Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G0614 Cannabis sativa HOM05D007467 ORTHO05D009441 1.6e-154 549.7 338 100.0
Duzib205G1912 Durio zibethinus HOM05D007467 ORTHO05D009441 1.6e-66 257.3 342 54.4
Prupe.5G131500 Prunus persica HOM05D007467 ORTHO05D009441 3.1e-65 253.1 363 56.5
Thecc.03G219300 Theobroma cacao HOM05D007467 ORTHO05D009441 1.5e-64 250.8 340 57.1
Atru.chr9.1852 Acer truncatum HOM05D007467 ORTHO05D009441 2.9e-63 246.5 332 55.7
RcHm_v2.0_Chr7g0187371 Rosa chinensis HOM05D007467 ORTHO05D009441 2.9e-63 246.5 316 54.1
MD06G1120900 Malus domestica HOM05D007467 ORTHO05D009441 8.4e-63 245.0 337 52.5
Sabra01G0059300 Salix brachista HOM05D007467 ORTHO05D009441 5.5e-62 242.3 332 55.4
FAN04G1879 Fragaria x ananassa HOM05D007467 ORTHO05D009441 1.2e-61 241.1 316 56.3
Potri.001G082600 Populus trichocarpa HOM05D007467 ORTHO05D009441 1.6e-61 240.7 332 55.1
MD14G1137500 Malus domestica HOM05D007467 ORTHO05D009441 4.6e-61 239.2 348 46.3
FvH4_5g10770 Fragaria vesca HOM05D007467 ORTHO05D009441 7.9e-61 238.4 316 55.7
FAN18G0937 Fragaria x ananassa HOM05D007467 ORTHO05D009441 7.9e-61 238.4 316 55.7
Duzib084G1076 Durio zibethinus HOM05D007467 ORTHO05D009441 3.0e-60 236.5 338 49.7
FAN13G1608 Fragaria x ananassa HOM05D007467 ORTHO05D009441 1.1e-59 234.6 316 55.1
Ciclev10020958m.g Citrus clementina HOM05D007467 ORTHO05D009441 4.3e-59 232.6 332 53.3
FAN08G2920 Fragaria x ananassa HOM05D007467 ORTHO05D009441 7.4e-59 231.9 316 55.4
Manes.02G001700 Manihot esculenta HOM05D007467 ORTHO05D009441 2.8e-58 229.9 336 49.7
QL02p027667 Quercus lobata HOM05D007467 ORTHO05D009441 1.4e-57 227.6 352 52.3
Oeu013372.1 Olea europaea HOM05D007467 ORTHO05D009441 2.4e-57 226.9 338 53.0
Peaxi162Scf00074g00113 Petunia axillaris HOM05D007467 ORTHO05D009441 4.1e-57 226.1 344 51.5
CSS0030138 Camellia sinensis var. sinensis HOM05D007467 ORTHO05D009441 9.0e-57 224.9 325 53.5
Sabra03G0107500 Salix brachista HOM05D007467 ORTHO05D009441 1.3e-55 221.1 330 53.0
Cfa011912 Carpinus fangiana HOM05D007467 ORTHO05D009441 1.9e-54 217.2 333 52.9
MSTRG.13707 Avicennia marina HOM05D007467 ORTHO05D009441 2.1e-53 213.8 327 51.4
CAN.G567.94 Capsicum annuum HOM05D007467 ORTHO05D009441 2.7e-53 213.4 315 49.8
Haze_09186 Corylus avellana HOM05D007467 ORTHO05D009441 3.6e-53 213.0 328 52.1
Gohir.A12G240800 Gossypium hirsutum HOM05D007467 ORTHO05D009441 3.6e-53 213.0 322 44.1
HanXRQChr07g0192371 Helianthus annuus HOM05D007467 ORTHO05D009441 1.3e-52 211.1 324 52.2
Gohir.D12G242100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 3.0e-52 209.9 322 43.5
Gorai.008G259400 Gossypium raimondii HOM05D007467 ORTHO05D009441 3.9e-52 209.5 322 44.4
Lsat_1_v5_gn_6_10100 Lactuca sativa HOM05D007467 ORTHO05D009441 1.1e-51 208.0 323 44.3
Nn1g00417 Nelumbo nucifera HOM05D007467 ORTHO05D009441 1.5e-51 207.6 316 47.8
DCAR_006558 Daucus carota HOM05D007467 ORTHO05D009441 5.7e-51 205.7 316 42.7
Oeu042839.1 Olea europaea HOM05D007467 ORTHO05D009441 9.7e-51 204.9 309 51.5
PGSC0003DMG400012234 Solanum tuberosum HOM05D007467 ORTHO05D009441 6.3e-50 202.2 309 48.5
TAR636G1420 Trochodendron aralioides HOM05D007467 ORTHO05D009441 5.3e-49 199.1 314 44.9
TWI60G0745 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 1.5e-48 197.6 361 50.4
TWI15G0957 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 1.0e-47 194.9 369 43.9
Cc08_g16860 Coffea canephora HOM05D007467 ORTHO05D009441 4.2e-46 189.5 316 46.5
Aqoxy7G00009 Aquilegia oxysepala HOM05D007467 ORTHO05D009441 2.7e-45 186.8 318 50.9
Aa31LG2G1740 Aethionema arabicum HOM05D007467 ORTHO05D009441 1.0e-44 184.9 300 49.0
ECA233G1457 Erigeron canadensis HOM05D007467 ORTHO05D009441 1.0e-44 184.9 320 47.5
Lj2P155T22 Lonicera japonica HOM05D007467 ORTHO05D009441 1.0e-44 184.9 324 49.7
Dinv18747 Davidia involucrata HOM05D007467 ORTHO05D009441 2.3e-44 183.7 284 51.4
TAR629G1879 Trochodendron aralioides HOM05D007467 ORTHO05D009441 3.9e-44 183.0 322 51.2
PGR042G1595 Punica granatum HOM05D007467 ORTHO05D009441 8.8e-44 181.8 324 47.8
Hma1.2p1_0456F.1_g156740 Hydrangea macrophylla HOM05D007467 ORTHO05D009441 4.4e-43 179.5 298 48.3
COL.COLO4_10812 Corchorus olitorius HOM05D007467 ORTHO05D009441 2.2e-42 177.2 255 47.8
vmacro11497 Vaccinium macrocarpon HOM05D007467 ORTHO05D009441 2.2e-42 177.2 262 54.2
Potri.003G147900 Populus trichocarpa HOM05D007467 ORTHO05D009441 6.3e-42 175.6 279 54.1
Eucgr.E01052 Eucalyptus grandis HOM05D007467 ORTHO05D009441 1.1e-41 174.9 369 45.0
Nn3g18852 Nelumbo nucifera HOM05D007467 ORTHO05D009441 5.3e-41 172.6 295 49.2
Sopen08g031410 Solanum pennellii HOM05D007467 ORTHO05D009441 2.0e-40 170.6 314 44.6
Gorai.006G205400 Gossypium raimondii HOM05D007467 ORTHO05D009441 1.0e-39 168.3 299 48.8
Rhsim02G0253000 Rhododendron simsii HOM05D007467 ORTHO05D009441 1.0e-39 168.3 265 54.3
Solyc08g083220.1 Solanum lycopersicum HOM05D007467 ORTHO05D009441 2.2e-39 167.2 313 43.8
GSVIVG01019666001 Vitis vinifera HOM05D007467 ORTHO05D009441 2.2e-39 167.2 255 54.5
Gohir.A09G188250 Gossypium hirsutum HOM05D007467 ORTHO05D009441 2.9e-39 166.8 297 49.2
Gohir.D09G183100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 2.9e-39 166.8 299 48.5
Nitab4.5_0002720g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 2.9e-39 166.8 257 53.7
Nitab4.5_0008141g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 2.5e-38 163.7 260 53.1
PSO478G5135 Papaver somniferum HOM05D007467 ORTHO05D009441 2.5e-38 163.7 316 44.9
PSO782G5165 Papaver somniferum HOM05D007467 ORTHO05D009441 2.1e-37 160.6 312 45.5
CiPaw.11G111200 Carya illinoinensis HOM05D007467 ORTHO05D009441 8.8e-36 155.2 255 51.4
CsaV3_5G001620 Cucumis sativus L. HOM05D007467 ORTHO05D009441 5.7e-35 152.5 322 46.6
BcaC04g22507 Brassica carinata HOM05D007467 ORTHO05D009441 7.4e-35 152.1 298 41.9
MBI12_g21574_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 2.8e-34 150.2 312 45.5
MBI04_g15581_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 5.3e-33 146.0 268 37.7
CARHR046220 Cardamine hirsuta HOM05D007467 ORTHO05D009441 9.1e-33 145.2 300 38.0
SGA_v2.0_scaffold267G46175 Striga asiatica HOM05D007467 ORTHO05D009441 9.1e-33 145.2 295 40.0
ClCG01G001480 Citrullus lanatus HOM05D007467 ORTHO05D009441 2.0e-32 144.1 261 50.6
MBI04_g43054_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 4.5e-32 142.9 244 38.9
MELO3C005789.2 Cucumis melo HOM05D007467 ORTHO05D009441 6.5e-31 139.0 326 46.3
Sed0003485 Sechium edule HOM05D007467 ORTHO05D009441 1.1e-30 138.3 319 42.0
A09p15270 Brassica napus HOM05D007467 ORTHO05D009441 4.7e-29 132.9 298 39.9
BraA09t37173Z Brassica rapa HOM05D007467 ORTHO05D009441 4.7e-29 132.9 298 39.9
Carub.0002s0004 Capsella rubella HOM05D007467 ORTHO05D009441 8.0e-29 132.1 300 41.0
C09p18550 Brassica napus HOM05D007467 ORTHO05D009441 2.3e-28 130.6 298 38.9
BolC9t54751H Brassica oleracea HOM05D007467 ORTHO05D009441 2.3e-28 130.6 298 38.9
Thhalv10023631m.g Eutrema salsugineum HOM05D007467 ORTHO05D009441 1.2e-27 128.3 300 33.3
Sp2g00870 Schrenkiella parvula HOM05D007467 ORTHO05D009441 3.3e-27 126.7 300 41.0
BcaB07g31413 Brassica carinata HOM05D007467 ORTHO05D009441 2.7e-24 117.1 298 39.9
CDE02G3312 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 4.2e-22 109.8 259 36.3
AUR62007067 Chenopodium quinoa HOM05D007467 ORTHO05D009441 1.2e-21 108.2 274 32.8
THA.LOC104823626 Tarenaya hassleriana HOM05D007467 ORTHO05D009441 1.8e-20 104.4 311 36.0
Zm00001eb023700 Zea mays HOM05D007467 ORTHO05D009441 1.5e-19 101.3 311 34.1
Oeu022032.1 Olea europaea HOM05D007467 ORTHO05D009441 2.0e-19 100.9 174 40.2
AUR62019932 Chenopodium quinoa HOM05D007467 ORTHO05D009441 7.5e-19 99.0 273 32.6
AT1G64690 Arabidopsis thaliana HOM05D007467 ORTHO05D009441 1.3e-18 98.2 298 37.6
AL2G10070 Arabidopsis lyrata HOM05D007467 ORTHO05D009441 6.3e-18 95.9 300 37.7
PGSC0003DMG400013732 Solanum tuberosum HOM05D007467 ORTHO05D009441 5.4e-17 92.8 155 42.6
Ah.12g053280 Amaranthus hybridus HOM05D007467 ORTHO05D009441 1.2e-13 81.6 345 28.7
EL10Ac5g12411 Beta vulgaris HOM05D007467 ORTHO05D009441 3.0e-12 77.0 224 32.1
Os10g0562600 Oryza sativa ssp. japonica HOM05D007467 ORTHO05D009441 2.6e-11 73.9 221 36.2
ATR0579G156 Amborella trichopoda HOM05D007467 ORTHO05D009441 3.4e-11 73.6 309 25.9
ClCG00G001110 Citrullus lanatus HOM05D007467 ORTHO05D009441 4.4e-11 73.2 147 51.7
Actinidia22211 Actinidia chinensis HOM05D007467 ORTHO05D009441 4.9e-10 69.7 98 51.0
BcaB07g31547 Brassica carinata HOM05D007467 ORTHO05D009441 8.3e-10 68.9 136 38.2
CDE11G0649 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 5.9e-08 62.8 94 42.6
Sed0003279 Sechium edule HOM05D002166 ORTHO05D002634 2.9e-07 60.5 188 30.9
CANSAT11G1162 Cannabis sativa HOM05D002166 ORTHO05D002634 7.3e-06 55.8 125 32.8
Lalb_Chr04g0248451 Lupinus albus HOM05D002166 ORTHO05D002634 7.3e-06 55.8 125 32.8


User provided reference genes

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