Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G0369 Cannabis sativa HOM05D006567 ORTHO05D009430 1.0e-215 753.1 371 100.0
QL12p011664 Quercus lobata HOM05D006567 ORTHO05D009430 3.5e-187 658.3 368 86.4
Lj4g0021343 Lotus japonicus HOM05D006567 ORTHO05D009430 9.6e-185 650.2 366 85.8
TPR.G37608 Trifolium pratense HOM05D006567 ORTHO05D009430 1.6e-184 649.4 367 85.6
Glyma.05G061300 Glycine max HOM05D006567 ORTHO05D009430 2.1e-184 649.0 366 84.7
Sabra03G0048700 Salix brachista HOM05D006567 ORTHO05D009430 2.1e-184 649.0 368 83.4
MD04G1062400 Malus domestica HOM05D006567 ORTHO05D009430 6.2e-184 647.5 368 85.1
RcHm_v2.0_Chr7g0203711 Rosa chinensis HOM05D006567 ORTHO05D009430 1.1e-183 646.7 366 85.2
Cfa015824 Carpinus fangiana HOM05D006567 ORTHO05D009430 2.4e-183 645.6 367 84.5
arahy.Tifrunner.gnm1.ann1.69E4XE Arachis hypogaea HOM05D006567 ORTHO05D009430 5.2e-183 644.4 364 84.3
arahy.Tifrunner.gnm1.ann1.E0WBQ7 Arachis hypogaea HOM05D006567 ORTHO05D009430 8.9e-183 643.7 364 84.1
Medtr4g100760 Medicago truncatula HOM05D006567 ORTHO05D009430 1.2e-182 643.3 366 84.7
Ca_21975_v3 Cicer arietinum L. HOM05D006567 ORTHO05D009430 1.5e-182 642.9 363 86.0
VMungo0251G1330 Vigna mungo HOM05D006567 ORTHO05D009430 2.0e-182 642.5 365 83.3
FAN04G2727 Fragaria x ananassa HOM05D006567 ORTHO05D009430 9.9e-182 640.2 367 83.9
vmacro00188 Vaccinium macrocarpon HOM05D006567 ORTHO05D009430 1.3e-181 639.8 371 81.7
FAN18G0654 Fragaria x ananassa HOM05D006567 ORTHO05D009430 1.7e-181 639.4 367 83.4
Psat4g072680 Pisum sativum HOM05D006567 ORTHO05D009430 1.7e-181 639.4 364 84.6
FAN08G1209 Fragaria x ananassa HOM05D006567 ORTHO05D009430 2.2e-181 639.0 367 83.7
Potri.003G078500 Populus trichocarpa HOM05D006567 ORTHO05D009430 2.2e-181 639.0 364 83.2
SalBow6G6157 Salvia bowleyana HOM05D006567 ORTHO05D009430 2.9e-181 638.6 365 82.7
TWI81G0123 Tripterygium wilfordii HOM05D006567 ORTHO05D009430 2.9e-181 638.6 366 83.6
PGR031G0713 Punica granatum HOM05D006567 ORTHO05D009430 8.4e-181 637.1 364 83.0
Atru.chr9.1289 Acer truncatum HOM05D006567 ORTHO05D009430 1.4e-180 636.3 362 84.3
COL.COLO4_37145 Corchorus olitorius HOM05D006567 ORTHO05D009430 1.4e-180 636.3 362 83.4
CSS0024870 Camellia sinensis var. sinensis HOM05D006567 ORTHO05D009430 7.1e-180 634.0 366 83.1
Duzib084G0744 Durio zibethinus HOM05D006567 ORTHO05D009430 7.1e-180 634.0 371 81.9
Eucgr.D02095 Eucalyptus grandis HOM05D006567 ORTHO05D009430 7.1e-180 634.0 368 82.9
Lalb_Chr05g0221201 Lupinus albus HOM05D006567 ORTHO05D009430 7.1e-180 634.0 363 83.5
MSTRG.12113 Avicennia marina HOM05D006567 ORTHO05D009430 2.1e-179 632.5 365 82.2
Thecc.03G249000 Theobroma cacao HOM05D006567 ORTHO05D009430 6.0e-179 630.9 367 82.0
TAR636G1533 Trochodendron aralioides HOM05D006567 ORTHO05D009430 6.0e-179 630.9 365 82.5
Gohir.D12G218600 Gossypium hirsutum HOM05D006567 ORTHO05D009430 1.0e-178 630.2 368 81.8
Gorai.008G234200 Gossypium raimondii HOM05D006567 ORTHO05D009430 1.0e-178 630.2 368 82.1
Cc08_g12240 Coffea canephora HOM05D006567 ORTHO05D009430 1.3e-178 629.8 364 82.1
Actinidia14413 Actinidia chinensis HOM05D006567 ORTHO05D009430 3.9e-178 628.2 368 81.5
Peaxi162Scf00209g00122 Petunia axillaris HOM05D006567 ORTHO05D009430 5.1e-178 627.9 366 81.1
Phvul.003G221900 Phaseolus vulgaris HOM05D006567 ORTHO05D009430 8.7e-178 627.1 365 82.2
CsaV3_5G004320 Cucumis sativus L. HOM05D006567 ORTHO05D009430 1.1e-177 626.7 367 82.3
MELO3C005521.2 Cucumis melo HOM05D006567 ORTHO05D009430 3.3e-177 625.2 365 82.2
PGSC0003DMG400004822 Solanum tuberosum HOM05D006567 ORTHO05D009430 3.3e-177 625.2 366 80.6
Ciclev10020637m.g Citrus clementina HOM05D006567 ORTHO05D009430 4.3e-177 624.8 367 81.2
Aqoxy7G00822 Aquilegia oxysepala HOM05D006567 ORTHO05D009430 7.3e-177 624.0 363 81.8
Gohir.A12G216000 Gossypium hirsutum HOM05D006567 ORTHO05D009430 1.3e-176 623.2 374 80.5
Migut.A01121 Erythranthe guttata HOM05D006567 ORTHO05D009430 3.6e-176 621.7 367 81.5
MBI04_g09522_MAGBIO Magnolia biondii HOM05D006567 ORTHO05D009430 3.6e-176 621.7 369 80.2
Hund11604 Selenicereus undatus HOM05D006567 ORTHO05D009430 1.1e-175 620.2 366 79.2
Solyc08g078460.3 Solanum lycopersicum HOM05D006567 ORTHO05D009430 1.4e-175 619.8 366 79.8
Sopen08g026950 Solanum pennellii HOM05D006567 ORTHO05D009430 1.4e-175 619.8 366 79.8
Cpa.g.sc29.179 Carica papaya HOM05D006567 ORTHO05D009430 1.8e-175 619.4 367 80.4
Nn1g00949 Nelumbo nucifera HOM05D006567 ORTHO05D009430 2.4e-175 619.0 362 81.2
CAN.G1178.26 Capsicum annuum HOM05D006567 ORTHO05D009430 5.3e-175 617.8 366 79.8
ClCG01G004160 Citrullus lanatus HOM05D006567 ORTHO05D009430 7.6e-174 614.0 377 79.6
Haze_00669 Corylus avellana HOM05D006567 ORTHO05D009430 1.3e-173 613.2 398 76.9
DCAR_004966 Daucus carota HOM05D006567 ORTHO05D009430 8.4e-173 610.5 361 80.1
ECA240G4587 Erigeron canadensis HOM05D006567 ORTHO05D009430 1.9e-172 609.4 361 78.9
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 2.4e-172 609.0 363 80.2
HanXRQChr13g0417851 Helianthus annuus HOM05D006567 ORTHO05D009430 1.6e-171 606.3 363 77.4
Nitab4.5_0001381g0120 Nicotiana tabacum HOM05D006567 ORTHO05D009430 6.6e-170 600.9 367 78.7
Lsat_1_v5_gn_6_92541 Lactuca sativa HOM05D006567 ORTHO05D009430 1.1e-169 600.1 362 77.3
EL10Ac5g12369 Beta vulgaris HOM05D006567 ORTHO05D009430 1.9e-169 599.4 361 80.1
EL10Ac5g12374 Beta vulgaris HOM05D006567 ORTHO05D009430 2.5e-169 599.0 361 80.1
SGA_v2.0_scaffold26G11306 Striga asiatica HOM05D006567 ORTHO05D009430 1.8e-167 592.8 374 76.5
Carub.0007s2404 Capsella rubella HOM05D006567 ORTHO05D009430 1.2e-166 590.1 364 77.5
BcaNung03466 Brassica carinata HOM05D006567 ORTHO05D009430 2.6e-166 589.0 368 77.7
CARHR223980 Cardamine hirsuta HOM05D006567 ORTHO05D009430 2.6e-166 589.0 364 76.9
AUR62019967 Chenopodium quinoa HOM05D006567 ORTHO05D009430 9.9e-166 587.0 352 78.7
Thhalv10025513m.g Eutrema salsugineum HOM05D006567 ORTHO05D009430 9.9e-166 587.0 360 77.5
A03p50390 Brassica napus HOM05D006567 ORTHO05D009430 2.9e-165 585.5 367 75.7
BraA03t14129Z Brassica rapa HOM05D006567 ORTHO05D009430 4.9e-165 584.7 367 75.7
Sp7g16810 Schrenkiella parvula HOM05D006567 ORTHO05D009430 8.4e-165 583.9 364 76.6
THA.LOC104806666 Tarenaya hassleriana HOM05D006567 ORTHO05D009430 8.4e-165 583.9 365 76.2
PSO170G1323 Papaver somniferum HOM05D006567 ORTHO05D009430 1.1e-164 583.6 387 74.7
BolC7t45378H Brassica oleracea HOM05D006567 ORTHO05D009430 2.4e-164 582.4 368 76.6
AT4G17370 Arabidopsis thaliana HOM05D006567 ORTHO05D009430 3.2e-164 582.0 362 77.1
Nitab4.5_0002289g0070 Nicotiana tabacum HOM05D006567 ORTHO05D009430 3.2e-164 582.0 366 76.8
ATR0057G105 Amborella trichopoda HOM05D006567 ORTHO05D009430 5.5e-164 581.3 366 74.9
PSO017G4082 Papaver somniferum HOM05D006567 ORTHO05D009430 4.6e-163 578.2 385 73.2
AL7G37340 Arabidopsis lyrata HOM05D006567 ORTHO05D009430 2.3e-162 575.9 375 74.7
HPP92_025881 Vanilla planifolia HOM05D006567 ORTHO05D009430 1.1e-159 567.0 367 74.7
Aa31LG1G23140 Aethionema arabicum HOM05D006567 ORTHO05D009430 4.0e-159 565.1 359 74.4
SEGI_34288 Sequoiadendron giganteum HOM05D006567 ORTHO05D009430 3.0e-154 548.9 365 72.1
unitig_899.g15594 Utricularia gibba HOM05D006567 ORTHO05D009430 3.1e-151 538.9 361 72.0
AUR62007104 Chenopodium quinoa HOM05D006567 ORTHO05D009430 1.2e-150 537.0 352 73.9
CiPaw.11G081200 Carya illinoinensis HOM05D006567 ORTHO05D009430 2.9e-149 532.3 300 86.7
Os08g0148267 Oryza sativa ssp. japonica HOM05D006567 ORTHO05D009430 1.3e-144 516.9 303 82.2
Manes.01G082300 Manihot esculenta HOM05D006567 ORTHO05D009430 1.6e-144 516.5 284 87.3
Prupe.5G066000 Prunus persica HOM05D006567 ORTHO05D009430 1.2e-142 510.4 273 87.5
Dinv39160 Davidia involucrata HOM05D006567 ORTHO05D009430 1.1e-140 503.8 284 85.6
AagrBONN_evm.TU.Sc2ySwM_228.3639 Anthoceros agrestis HOM05D006567 ORTHO05D009430 5.1e-138 495.0 367 64.0
Pp3c4_15440 Physcomitrium patens HOM05D006567 ORTHO05D009430 2.6e-134 482.6 368 64.4
SMO228G0171 Selaginella moellendorffii HOM05D006567 ORTHO05D009430 7.7e-134 481.1 363 65.8
Mapoly0040s0044 Marchantia polymorpha HOM05D006567 ORTHO05D009430 1.0e-133 480.7 365 62.5
Sed0022818 Sechium edule HOM05D006567 ORTHO05D009430 7.2e-132 474.6 272 83.1
Zm00001eb416490 Zea mays HOM05D006567 ORTHO05D009430 2.0e-126 456.4 306 73.2
Lj2C221T14 Lonicera japonica HOM05D006567 ORTHO05D009430 1.5e-116 423.7 243 84.8
FvH4_5g19170 Fragaria vesca HOM05D006567 ORTHO05D009430 4.8e-112 408.7 227 83.3
GSVIVG01004725001 Vitis vinifera HOM05D006567 ORTHO05D009430 2.4e-111 406.4 227 85.9
Rhsim09G0000200 Rhododendron simsii HOM05D006567 ORTHO05D009430 5.9e-110 401.7 414 51.2
Sc07g0009260 Simmondsia chinensis HOM05D006567 ORTHO05D009430 8.5e-109 397.9 223 82.5
Glyma.17G143100 Glycine max HOM05D006567 ORTHO05D009430 2.0e-81 307.0 185 78.4
BcaC06g33541 Brassica carinata HOM05D006567 ORTHO05D009430 3.5e-70 269.6 212 64.6
QL08p052096 Quercus lobata HOM05D006567 ORTHO05D015939 2.3e-53 213.8 118 83.1
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 1.1e-52 211.5 128 76.6
FvH4_5g07380 Fragaria vesca HOM05D006567 ORTHO05D015939 2.4e-50 203.8 118 78.8
FAN04G0922 Fragaria x ananassa HOM05D006567 ORTHO05D015939 3.8e-48 196.4 120 75.8
FAN09G0929 Fragaria x ananassa HOM05D006567 ORTHO05D015939 8.4e-48 195.3 119 76.5
FAN22G0783 Fragaria x ananassa HOM05D006567 ORTHO05D015939 8.4e-48 195.3 119 76.5
FvH4_3g36620 Fragaria vesca HOM05D006567 ORTHO05D015939 1.2e-46 191.4 119 76.5
FAN27G0484 Fragaria x ananassa HOM05D006567 ORTHO05D015939 3.9e-45 186.4 120 73.3
Rhsim09G0000100 Rhododendron simsii HOM05D006567 ORTHO05D009430 5.3e-34 149.4 95 78.9
BcaC06g33542 Brassica carinata HOM05D006567 ORTHO05D015939 6.9e-34 149.1 96 74.0
FAN28G1973 Fragaria x ananassa HOM05D006567 ORTHO05D015939 2.8e-19 100.5 80 61.2
TPR.G40300 Trifolium pratense HOM05D006567 ORTHO05D412752 1.5e-12 78.2 54 70.4
TPR.G24425 Trifolium pratense HOM05D006567 ORTHO05D411483 2.6e-12 77.4 54 68.5
TPR.G2696 Trifolium pratense HOM05D006567 ORTHO05D411767 2.6e-12 77.4 54 70.4
TPR.G2679 Trifolium pratense HOM05D006567 ORTHO05D412848 8.2e-11 72.4 54 66.7
Pp3s34_460 Physcomitrium patens HOM05D001684 ORTHO05D018939 5.3e-10 69.7 288 26.4
AL7G37260 Arabidopsis lyrata HOM05D006567 ORTHO05D015939 5.9e-09 66.2 43 67.4
Pp3s96_60 Physcomitrium patens HOM05D016182 ORTHO05D028865 1.3e-08 65.1 282 24.5
EL10Ac4g09527 Beta vulgaris HOM05D006567 ORTHO05D010541 2.7e-06 57.4 63 49.2


User provided reference genes

Program Settings