Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G0383 Cannabis sativa HOM05D003520 ORTHO05D003332 6.0e-309 1063.5 614 100.0
Cfa008307 Carpinus fangiana HOM05D003520 ORTHO05D003332 1.3e-40 172.2 685 29.2
Glyma.16G194400 Glycine max HOM05D003520 ORTHO05D003332 5.3e-39 166.8 646 30.7
VMungo0464G1159 Vigna mungo HOM05D003520 ORTHO05D003332 2.2e-37 161.4 658 27.5
Gorai.008G278300 Gossypium raimondii HOM05D003520 ORTHO05D003332 2.9e-37 161.0 640 28.4
CiPaw.03G105100 Carya illinoinensis HOM05D003520 ORTHO05D003332 1.2e-35 155.6 612 29.4
Phvul.004G117900 Phaseolus vulgaris HOM05D003520 ORTHO05D003332 1.8e-34 151.8 631 27.6
MD01G1199300 Malus domestica HOM05D003520 ORTHO05D003332 1.5e-33 148.7 734 26.7
Gohir.A12G258600 Gossypium hirsutum HOM05D003520 ORTHO05D003332 3.3e-33 147.5 627 28.9
MD07G1267200 Malus domestica HOM05D003520 ORTHO05D003332 7.4e-33 146.4 706 27.3
Gohir.D12G259800 Gossypium hirsutum HOM05D003520 ORTHO05D003332 8.2e-32 142.9 629 27.8
Potri.012G138300 Populus trichocarpa HOM05D003520 ORTHO05D003332 8.2e-32 142.9 785 24.6
Ciclev10004647m.g Citrus clementina HOM05D003520 ORTHO05D003332 3.1e-31 141.0 601 28.1
Prupe.2G292800 Prunus persica HOM05D003520 ORTHO05D003332 5.3e-31 140.2 550 28.5
Duzib205G1602 Durio zibethinus HOM05D003520 ORTHO05D003332 1.2e-30 139.0 637 31.6
arahy.Tifrunner.gnm1.ann1.D6ZH50 Arachis hypogaea HOM05D003520 ORTHO05D003332 5.9e-30 136.7 595 27.1
Haze_13728 Corylus avellana HOM05D003520 ORTHO05D003332 7.7e-30 136.3 554 29.8
Thecc.03G174900 Theobroma cacao HOM05D003520 ORTHO05D003332 5.5e-28 130.2 647 26.6
TWI14G1277 Tripterygium wilfordii HOM05D003520 ORTHO05D003332 5.5e-28 130.2 661 30.1
CsaV3_3G017000 Cucumis sativus L. HOM05D003520 ORTHO05D003332 4.7e-27 127.1 643 25.3
Potri.015G140100 Populus trichocarpa HOM05D003520 ORTHO05D003332 1.4e-26 125.6 816 25.1
Sed0005114 Sechium edule HOM05D003520 ORTHO05D003332 1.5e-25 122.1 617 26.7
Sabra12G0103700 Salix brachista HOM05D003520 ORTHO05D003332 5.7e-25 120.2 429 29.1
Glyma.09G140500 Glycine max HOM05D003520 ORTHO05D003332 7.4e-25 119.8 542 26.4
COL.COLO4_14291 Corchorus olitorius HOM05D003520 ORTHO05D003332 4.8e-24 117.1 751 24.5
arahy.Tifrunner.gnm1.ann1.SM3UTK Arachis hypogaea HOM05D003520 ORTHO05D003332 1.8e-23 115.2 620 25.3
ClCG05G007960 Citrullus lanatus HOM05D003520 ORTHO05D003332 2.0e-22 111.7 653 25.4
Atru.chr1.477_Atru.chr1.478 Acer truncatum HOM05D003520 ORTHO05D003332 7.7e-22 109.8 606 27.9
Manes.14G027150 Manihot esculenta HOM05D003520 ORTHO05D003332 5.0e-21 107.1 211 38.4
Manes.14G027100 Manihot esculenta HOM05D003520 ORTHO05D003332 3.2e-20 104.4 331 32.3
Eucgr.K00243 Eucalyptus grandis HOM05D003520 ORTHO05D003332 4.2e-20 104.0 637 25.0
QL09p014562 Quercus lobata HOM05D003520 ORTHO05D003332 1.6e-19 102.1 695 24.9
Sabra15G0150800 Salix brachista HOM05D003520 ORTHO05D003332 2.7e-19 101.3 844 23.2
Lalb_Chr19g0130921 Lupinus albus HOM05D003520 ORTHO05D003332 3.0e-18 97.8 426 28.2
GSVIVG01010547001 Vitis vinifera HOM05D003520 ORTHO05D003332 7.5e-17 93.2 344 30.2
Lalb_Chr01g0009251 Lupinus albus HOM05D003520 ORTHO05D003332 9.1e-15 86.3 254 31.5
FAN03G2536 Fragaria x ananassa HOM05D016299 ORTHO05D003332 1.2e-14 85.9 446 27.1
PGR142G4230 Punica granatum HOM05D003520 ORTHO05D003332 2.7e-14 84.7 200 32.5
FAN03G3032 Fragaria x ananassa HOM05D016299 ORTHO05D003332 3.5e-14 84.3 446 26.7
RcHm_v2.0_Chr1g0377031 Rosa chinensis HOM05D016299 ORTHO05D003332 5.9e-14 83.6 441 25.4
Cpa.g.sc107.38 Carica papaya HOM05D003520 ORTHO05D003332 1.3e-13 82.4 289 28.7
FAN01G0032 Fragaria x ananassa HOM05D016299 ORTHO05D003332 1.7e-13 82.0 443 25.7
TAR629G1002 Trochodendron aralioides HOM05D003520 ORTHO05D003332 1.7e-13 82.0 323 30.0
MELO3C006898.2 Cucumis melo HOM05D003520 ORTHO05D003332 5.0e-13 80.5 174 33.9
CiPaw.04G065200 Carya illinoinensis HOM05D003520 ORTHO05D003332 8.5e-13 79.7 162 36.4
FvH4_7g29290 Fragaria vesca HOM05D016299 ORTHO05D003332 1.1e-12 79.3 443 25.3
FAN10G1120 Fragaria x ananassa HOM05D016299 ORTHO05D003332 1.1e-12 79.3 443 25.3
FAN06G4500 Fragaria x ananassa HOM05D016299 ORTHO05D003332 1.9e-12 78.6 443 25.3
FAN06G4083 Fragaria x ananassa HOM05D016299 ORTHO05D003332 5.5e-12 77.0 443 25.1
Lj2g0020727 Lotus japonicus HOM05D003520 ORTHO05D003332 1.2e-11 75.9 636 31.3
Dinv28454 Davidia involucrata HOM05D003520 ORTHO05D003332 8.0e-11 73.2 473 24.1
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 6.8e-10 70.1 166 33.7
DCAR_020242 Daucus carota HOM05D003520 ORTHO05D003332 8.8e-10 69.7 286 28.7
TAR375G0279 Trochodendron aralioides HOM05D003520 ORTHO05D003332 8.8e-10 69.7 498 24.9
Cc02_g03140 Coffea canephora HOM05D003520 ORTHO05D003332 1.2e-09 69.3 317 27.8
Actinidia32870 Actinidia chinensis HOM05D003520 ORTHO05D003332 2.0e-09 68.6 282 26.2
MELO3C005647.2 Cucumis melo HOM05D003520 ORTHO05D003332 1.3e-08 65.9 180 25.6
PSO478G3392 Papaver somniferum HOM05D003520 ORTHO05D003332 1.7e-08 65.5 175 29.7
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 2.2e-08 65.1 644 22.4
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 2.2e-08 65.1 644 22.4
vmacro06696 Vaccinium macrocarpon HOM05D003520 ORTHO05D003332 4.8e-08 63.9 283 26.9
Migut.F00353 Erythranthe guttata HOM05D003520 ORTHO05D003332 1.1e-07 62.8 117 37.6
Actinidia05219 Actinidia chinensis HOM05D003520 ORTHO05D003332 1.2e-06 59.3 576 22.2
Actinidia34100 Actinidia chinensis HOM05D003520 ORTHO05D003332 1.2e-06 59.3 272 25.0
MSTRG.8747 Avicennia marina HOM05D003520 ORTHO05D003332 1.2e-06 59.3 659 22.9
Nn1g01417 Nelumbo nucifera HOM05D003520 ORTHO05D003332 1.2e-06 59.3 93 39.8
PSO782G5503 Papaver somniferum HOM05D003520 ORTHO05D003332 1.2e-06 59.3 175 27.4
CAN.G1704.2 Capsicum annuum HOM05D012625 ORTHO05D003332 1.6e-06 58.9 124 35.5
Oeu024236.1 Olea europaea HOM05D012625 ORTHO05D003332 1.6e-06 58.9 128 29.7
MBI18_g01149_MAGBIO Magnolia biondii HOM05D003520 ORTHO05D003332 2.0e-06 58.5 48 60.4
Ca_25739_v3 Cicer arietinum L. HOM05D003520 ORTHO05D003332 7.7e-06 56.6 215 27.0


User provided reference genes

Program Settings