Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 1.1e-127 459.9 213 100.0
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 2.2e-101 372.5 210 81.0
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 6.4e-101 370.9 210 81.0
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 2.4e-100 369.0 210 80.0
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 3.2e-100 368.6 210 80.0
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 1.2e-99 366.7 210 80.5
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 1.2e-99 366.7 210 79.5
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.2e-99 366.7 210 79.5
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 1.2e-99 366.7 210 80.5
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 3.5e-99 365.2 210 79.5
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 7.9e-99 364.0 210 79.5
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 7.9e-99 364.0 210 79.0
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 1.0e-98 363.6 210 78.6
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.0e-98 363.6 210 79.0
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 1.7e-98 362.8 210 79.5
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 1.7e-98 362.8 210 77.1
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 3.9e-98 361.7 210 78.6
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 1.5e-97 359.8 210 80.0
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 1.5e-97 359.8 210 77.1
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 3.3e-97 358.6 210 78.1
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 3.3e-97 358.6 210 79.0
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 4.3e-97 358.2 210 77.6
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 7.3e-97 357.5 210 78.6
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 9.6e-97 357.1 205 79.5
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 9.6e-97 357.1 210 78.6
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 9.6e-97 357.1 210 78.6
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 1.3e-96 356.7 210 78.1
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 1.3e-96 356.7 210 78.1
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 1.6e-96 356.3 210 78.6
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 2.1e-96 355.9 210 76.2
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 2.8e-96 355.5 210 77.6
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 3.6e-96 355.1 210 76.7
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 4.8e-96 354.8 210 75.7
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 6.2e-96 354.4 210 77.6
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 8.1e-96 354.0 210 76.7
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 1.1e-95 353.6 210 76.2
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 1.4e-95 353.2 210 78.1
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 1.4e-95 353.2 210 78.1
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 1.8e-95 352.8 207 77.8
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 2.4e-95 352.4 210 77.6
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 3.1e-95 352.1 210 75.7
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 5.3e-95 351.3 210 76.2
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 6.9e-95 350.9 210 77.1
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 6.9e-95 350.9 210 76.7
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 1.2e-94 350.1 210 75.7
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 1.2e-94 350.1 210 77.1
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 1.5e-94 349.7 210 77.1
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 1.5e-94 349.7 210 75.2
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 2.0e-94 349.4 210 75.7
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 2.0e-94 349.4 210 76.7
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 2.6e-94 349.0 210 75.7
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 3.4e-94 348.6 210 76.7
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 3.4e-94 348.6 210 75.7
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 4.5e-94 348.2 210 76.7
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 5.8e-94 347.8 210 77.6
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 5.8e-94 347.8 210 75.7
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 7.6e-94 347.4 210 76.7
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 7.6e-94 347.4 210 76.7
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 9.9e-94 347.1 244 67.2
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 9.9e-94 347.1 210 76.2
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 1.3e-93 346.7 209 74.6
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 1.3e-93 346.7 210 74.8
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 1.7e-93 346.3 210 74.3
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 1.7e-93 346.3 210 75.2
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 2.9e-93 345.5 210 75.7
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 1.4e-92 343.2 210 72.9
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 3.2e-92 342.0 211 74.9
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 3.2e-92 342.0 211 74.9
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 3.2e-92 342.0 211 74.9
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 4.2e-92 341.7 210 74.8
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 4.2e-92 341.7 210 74.8
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 4.2e-92 341.7 215 75.8
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 5.4e-92 341.3 209 73.2
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 5.4e-92 341.3 205 77.6
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 7.1e-92 340.9 211 74.9
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 9.3e-92 340.5 211 74.9
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 1.2e-91 340.1 240 67.1
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 1.6e-91 339.7 208 73.1
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 4.6e-91 338.2 251 64.9
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 1.3e-90 336.7 209 71.8
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 3.9e-90 335.1 211 73.9
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 3.9e-90 335.1 210 73.3
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 8.7e-90 334.0 206 73.8
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 8.7e-90 334.0 210 73.3
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 1.1e-89 333.6 205 74.1
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 1.5e-89 333.2 206 74.8
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 3.3e-89 332.0 211 73.5
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 5.6e-89 331.3 210 70.5
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 7.4e-89 330.9 210 72.4
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 9.6e-89 330.5 206 73.8
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 5.3e-87 324.7 295 55.6
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 1.5e-86 323.2 191 78.0
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 1.1e-81 307.0 210 66.7
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 4.6e-75 285.0 167 77.8
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 7.9e-75 284.3 202 63.4
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 1.1e-73 280.4 167 75.4
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 7.4e-73 277.7 167 73.1
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 1.8e-71 273.1 191 64.9
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 5.9e-70 268.1 167 73.7
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 2.9e-69 265.8 181 68.0
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 1.1e-68 263.8 200 61.5
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 6.1e-67 258.1 195 63.1
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 4.5e-62 241.9 171 64.9
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 1.1e-49 200.7 107 87.9
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 1.0e-34 151.0 105 64.8
Sopen01g036890 Solanum pennellii HOM05D006696 ORTHO05D008683 6.1e-27 125.2 80 73.8
VMungo0720G2385 Vigna mungo HOM05D006696 ORTHO05D008683 1.7e-24 117.1 64 82.8
VMungo1309G0520 Vigna mungo HOM05D006696 ORTHO05D008683 1.3e-21 107.5 63 77.8
Cpa.g.sc14.75 Carica papaya HOM05D006696 ORTHO05D008683 2.0e-14 83.6 37 100.0
SalBow5G1567 Salvia bowleyana HOM05D006696 ORTHO05D008683 1.0e-13 81.3 43 83.7
Atru.chr4.903 Acer truncatum HOM05D006696 ORTHO05D030753 2.1e-11 73.6 39 79.5


User provided reference genes

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