORTHO05D004925 5.8e-62 242.3 237 51.5
Sc16g0011220 Simmondsia chinensis HOM05D003990 ORTHO05D004925 1.0e-61 241.5 241 53.1
arahy.Tifrunner.gnm1.ann1.E0UK9T Arachis hypogaea HOM05D003990 ORTHO05D004925 4.9e-61 239.2 262 49.2
arahy.Tifrunner.gnm1.ann1.UE00R2 Arachis hypogaea HOM05D003990 ORTHO05D004925 8.4e-61 238.4 254 49.6
arahy.Tifrunner.gnm1.ann1.VJUY72 Arachis hypogaea HOM05D003990 ORTHO05D004925 1.4e-60 237.7 262 49.2
unitig_52.g17196 Utricularia gibba HOM05D003990 ORTHO05D004925 2.1e-59 233.8 199 58.8
CDE07G1159 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 4.8e-56 222.6 350 41.1
Zm00001eb207470 Zea mays HOM05D003990 ORTHO05D004925 1.4e-55 221.1 237 51.5
QL02p029191 Quercus lobata HOM05D003990 ORTHO05D004925 5.0e-53 212.6 409 35.9
Potri.001G084900 Populus trichocarpa HOM05D003990 ORTHO05D004925 1.9e-52 210.7 196 58.7
FAN18G2679 Fragaria x ananassa HOM05D003990 ORTHO05D004925 2.1e-51 207.2 145 69.0
Sp7g22040 Schrenkiella parvula HOM05D003990 ORTHO05D004925 2.1e-51 207.2 169 56.8
CARHR231480 Cardamine hirsuta HOM05D003990 ORTHO05D004925 3.0e-50 203.4 187 51.9
arahy.Tifrunner.gnm1.ann1.QV8INP Arachis hypogaea HOM05D003990 ORTHO05D004925 5.7e-49 199.1 254 44.1
Aa31LG6G7290 Aethionema arabicum HOM05D003990 ORTHO05D004925 9.1e-47 191.8 151 58.9
AT4G24080 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 7.2e-44 182.2 174 52.3
Zm00001eb366680 Zea mays HOM05D003990 ORTHO05D004925 7.9e-43 178.7 237 47.3
PRCOL_00003301 Prasinoderma coloniale HOM05D003990 ORTHO05D004925 7.7e-38 162.2 244 38.5
Hma1.2p1_0440F.1_g153760 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 7.9e-35 152.1 208 47.6
CAN.G479.14 Capsicum annuum HOM05D003990 ORTHO05D004925 2.6e-33 147.1 140 55.0
Zm00001eb314200 Zea mays HOM05D003990 ORTHO05D004925 2.6e-30 137.1 251 35.9
AagrBONN_evm.TU.Sc2ySwM_228.2729 Anthoceros agrestis HOM05D003990 ORTHO05D004925 1.7e-29 134.4 205 39.5
Haze_16436 Corylus avellana HOM05D003990 ORTHO05D004925 7.2e-28 129.0 183 43.7
arahy.Tifrunner.gnm1.ann1.R8SYM2 Arachis hypogaea HOM05D003990 ORTHO05D004925 2.6e-25 120.6 122 53.3
FAN18G2309 Fragaria x ananassa HOM05D003990 ORTHO05D004925 4.4e-25 119.8 148 53.4
Duzib068G0872 Durio zibethinus HOM05D003990 ORTHO05D004925 2.2e-21 107.5 95 56.8
Thhalv10027505m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 2.2e-21 107.5 118 44.9
Cre01.g015550 Chlamydomonas reinhardtii HOM05D003990 ORTHO05D004925 4.2e-20 103.2 181 35.9
Cfa021766 Carpinus fangiana HOM05D003990 ORTHO05D004925 2.6e-17 94.0 208 29.3
EL10Ac6g14266 Beta vulgaris HOM05D003990 ORTHO05D004925 7.5e-17 92.4 69 63.8
Migut.E00635 Erythranthe guttata HOM05D003990 ORTHO05D004925 7.5e-17 92.4 100 51.0
arahy.Tifrunner.gnm1.ann1.S5BUNY Arachis hypogaea HOM05D003990 ORTHO05D004925 1.3e-16 91.7 65 69.2
arahy.Tifrunner.gnm1.ann1.228U7D Arachis hypogaea HOM05D003990 ORTHO05D004925 5.9e-14 82.8 68 63.2
Hma1.2p1_0212F.1_g090250 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 2.3e-13 80.9 61 63.9
Prupe.2G052300 Prunus persica HOM05D003990 ORTHO05D004925 5.5e-12 76.3 66 54.5
unitig_52.g17197 Utricularia gibba HOM05D003990 ORTHO05D004925 6.1e-11 72.8 80 56.2
QL02p029165 Quercus lobata HOM05D003990 ORTHO05D010865 8.8e-10 68.9 58 62.1
AagrBONN_evm.TU.Sc2ySwM_344.3329 Anthoceros agrestis HOM05D003990 ORTHO05D071624 7.5e-09 65.9 264 26.5
VMungo0647G2082 Vigna mungo HOM05D003990 ORTHO05D004925 4.9e-08 63.2 88 44.3
AT4G24070 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 1.8e-07 61.2 71 45.1
QL02p029160 Quercus lobata HOM05D003990 ORTHO05D004925 5.4e-07 59.7 72 41.7


User provided reference genes

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