Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G0533 Cannabis sativa HOM05D001216 ORTHO05D008355 1.4e-74 282.7 130 100.0
CANSAT21G1267 Cannabis sativa HOM05D001216 ORTHO05D008355 6.8e-61 237.3 114 94.7
RcHm_v2.0_Chr1g0383931 Rosa chinensis HOM05D001216 ORTHO05D008355 2.7e-49 198.7 113 77.0
FAN01G2135 Fragaria x ananassa HOM05D001216 ORTHO05D008355 1.0e-48 196.8 113 76.1
FAN03G0335 Fragaria x ananassa HOM05D001216 ORTHO05D008355 1.0e-48 196.8 113 76.1
FAN10G1381 Fragaria x ananassa HOM05D001216 ORTHO05D008355 1.3e-48 196.4 113 75.2
MD07G1306500 Malus domestica HOM05D001216 ORTHO05D008355 1.5e-47 193.0 114 76.3
Prupe.2G324500 Prunus persica HOM05D001216 ORTHO05D008355 5.6e-47 191.0 114 76.3
Cfa015879 Carpinus fangiana HOM05D001216 ORTHO05D008355 2.1e-46 189.1 114 72.8
PGR142G1409 Punica granatum HOM05D001216 ORTHO05D008355 8.0e-46 187.2 113 71.7
Eucgr.K00092 Eucalyptus grandis HOM05D001216 ORTHO05D008355 1.2e-44 183.3 113 70.8
Manes.09G124400 Manihot esculenta HOM05D001216 ORTHO05D008355 1.5e-44 183.0 114 70.2
Gohir.D13G160100 Gossypium hirsutum HOM05D001216 ORTHO05D008355 2.0e-44 182.6 114 71.1
Gorai.013G181000 Gossypium raimondii HOM05D001216 ORTHO05D008355 2.0e-44 182.6 114 71.1
CiPaw.05G238500 Carya illinoinensis HOM05D001216 ORTHO05D008355 4.4e-44 181.4 106 74.5
Ciclev10018854m.g Citrus clementina HOM05D001216 ORTHO05D008355 2.9e-43 178.7 111 71.2
Medtr5g007870 Medicago truncatula HOM05D001216 ORTHO05D008355 2.9e-43 178.7 113 71.7
Potri.013G089000 Populus trichocarpa HOM05D001216 ORTHO05D008355 3.7e-43 178.3 114 69.3
Glyma.01G229200 Glycine max HOM05D001216 ORTHO05D008355 6.4e-43 177.6 114 69.3
Duzib106G0833 Durio zibethinus HOM05D001216 ORTHO05D008355 8.3e-43 177.2 114 71.1
Gohir.A13G155300 Gossypium hirsutum HOM05D001216 ORTHO05D008355 1.1e-42 176.8 114 69.3
MELO3C024870.2 Cucumis melo HOM05D001216 ORTHO05D008355 1.4e-42 176.4 122 65.6
arahy.Tifrunner.gnm1.ann1.4MFR3H Arachis hypogaea HOM05D001216 ORTHO05D008355 1.9e-42 176.0 114 68.4
ClCG10G009060 Citrullus lanatus HOM05D001216 ORTHO05D008355 1.9e-42 176.0 122 65.6
COL.COLO4_06399 Corchorus olitorius HOM05D001216 ORTHO05D008355 1.9e-42 176.0 114 67.5
Phvul.002G038200 Phaseolus vulgaris HOM05D001216 ORTHO05D008355 2.4e-42 175.6 114 68.4
Sed0005129 Sechium edule HOM05D001216 ORTHO05D008355 3.2e-42 175.3 129 62.0
Cc02_g00370 Coffea canephora HOM05D001216 ORTHO05D008355 4.1e-42 174.9 120 66.7
GSVIVG01024422001 Vitis vinifera HOM05D001216 ORTHO05D008355 4.1e-42 174.9 122 64.8
Atru.chr12.1986 Acer truncatum HOM05D001216 ORTHO05D008355 7.0e-42 174.1 114 70.2
arahy.Tifrunner.gnm1.ann1.LQ97JF Arachis hypogaea HOM05D001216 ORTHO05D008355 7.0e-42 174.1 114 67.5
Glyma.11G012000 Glycine max HOM05D001216 ORTHO05D008355 7.0e-42 174.1 114 67.5
CsaV3_4G008710 Cucumis sativus L. HOM05D001216 ORTHO05D008355 9.2e-42 173.7 122 63.9
Nn1g01970 Nelumbo nucifera HOM05D001216 ORTHO05D008355 1.6e-41 172.9 120 65.8
Psat0s769g0040 Pisum sativum HOM05D001216 ORTHO05D008355 2.7e-41 172.2 113 66.4
VMungo1215G2356 Vigna mungo HOM05D001216 ORTHO05D008355 2.7e-41 172.2 114 65.8
FvH4_3g43881 Fragaria vesca HOM05D001216 ORTHO05D008355 3.5e-41 171.8 116 66.4
LjContig00222g0021656 Lotus japonicus HOM05D001216 ORTHO05D008355 3.5e-41 171.8 114 66.7
Thecc.05G209300 Theobroma cacao HOM05D001216 ORTHO05D008355 3.5e-41 171.8 121 65.3
TPR.G37925 Trifolium pratense HOM05D001216 ORTHO05D008355 4.6e-41 171.4 113 68.1
Ca_24450_v3 Cicer arietinum L. HOM05D001216 ORTHO05D008355 1.0e-40 170.2 114 66.7
Lsat_1_v5_gn_2_135361 Lactuca sativa HOM05D001216 ORTHO05D008355 2.3e-40 169.1 114 69.3
Dinv29167 Davidia involucrata HOM05D001216 ORTHO05D008355 3.0e-40 168.7 114 64.9
Lj3C889T5 Lonicera japonica HOM05D001216 ORTHO05D008355 8.6e-40 167.2 120 64.2
Lalb_Chr16g0376611 Lupinus albus HOM05D001216 ORTHO05D008355 8.6e-40 167.2 114 67.5
Actinidia08740 Actinidia chinensis HOM05D001216 ORTHO05D008355 1.5e-39 166.4 112 67.9
Actinidia34302 Actinidia chinensis HOM05D001216 ORTHO05D008355 1.5e-39 166.4 119 65.5
Hma1.2p1_1235F.1_g269080 Hydrangea macrophylla HOM05D001216 ORTHO05D008355 4.3e-39 164.9 117 66.7
HanXRQChr14g0462961 Helianthus annuus HOM05D001216 ORTHO05D008355 5.6e-39 164.5 118 65.3
CSS0014281 Camellia sinensis var. sinensis HOM05D001216 ORTHO05D008355 7.3e-39 164.1 121 65.3
CSS0049591 Camellia sinensis var. sinensis HOM05D001216 ORTHO05D008355 7.3e-39 164.1 121 65.3
DCAR_010546 Daucus carota HOM05D001216 ORTHO05D008355 7.3e-39 164.1 130 59.2
Solyc03g096900.4 Solanum lycopersicum HOM05D001216 ORTHO05D008355 9.5e-39 163.7 120 60.0
Sopen03g027650 Solanum pennellii HOM05D001216 ORTHO05D008355 9.5e-39 163.7 120 60.0
ECA238G0596 Erigeron canadensis HOM05D001216 ORTHO05D008355 1.6e-38 162.9 119 65.5
Sc25g0001170 Simmondsia chinensis HOM05D001216 ORTHO05D008355 1.6e-38 162.9 120 65.8
CAN.G303.74 Capsicum annuum HOM05D001216 ORTHO05D008355 3.6e-38 161.8 119 60.5
EL10Ac3g05091 Beta vulgaris HOM05D001216 ORTHO05D008355 6.2e-38 161.0 119 63.0
Oeu061067.1 Olea europaea HOM05D001216 ORTHO05D008355 1.1e-37 160.2 120 60.0
Peaxi162Scf00745g00860 Petunia axillaris HOM05D001216 ORTHO05D008355 1.4e-37 159.8 119 61.3
Nitab4.5_0005081g0010 Nicotiana tabacum HOM05D001216 ORTHO05D008355 1.8e-37 159.5 119 62.2
MBI04_g37552_MAGBIO Magnolia biondii HOM05D001216 ORTHO05D008355 3.1e-37 158.7 120 61.7
TAR374G0425 Trochodendron aralioides HOM05D001216 ORTHO05D008355 5.2e-37 157.9 131 58.0
Nitab4.5_0000021g0450 Nicotiana tabacum HOM05D001216 ORTHO05D008355 6.8e-37 157.5 119 60.5
SalBow2G2269 Salvia bowleyana HOM05D001216 ORTHO05D008355 1.2e-36 156.8 118 61.9
SGA_v2.0_scaffold59G20777 Striga asiatica HOM05D001216 ORTHO05D008355 1.5e-36 156.4 122 61.5
unitig_52.g16851 Utricularia gibba HOM05D001216 ORTHO05D008355 1.5e-36 156.4 131 58.0
Rhsim03G0220900 Rhododendron simsii HOM05D001216 ORTHO05D008355 2.0e-36 156.0 118 61.9
Hund21094 Selenicereus undatus HOM05D001216 ORTHO05D008355 5.8e-36 154.5 119 60.5
MSTRG.8578 Avicennia marina HOM05D001216 ORTHO05D008355 7.5e-36 154.1 119 57.1
Ah.13g072640 Amaranthus hybridus HOM05D001216 ORTHO05D008355 9.8e-36 153.7 120 61.7
ATR0829G059 Amborella trichopoda HOM05D001216 ORTHO05D008355 3.7e-35 151.8 118 59.3
Aqoxy7G00876 Aquilegia oxysepala HOM05D001216 ORTHO05D008355 6.4e-35 151.0 122 56.6
Migut.F00951 Erythranthe guttata HOM05D001216 ORTHO05D008355 1.9e-34 149.4 121 57.9
PSO675G9306 Papaver somniferum HOM05D001216 ORTHO05D008355 7.0e-34 147.5 120 56.7
Os02g0699400 Oryza sativa ssp. japonica HOM05D001216 ORTHO05D008355 9.2e-34 147.1 120 54.2
QL09p024777 Quercus lobata HOM05D001216 ORTHO05D008355 1.0e-32 143.7 148 49.3
CDE02G2862 Ceratophyllum demersum HOM05D001216 ORTHO05D008355 1.2e-30 136.7 116 55.2
Pp3c16_11940 Physcomitrium patens HOM05D001216 ORTHO05D008355 1.6e-30 136.3 116 52.6
CDE11G0509 Ceratophyllum demersum HOM05D001216 ORTHO05D008355 6.2e-30 134.4 119 52.9
FAN17G2009 Fragaria x ananassa HOM05D001216 ORTHO05D008355 2.3e-29 132.5 80 71.2
SEGI_10998 Sequoiadendron giganteum HOM05D001216 ORTHO05D008355 5.2e-29 131.3 120 51.7
vmacro06504 Vaccinium macrocarpon HOM05D001216 ORTHO05D008355 5.2e-29 131.3 117 55.6
Mapoly0035s0150 Marchantia polymorpha HOM05D001216 ORTHO05D008355 9.9e-28 127.1 121 52.9
CBR_g26129 Chara braunii HOM05D000019 ORTHO05D000002 5.2e-21 104.8 80 53.8
TWI34G0259 Tripterygium wilfordii HOM05D001216 ORTHO05D008355 6.8e-21 104.4 57 75.4
Cpa.g.sc659.3 Carica papaya HOM05D001216 ORTHO05D008355 8.9e-21 104.0 43 93.0
Haze_00609 Corylus avellana HOM05D001216 ORTHO05D008355 2.0e-20 102.8 44 88.6
PGSC0003DMG400000537 Solanum tuberosum HOM05D001216 ORTHO05D008355 2.0e-20 102.8 44 88.6
Sabra13G0069500 Salix brachista HOM05D001216 ORTHO05D008355 2.6e-20 102.4 59 67.8
FvH4_3g43851 Fragaria vesca HOM05D001216 ORTHO05D008355 1.3e-19 100.1 71 66.2
Cpa.g.sc659.1 Carica papaya HOM05D001216 ORTHO05D008355 9.6e-15 84.0 70 60.0
Sabra13G0069600 Salix brachista HOM05D001216 ORTHO05D008355 9.6e-15 84.0 71 59.2
Actinidia04569 Actinidia chinensis HOM05D001216 ORTHO05D008355 8.1e-14 80.9 38 81.6
AUR62005907 Chenopodium quinoa HOM05D001216 ORTHO05D008355 6.9e-13 77.8 86 48.8
AUR62028158 Chenopodium quinoa HOM05D001216 ORTHO05D008355 9.9e-12 73.9 75 52.0
Zm00001eb188060 Zea mays HOM05D001216 ORTHO05D008355 5.1e-08 61.6 37 56.8


User provided reference genes

Program Settings