Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G0373 Cannabis sativa HOM05D006369 ORTHO05D007764 1.1e-126 456.8 258 100.0
FvH4_7g33790 Fragaria vesca HOM05D006369 ORTHO05D007764 8.7e-68 261.2 222 67.6
FAN01G2653 Fragaria x ananassa HOM05D006369 ORTHO05D007764 5.6e-67 258.5 222 67.1
FAN03G1142 Fragaria x ananassa HOM05D006369 ORTHO05D007764 7.3e-67 258.1 222 66.7
FAN03G2967 Fragaria x ananassa HOM05D006369 ORTHO05D007764 7.3e-67 258.1 222 66.7
RcHm_v2.0_Chr1g0383921 Rosa chinensis HOM05D006369 ORTHO05D007764 9.6e-67 257.7 222 65.8
FAN10G1961 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.3e-66 257.3 222 66.7
FAN10G2535 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.3e-66 257.3 222 66.7
CiPaw.05G237500 Carya illinoinensis HOM05D006369 ORTHO05D007764 3.1e-65 252.7 224 64.7
Prupe.2G324400 Prunus persica HOM05D006369 ORTHO05D007764 1.2e-64 250.8 223 64.1
Ciclev10021854m.g Citrus clementina HOM05D006369 ORTHO05D007764 4.5e-64 248.8 212 67.9
Dinv29169 Davidia involucrata HOM05D006369 ORTHO05D007764 9.9e-64 247.7 219 64.4
MD07G1306400 Malus domestica HOM05D006369 ORTHO05D007764 1.2e-61 240.7 208 66.3
Manes.08G163800 Manihot esculenta HOM05D006369 ORTHO05D007764 1.6e-61 240.4 219 65.3
CiPaw.06G019700 Carya illinoinensis HOM05D006369 ORTHO05D007764 1.0e-60 237.7 200 67.5
Potri.019G052400 Populus trichocarpa HOM05D006369 ORTHO05D007764 3.0e-60 236.1 220 64.5
MD01G1234200 Malus domestica HOM05D006369 ORTHO05D007764 3.9e-60 235.7 203 67.5
Cfa015892 Carpinus fangiana HOM05D006369 ORTHO05D007764 6.7e-60 235.0 221 64.7
Thecc.03G000800 Theobroma cacao HOM05D006369 ORTHO05D007764 1.5e-59 233.8 211 61.1
TAR365G0740 Trochodendron aralioides HOM05D006369 ORTHO05D007764 1.5e-59 233.8 219 61.6
Atru.chr7.1119 Acer truncatum HOM05D006369 ORTHO05D007764 3.3e-59 232.6 222 63.1
ClCG10G009050 Citrullus lanatus HOM05D006369 ORTHO05D007764 6.2e-58 228.4 203 63.1
MELO3C024871.2 Cucumis melo HOM05D006369 ORTHO05D007764 6.2e-58 228.4 218 61.9
Actinidia00694 Actinidia chinensis HOM05D006369 ORTHO05D007764 6.9e-57 224.9 215 61.9
Duzib211G0044 Durio zibethinus HOM05D006369 ORTHO05D007764 1.2e-56 224.2 223 61.0
Gohir.A07G176900 Gossypium hirsutum HOM05D006369 ORTHO05D007764 1.2e-56 224.2 219 61.6
Gohir.D07G184401 Gossypium hirsutum HOM05D006369 ORTHO05D007764 1.2e-56 224.2 224 61.6
Gorai.001G204600 Gossypium raimondii HOM05D006369 ORTHO05D007764 2.6e-56 223.0 224 61.6
Cc02_g00390 Coffea canephora HOM05D006369 ORTHO05D007764 3.4e-56 222.6 220 57.7
Lj1A1033G61 Lonicera japonica HOM05D006369 ORTHO05D007764 3.4e-56 222.6 221 60.6
CsaV3_4G008720 Cucumis sativus L. HOM05D006369 ORTHO05D007764 7.6e-56 221.5 218 59.6
CSS0035893 Camellia sinensis var. sinensis HOM05D006369 ORTHO05D007764 1.3e-55 220.7 229 58.1
Lalb_Chr19g0139881 Lupinus albus HOM05D006369 ORTHO05D007764 4.9e-55 218.8 213 61.5
VMungo1127G0993 Vigna mungo HOM05D006369 ORTHO05D007764 2.5e-54 216.5 216 61.1
Phvul.011G021200 Phaseolus vulgaris HOM05D006369 ORTHO05D007764 5.5e-54 215.3 214 61.2
THA.LOC104820876 Tarenaya hassleriana HOM05D006369 ORTHO05D007764 9.3e-54 214.5 222 58.6
Glyma.12G018800 Glycine max HOM05D006369 ORTHO05D007764 2.7e-53 213.0 215 61.4
MSTRG.8579 Avicennia marina HOM05D006369 ORTHO05D007764 1.0e-52 211.1 218 55.0
CARHR196110 Cardamine hirsuta HOM05D006369 ORTHO05D007764 3.0e-52 209.5 229 54.6
GSVIVG01024423001 Vitis vinifera HOM05D006369 ORTHO05D007764 3.9e-52 209.1 192 63.0
Glyma.11G092500 Glycine max HOM05D006369 ORTHO05D007764 6.7e-52 208.4 216 59.7
Nitab4.5_0000820g0010 Nicotiana tabacum HOM05D006369 ORTHO05D007764 6.7e-52 208.4 206 56.8
Psat7g171520 Pisum sativum HOM05D006369 ORTHO05D007764 8.7e-52 208.0 219 55.3
Carub.0006s1525 Capsella rubella HOM05D006369 ORTHO05D007764 1.5e-51 207.2 225 55.6
Sed0025457 Sechium edule HOM05D006369 ORTHO05D007764 1.9e-51 206.8 206 61.7
C02p08760 Brassica napus HOM05D006369 ORTHO05D007764 2.5e-51 206.5 215 55.8
Migut.F00102 Erythranthe guttata HOM05D006369 ORTHO05D007764 3.3e-51 206.1 218 56.0
BcaNung00427 Brassica carinata HOM05D006369 ORTHO05D007764 9.6e-51 204.5 237 55.3
Nn3g21321 Nelumbo nucifera HOM05D006369 ORTHO05D007764 9.6e-51 204.5 230 55.7
BcaC03g18532 Brassica carinata HOM05D006369 ORTHO05D007764 1.3e-50 204.1 215 55.3
BolC2t06790H Brassica oleracea HOM05D006369 ORTHO05D007764 1.3e-50 204.1 215 55.3
Sp6g27090 Schrenkiella parvula HOM05D006369 ORTHO05D007764 1.3e-50 204.1 222 55.9
A02p03940 Brassica napus HOM05D006369 ORTHO05D007764 1.6e-50 203.8 201 57.2
vmacro02505 Vaccinium macrocarpon HOM05D006369 ORTHO05D007764 1.6e-50 203.8 254 52.0
BraA02t05358Z Brassica rapa HOM05D006369 ORTHO05D007764 4.8e-50 202.2 217 55.3
Haze_00598 Corylus avellana HOM05D006369 ORTHO05D007764 8.2e-50 201.4 185 67.6
Ah.08g212670 Amaranthus hybridus HOM05D006369 ORTHO05D007764 1.1e-49 201.1 206 57.3
Ca_04928_v3 Cicer arietinum L. HOM05D006369 ORTHO05D007764 1.8e-49 200.3 218 56.0
Nitab4.5_0000001g0150 Nicotiana tabacum HOM05D006369 ORTHO05D007764 1.8e-49 200.3 206 55.8
SGA_v2.0_scaffold18G08505 Striga asiatica HOM05D006369 ORTHO05D007764 1.8e-49 200.3 224 53.1
arahy.Tifrunner.gnm1.ann1.WFP97B Arachis hypogaea HOM05D006369 ORTHO05D007764 3.1e-49 199.5 247 50.6
Hund18049 Selenicereus undatus HOM05D006369 ORTHO05D007764 3.1e-49 199.5 220 53.2
AL6G28090 Arabidopsis lyrata HOM05D006369 ORTHO05D007764 4.1e-49 199.1 199 58.3
Thhalv10014449m.g Eutrema salsugineum HOM05D006369 ORTHO05D007764 5.3e-49 198.7 222 55.0
Solyc03g062680.3 Solanum lycopersicum HOM05D006369 ORTHO05D007764 9.0e-49 198.0 207 55.1
Aqoxy2G03109 Aquilegia oxysepala HOM05D006369 ORTHO05D007764 1.2e-48 197.6 221 54.8
AT5G17070 Arabidopsis thaliana HOM05D006369 ORTHO05D007764 1.2e-48 197.6 222 54.5
Sopen03g015000 Solanum pennellii HOM05D006369 ORTHO05D007764 4.5e-48 195.7 207 54.6
Eucgr.A02962 Eucalyptus grandis HOM05D006369 ORTHO05D007764 1.7e-47 193.7 206 54.9
CAN.G317.12 Capsicum annuum HOM05D006369 ORTHO05D007764 2.2e-47 193.4 210 54.3
Lj3g0017971 Lotus japonicus HOM05D006369 ORTHO05D007764 2.2e-47 193.4 234 55.1
PGR042G2784 Punica granatum HOM05D006369 ORTHO05D007764 3.8e-47 192.6 205 56.1
Medtr4g077610 Medicago truncatula HOM05D006369 ORTHO05D007764 6.5e-47 191.8 192 59.4
SalBow4G3280 Salvia bowleyana HOM05D006369 ORTHO05D007764 1.4e-46 190.7 222 48.6
arahy.Tifrunner.gnm1.ann1.F9R2PF Arachis hypogaea HOM05D006369 ORTHO05D007764 1.9e-46 190.3 262 47.7
EL10Ac7g17391 Beta vulgaris HOM05D006369 ORTHO05D007764 1.9e-46 190.3 225 52.0
BcaB01g04960 Brassica carinata HOM05D006369 ORTHO05D007764 1.9e-46 190.3 218 54.1
Lsat_1_v5_gn_3_37940 Lactuca sativa HOM05D006369 ORTHO05D007764 1.9e-46 190.3 213 56.3
HanXRQChr17g0541681 Helianthus annuus HOM05D006369 ORTHO05D007764 1.2e-45 187.6 224 54.5
Aa31LG11G12610 Aethionema arabicum HOM05D006369 ORTHO05D007764 2.7e-45 186.4 218 55.0
TPR.G39567 Trifolium pratense HOM05D006369 ORTHO05D007764 5.1e-44 182.2 224 52.2
MBI06_g08525_MAGBIO Magnolia biondii HOM05D006369 ORTHO05D007764 1.1e-43 181.0 201 56.7
Peaxi162Scf00076g00928 Petunia axillaris HOM05D006369 ORTHO05D007764 1.6e-42 177.2 284 40.5
Psat1g047200 Pisum sativum HOM05D006369 ORTHO05D007764 1.6e-42 177.2 151 60.9
Oeu005324.1 Olea europaea HOM05D006369 ORTHO05D007764 2.8e-42 176.4 172 58.1
ECA246G2850 Erigeron canadensis HOM05D006369 ORTHO05D007764 1.8e-41 173.7 217 48.8
Psat1g047280 Pisum sativum HOM05D006369 ORTHO05D007764 6.9e-41 171.8 140 64.3
Sc05g0004440 Simmondsia chinensis HOM05D006369 ORTHO05D007764 4.5e-40 169.1 186 55.4
PSO170G0520 Papaver somniferum HOM05D006369 ORTHO05D007764 2.2e-39 166.8 214 50.9
PSO210G6912 Papaver somniferum HOM05D006369 ORTHO05D007764 5.0e-39 165.6 215 51.2
HPP92_026820 Vanilla planifolia HOM05D006369 ORTHO05D007764 5.0e-39 165.6 200 49.5
Rhsim13G0016700 Rhododendron simsii HOM05D006369 ORTHO05D007764 6.5e-39 165.2 272 43.4
Psat1g047240 Pisum sativum HOM05D006369 ORTHO05D007764 3.2e-38 162.9 128 66.4
DCAR_020401 Daucus carota HOM05D006369 ORTHO05D007764 1.2e-37 161.0 224 49.1
CDE02G3455 Ceratophyllum demersum HOM05D006369 ORTHO05D007764 3.3e-35 152.9 193 48.7
SEGI_01011 Sequoiadendron giganteum HOM05D006369 ORTHO05D007764 3.7e-34 149.4 133 60.2
Os06g0300700 Oryza sativa ssp. japonica HOM05D006369 ORTHO05D007764 1.5e-32 144.1 236 41.9
Zm00001eb381130 Zea mays HOM05D006369 ORTHO05D007764 7.7e-32 141.7 198 44.9
unitig_747.g21708 Utricularia gibba HOM05D006369 ORTHO05D007764 1.3e-31 141.0 236 41.9
BraA03t10137Z Brassica rapa HOM05D006369 ORTHO05D007764 2.1e-29 133.7 175 49.1
ATR0213G006 Amborella trichopoda HOM05D006369 ORTHO05D007764 1.1e-27 127.9 180 47.2
AagrBONN_evm.TU.Sc2ySwM_344.1770 Anthoceros agrestis HOM05D006369 ORTHO05D007764 1.7e-23 114.0 176 43.8
COL.COLO4_13442 Corchorus olitorius HOM05D006369 ORTHO05D007764 4.2e-22 109.4 197 44.2
Pp3c20_5600 Physcomitrium patens HOM05D006369 ORTHO05D007764 5.5e-22 109.0 219 37.0
CBR_g17900 Chara braunii HOM05D006369 ORTHO05D007764 3.6e-21 106.3 133 46.6
Mapoly0084s0069 Marchantia polymorpha HOM05D006369 ORTHO05D007764 3.6e-21 106.3 208 41.3
Dinv06133 Davidia involucrata HOM05D006369 ORTHO05D007764 2.2e-18 97.1 82 63.4
Hma1.2p1_1235F.1_g269100 Hydrangea macrophylla HOM05D006369 ORTHO05D007764 4.8e-18 95.9 147 49.7
C03p09390 Brassica napus HOM05D006369 ORTHO05D007764 2.2e-15 87.0 124 50.0
Cpa.g.sc39.77 Carica papaya HOM05D006369 ORTHO05D007764 2.9e-15 86.7 50 80.0
RcHm_v2.0_Chr5g0041771 Rosa chinensis HOM05D006369 ORTHO05D007764 2.9e-15 86.7 66 63.6
BcaB01g05232 Brassica carinata HOM05D006369 ORTHO05D007764 1.1e-14 84.7 124 49.2
SMO141G0301 Selaginella moellendorffii HOM05D006369 ORTHO05D007764 5.5e-14 82.4 156 38.5
BolC3t13440H Brassica oleracea HOM05D006369 ORTHO05D007764 4.7e-13 79.3 117 50.4
Lsat_1_v5_gn_5_27580 Lactuca sativa HOM05D005974 ORTHO05D007201 5.2e-12 75.9 83 51.8
Sabra19G0056200 Salix brachista HOM05D006369 ORTHO05D007764 2.0e-11 73.9 44 81.8
Sabra19G0056300 Salix brachista HOM05D006369 ORTHO05D007764 3.4e-11 73.2 101 55.4
Cre10.g463700 Chlamydomonas reinhardtii HOM05D006369 ORTHO05D007764 5.4e-09 65.9 122 37.7
Sabra19G0056100 Salix brachista HOM05D006369 ORTHO05D007764 2.0e-08 63.9 51 60.8
PGSC0003DMG401008641 Solanum tuberosum HOM05D006369 ORTHO05D007764 1.5e-06 57.8 99 44.4
PGSC0003DMG402008641 Solanum tuberosum HOM05D006369 ORTHO05D007764 7.2e-06 55.5 52 48.1


User provided reference genes

Program Settings