Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G0515 Cannabis sativa HOM05D006075 ORTHO05D007527 1.5e-267 925.6 469 100.0
Prupe.5G091900 Prunus persica HOM05D006075 ORTHO05D007527 4.3e-206 721.5 466 77.5
QL12p017421 Quercus lobata HOM05D006075 ORTHO05D007527 1.2e-205 719.9 465 77.8
MD06G1073700 Malus domestica HOM05D006075 ORTHO05D007527 5.8e-203 711.1 466 76.8
FAN18G0544 Fragaria x ananassa HOM05D006075 ORTHO05D007527 1.4e-201 706.4 466 77.3
RcHm_v2.0_Chr7g0199111 Rosa chinensis HOM05D006075 ORTHO05D007527 1.9e-201 706.1 466 77.0
CiPaw.11G140500 Carya illinoinensis HOM05D006075 ORTHO05D007527 3.2e-201 705.3 463 77.3
FAN08G0877 Fragaria x ananassa HOM05D006075 ORTHO05D007527 4.1e-201 704.9 466 77.0
FAN04G1557 Fragaria x ananassa HOM05D006075 ORTHO05D007527 4.6e-200 701.4 466 76.6
GSVIVG01019817001 Vitis vinifera HOM05D006075 ORTHO05D007527 2.3e-196 689.1 451 76.3
Ciclev10019953m.g Citrus clementina HOM05D006075 ORTHO05D007527 3.1e-196 688.7 463 76.5
Dinv37681 Davidia involucrata HOM05D006075 ORTHO05D007527 3.1e-196 688.7 449 77.5
Glyma.17G131000 Glycine max HOM05D006075 ORTHO05D007527 5.2e-196 688.0 466 75.5
Lj4g0025720 Lotus japonicus HOM05D006075 ORTHO05D007527 5.2e-196 688.0 466 73.6
Atru.chr9.1549 Acer truncatum HOM05D006075 ORTHO05D007527 2.9e-194 682.2 454 75.3
Potri.001G109200 Populus trichocarpa HOM05D006075 ORTHO05D007527 8.3e-194 680.6 466 73.2
Phvul.003G211900 Phaseolus vulgaris HOM05D006075 ORTHO05D007527 1.4e-193 679.9 462 74.5
Medtr4g102820 Medicago truncatula HOM05D006075 ORTHO05D007527 2.4e-193 679.1 466 72.7
CSS0042428 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 1.6e-192 676.4 441 76.6
Eucgr.E00536 Eucalyptus grandis HOM05D006075 ORTHO05D007527 3.5e-192 675.2 462 72.7
TPR.G19222 Trifolium pratense HOM05D006075 ORTHO05D007527 3.5e-192 675.2 466 71.9
TWI81G0173 Tripterygium wilfordii HOM05D006075 ORTHO05D007527 7.8e-192 674.1 466 73.2
MD04G1066500 Malus domestica HOM05D006075 ORTHO05D007527 1.7e-191 672.9 444 76.6
Rhsim07G0094000 Rhododendron simsii HOM05D006075 ORTHO05D007527 3.0e-191 672.2 470 72.6
Psat4g067760 Pisum sativum HOM05D006075 ORTHO05D007527 4.3e-190 668.3 466 71.2
Manes.01G066100 Manihot esculenta HOM05D006075 ORTHO05D007527 2.1e-189 666.0 463 73.0
Nn6g34229 Nelumbo nucifera HOM05D006075 ORTHO05D007527 2.8e-189 665.6 456 72.4
Thecc.02G127300 Theobroma cacao HOM05D006075 ORTHO05D007527 2.8e-189 665.6 463 74.1
TPR.G23260 Trifolium pratense HOM05D006075 ORTHO05D007527 2.4e-188 662.5 462 71.4
Gohir.A01G010200 Gossypium hirsutum HOM05D006075 ORTHO05D007527 3.1e-188 662.1 463 74.1
Psat1g082240 Pisum sativum HOM05D006075 ORTHO05D007527 6.8e-188 661.0 466 70.8
Gorai.002G011900 Gossypium raimondii HOM05D006075 ORTHO05D007527 8.9e-188 660.6 463 74.1
Oeu011664.1 Olea europaea HOM05D006075 ORTHO05D007527 1.2e-187 660.2 455 73.0
Sabra01G0082500 Salix brachista HOM05D006075 ORTHO05D007527 3.4e-187 658.7 505 67.7
Lalb_Chr16g0389751 Lupinus albus HOM05D006075 ORTHO05D007527 7.6e-187 657.5 459 71.9
Gohir.D01G009800 Gossypium hirsutum HOM05D006075 ORTHO05D007527 2.9e-186 655.6 467 73.0
Lalb_Chr09g0333281 Lupinus albus HOM05D006075 ORTHO05D007527 2.9e-186 655.6 458 71.0
CAN.G981.23 Capsicum annuum HOM05D006075 ORTHO05D007527 5.4e-185 651.4 454 72.7
Sopen08g028750 Solanum pennellii HOM05D006075 ORTHO05D007527 4.6e-184 648.3 452 72.6
PSO478G2556 Papaver somniferum HOM05D006075 ORTHO05D007527 6.0e-184 647.9 473 69.3
Solyc08g080420.4 Solanum lycopersicum HOM05D006075 ORTHO05D007527 6.0e-184 647.9 452 72.3
arahy.Tifrunner.gnm1.ann1.M2EVQD Arachis hypogaea HOM05D006075 ORTHO05D007527 8.7e-183 644.0 466 68.5
Cc08_g14070 Coffea canephora HOM05D006075 ORTHO05D007527 8.1e-181 637.5 450 72.0
MSTRG.13821 Avicennia marina HOM05D006075 ORTHO05D007527 1.8e-180 636.3 453 70.6
Lj2A193G48 Lonicera japonica HOM05D006075 ORTHO05D007527 1.8e-180 636.3 435 73.8
PSO782G2103 Papaver somniferum HOM05D006075 ORTHO05D007527 3.1e-180 635.6 473 68.3
THA.LOC104818186 Tarenaya hassleriana HOM05D006075 ORTHO05D007527 2.0e-179 632.9 467 69.2
FvH4_5g01570 Fragaria vesca HOM05D006075 ORTHO05D007527 5.8e-179 631.3 416 76.2
Sed0007766 Sechium edule HOM05D006075 ORTHO05D007527 9.9e-179 630.6 459 69.3
Sp2g01480 Schrenkiella parvula HOM05D006075 ORTHO05D007527 1.7e-178 629.8 462 69.9
Carub.0002s0185 Capsella rubella HOM05D006075 ORTHO05D007527 2.2e-178 629.4 450 70.4
Thhalv10023435m.g Eutrema salsugineum HOM05D006075 ORTHO05D007527 8.4e-178 627.5 450 70.7
Migut.E01290 Erythranthe guttata HOM05D006075 ORTHO05D007527 1.1e-177 627.1 451 69.8
AL2G12410 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 1.9e-177 626.3 462 69.0
AT1G63110 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 2.4e-177 625.9 462 68.8
MELO3C005634.2 Cucumis melo HOM05D006075 ORTHO05D007527 3.2e-177 625.5 455 68.4
ECA240G3011 Erigeron canadensis HOM05D006075 ORTHO05D007527 7.8e-176 620.9 454 70.3
HanXRQChr03g0085661 Helianthus annuus HOM05D006075 ORTHO05D007527 1.7e-175 619.8 451 71.0
BcaC04g22472 Brassica carinata HOM05D006075 ORTHO05D007527 3.9e-175 618.6 462 68.6
arahy.Tifrunner.gnm1.ann1.S8HR28 Arachis hypogaea HOM05D006075 ORTHO05D007527 5.1e-175 618.2 468 67.1
BcaB07g31383 Brassica carinata HOM05D006075 ORTHO05D007527 5.1e-175 618.2 457 69.1
CsaV3_5G003210 Cucumis sativus L. HOM05D006075 ORTHO05D007527 1.5e-174 616.7 459 67.3
A09p15680 Brassica napus HOM05D006075 ORTHO05D007527 2.5e-174 615.9 464 69.4
BraA09t37209Z Brassica rapa HOM05D006075 ORTHO05D007527 2.5e-174 615.9 464 69.4
VMungo1215G1399 Vigna mungo HOM05D006075 ORTHO05D007527 3.3e-174 615.5 423 74.5
Aa31LG2G590 Aethionema arabicum HOM05D006075 ORTHO05D007527 4.3e-174 615.1 486 66.3
C09p18910 Brassica napus HOM05D006075 ORTHO05D007527 4.8e-173 611.7 464 68.3
PGR042G3166 Punica granatum HOM05D006075 ORTHO05D007527 2.6e-171 605.9 463 67.2
Actinidia05225 Actinidia chinensis HOM05D006075 ORTHO05D007527 1.2e-168 597.0 455 68.4
BolC9t54793H Brassica oleracea HOM05D006075 ORTHO05D007527 6.7e-167 591.3 467 67.0
Os02g0688900 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 2.8e-165 585.9 457 63.7
AT1G12730 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 2.4e-164 582.8 455 65.1
Peaxi162Scf00714g00528 Petunia axillaris HOM05D006075 ORTHO05D007527 2.5e-161 572.8 518 60.6
HPP92_001310 Vanilla planifolia HOM05D006075 ORTHO05D007527 2.5e-161 572.8 454 63.7
SGA_v2.0_scaffold385G50455 Striga asiatica HOM05D006075 ORTHO05D007527 1.2e-160 570.5 461 64.4
SalBow1G6580 Salvia bowleyana HOM05D006075 ORTHO05D007527 1.6e-160 570.1 558 56.1
EL10Ac5g12736 Beta vulgaris HOM05D006075 ORTHO05D007527 4.6e-160 568.5 439 67.4
FAN13G2280 Fragaria x ananassa HOM05D006075 ORTHO05D007527 3.9e-159 565.5 387 74.9
Lsat_1_v5_gn_6_87521 Lactuca sativa HOM05D006075 ORTHO05D007527 1.9e-158 563.1 437 66.8
CDE11G0531 Ceratophyllum demersum HOM05D006075 ORTHO05D007527 1.1e-156 557.4 457 63.0
Carub.0001s1243 Capsella rubella HOM05D006075 ORTHO05D007527 6.9e-156 554.7 452 63.3
FAN08G0114 Fragaria x ananassa HOM05D006075 ORTHO05D007527 5.8e-155 551.6 404 71.0
SEGI_27555 Sequoiadendron giganteum HOM05D006075 ORTHO05D007527 7.1e-153 544.7 458 59.2
vmacro13924 Vaccinium macrocarpon HOM05D006075 ORTHO05D007527 1.6e-152 543.5 459 63.6
TAR629G3145 Trochodendron aralioides HOM05D006075 ORTHO05D007527 8.5e-146 521.2 368 70.9
ClCG01G003090 Citrullus lanatus HOM05D006075 ORTHO05D007527 2.1e-144 516.5 463 59.8
AL1G24320 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 1.7e-141 506.9 453 60.3
COL.COLO4_32412 Corchorus olitorius HOM05D006075 ORTHO05D007527 2.4e-140 503.1 483 60.0
Manes.02G026900 Manihot esculenta HOM05D006075 ORTHO05D007527 1.2e-139 500.7 514 55.8
HanXRQChr11g0323321 Helianthus annuus HOM05D006075 ORTHO05D007527 1.5e-139 500.4 452 60.8
Nitab4.5_0002853g0070 Nicotiana tabacum HOM05D006075 ORTHO05D007527 3.8e-138 495.7 494 56.5
TAR629G0535 Trochodendron aralioides HOM05D006075 ORTHO05D007527 8.5e-138 494.6 343 73.8
Duzib052G1148 Durio zibethinus HOM05D006075 ORTHO05D007527 1.4e-135 487.3 463 59.0
Nitab4.5_0016932g0010 Nicotiana tabacum HOM05D006075 ORTHO05D007527 1.3e-133 480.7 458 57.9
unitig_744.g24646 Utricularia gibba HOM05D006075 ORTHO05D007527 3.1e-132 476.1 458 57.2
PSO478G1113 Papaver somniferum HOM05D006075 ORTHO05D007527 2.0e-131 473.4 324 73.8
Sc01g0008740 Simmondsia chinensis HOM05D006075 ORTHO05D007527 5.2e-127 458.8 358 65.9
Glyma.05G049100 Glycine max HOM05D006075 ORTHO05D007527 6.5e-122 441.8 326 71.2
PGSC0003DMG400003033 Solanum tuberosum HOM05D006075 ORTHO05D007527 5.5e-121 438.7 431 56.1
ATR0322G053 Amborella trichopoda HOM05D006075 ORTHO05D007527 1.8e-119 433.7 321 67.3
CARHR013020 Cardamine hirsuta HOM05D006075 ORTHO05D007527 2.0e-118 430.3 363 60.1
Haze_08940 Corylus avellana HOM05D006075 ORTHO05D007527 2.0e-115 420.2 282 75.9
Pp3c9_23740 Physcomitrium patens HOM05D006075 ORTHO05D007527 4.2e-113 412.5 468 48.3
Mapoly0001s0316 Marchantia polymorpha HOM05D006075 ORTHO05D007527 7.5e-110 401.7 467 46.0
Ah.12g057560 Amaranthus hybridus HOM05D006075 ORTHO05D007527 6.3e-109 398.7 434 54.4
SMO270G0127 Selaginella moellendorffii HOM05D006075 ORTHO05D007527 3.3e-105 386.3 488 44.9
CARHR048400 Cardamine hirsuta HOM05D006075 ORTHO05D007527 4.2e-105 386.0 305 64.3
Hund14727 Selenicereus undatus HOM05D006075 ORTHO05D007527 1.2e-99 367.9 465 48.6
Sed0016840 Sechium edule HOM05D006075 ORTHO05D007527 2.0e-99 367.1 271 68.3
Zm00001eb251050 Zea mays HOM05D006075 ORTHO05D007527 9.5e-89 331.6 307 55.4
Cpa.g.sc74.79 Carica papaya HOM05D006075 ORTHO05D007527 2.4e-84 317.0 291 57.4
Dinv39003 Davidia involucrata HOM05D006075 ORTHO05D007527 9.2e-76 288.5 288 55.6
AagrBONN_evm.TU.Sc2ySwM_117.1004 Anthoceros agrestis HOM05D006075 ORTHO05D007527 1.5e-73 281.2 364 44.5
Os01g0870201 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 1.3e-69 268.1 461 37.7
CSS0009197 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 4.9e-69 266.2 419 42.2
CBR_g17923 Chara braunii HOM05D006075 ORTHO05D007527 1.5e-65 254.6 759 27.1
Ca_20251_v3 Cicer arietinum L. HOM05D006075 ORTHO05D007527 6.2e-56 222.6 154 70.1
AUR62017286 Chenopodium quinoa HOM05D006075 ORTHO05D007527 2.9e-45 187.2 176 60.2
TAR636G1294 Trochodendron aralioides HOM05D006075 ORTHO05D007527 2.1e-43 181.0 149 63.8
AUR62010644 Chenopodium quinoa HOM05D006075 ORTHO05D007527 7.9e-35 152.5 176 50.6
MCO15G123 Micromonas commoda HOM05D006075 ORTHO05D007527 1.8e-34 151.4 460 28.5
C09p15950 Brassica napus HOM05D006075 ORTHO05D007527 1.2e-30 138.7 100 71.0
PRCOL_00005762 Prasinoderma coloniale HOM05D006075 ORTHO05D007527 3.4e-30 137.1 514 25.5
TAR636G2798 Trochodendron aralioides HOM05D006075 ORTHO05D007527 7.7e-30 136.0 67 95.5
ATR0322G060 Amborella trichopoda HOM05D006075 ORTHO05D007527 2.3e-26 124.4 86 69.8
Eucgr.H02816 Eucalyptus grandis HOM05D005128 ORTHO05D006227 1.1e-25 122.1 76 71.1
BolC9t54506H Brassica oleracea HOM05D006075 ORTHO05D007527 9.7e-25 119.0 117 59.0
Cre03.g150400 Chlamydomonas reinhardtii HOM05D006075 ORTHO05D007527 4.1e-15 87.0 206 34.0
Actinidia27405 Actinidia chinensis HOM05D006075 ORTHO05D007527 2.2e-13 81.3 63 65.1
Pp3c15_22645 Physcomitrium patens HOM05D006075 ORTHO05D007527 1.8e-10 71.6 127 38.6
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 4.4e-09 67.0 70 51.4


User provided reference genes

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