Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G0325 Cannabis sativa HOM05D006861 ORTHO05D008620 3.3e-130 468.4 240 100.0
QL12p006269 Quercus lobata HOM05D006861 ORTHO05D008620 1.4e-91 340.1 263 67.7
Prupe.5G041200 Prunus persica HOM05D006861 ORTHO05D008620 1.5e-90 336.7 244 71.3
Actinidia14818 Actinidia chinensis HOM05D006861 ORTHO05D008620 4.1e-88 328.6 220 72.7
Potri.003G089400 Populus trichocarpa HOM05D006861 ORTHO05D008620 1.6e-87 326.6 240 68.3
CiPaw.11G090800 Carya illinoinensis HOM05D006861 ORTHO05D008620 2.7e-87 325.9 241 68.0
Dinv28930 Davidia involucrata HOM05D006861 ORTHO05D008620 7.8e-87 324.3 226 69.0
MD06G1031100 Malus domestica HOM05D006861 ORTHO05D008620 7.8e-87 324.3 249 69.5
RcHm_v2.0_Chr7g0209081 Rosa chinensis HOM05D006861 ORTHO05D008620 1.3e-86 323.6 240 69.6
Lj4g0014575 Lotus japonicus HOM05D006861 ORTHO05D008620 3.0e-86 322.4 220 72.3
QL12p006401 Quercus lobata HOM05D006861 ORTHO05D008620 5.0e-86 321.6 312 56.7
Psat4g079280 Pisum sativum HOM05D006861 ORTHO05D008620 8.6e-86 320.9 218 72.5
TPR.G28655 Trifolium pratense HOM05D006861 ORTHO05D008620 1.1e-85 320.5 240 68.8
arahy.Tifrunner.gnm1.ann1.A00F14 Arachis hypogaea HOM05D006861 ORTHO05D008620 1.5e-85 320.1 216 73.1
CSS0041220 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 1.5e-85 320.1 225 70.7
VMungo0251G0361 Vigna mungo HOM05D006861 ORTHO05D008620 1.5e-85 320.1 217 71.4
FvH4_5g21620 Fragaria vesca HOM05D006861 ORTHO05D008620 1.9e-85 319.7 216 73.1
Medtr4g098640 Medicago truncatula HOM05D006861 ORTHO05D008620 1.9e-85 319.7 220 71.4
CSS0014670 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 9.5e-85 317.4 225 69.8
Ca_22062_v3 Cicer arietinum L. HOM05D006861 ORTHO05D008620 1.6e-84 316.6 240 67.5
Haze_08270 Corylus avellana HOM05D006861 ORTHO05D008620 1.6e-84 316.6 250 66.4
arahy.Tifrunner.gnm1.ann1.P9U8RJ Arachis hypogaea HOM05D006861 ORTHO05D008620 2.1e-84 316.2 230 69.1
FAN18G0349 Fragaria x ananassa HOM05D006861 ORTHO05D008620 3.6e-84 315.5 213 72.8
Sabra03G0059200 Salix brachista HOM05D006861 ORTHO05D008620 4.7e-84 315.1 240 66.2
Glyma.17G153700 Glycine max HOM05D006861 ORTHO05D008620 8.0e-84 314.3 218 71.6
FAN04G0264 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.4e-83 313.5 215 73.0
FAN08G0129 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.4e-83 313.5 216 74.1
Lalb_Chr09g0329521 Lupinus albus HOM05D006861 ORTHO05D008620 1.4e-83 313.5 240 67.1
Manes.17G013800 Manihot esculenta HOM05D006861 ORTHO05D008620 1.4e-83 313.5 245 64.9
GSVIVG01013176001 Vitis vinifera HOM05D006861 ORTHO05D008620 1.8e-83 313.2 214 69.2
Hma1.2p1_0585F.1_g183570 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 8.9e-83 310.8 214 70.6
Rhsim07G0124500 Rhododendron simsii HOM05D006861 ORTHO05D008620 8.9e-83 310.8 215 73.0
Glyma.05G113600 Glycine max HOM05D006861 ORTHO05D008620 1.2e-82 310.5 218 71.6
Cfa012408 Carpinus fangiana HOM05D006861 ORTHO05D008620 1.5e-82 310.1 251 64.5
FAN13G1018 Fragaria x ananassa HOM05D006861 ORTHO05D008620 7.5e-82 307.8 237 69.2
Thecc.03G231500 Theobroma cacao HOM05D006861 ORTHO05D008620 7.5e-82 307.8 240 65.8
Eucgr.D02180 Eucalyptus grandis HOM05D006861 ORTHO05D008620 7.0e-80 301.2 218 67.4
Duzib068G0493 Durio zibethinus HOM05D006861 ORTHO05D008620 1.2e-79 300.4 239 64.4
TAR629G3318 Trochodendron aralioides HOM05D006861 ORTHO05D008620 4.6e-79 298.5 226 69.0
Lsat_1_v5_gn_8_112001 Lactuca sativa HOM05D006861 ORTHO05D008620 1.3e-78 297.0 218 65.1
Gohir.D12G212500 Gossypium hirsutum HOM05D006861 ORTHO05D008620 3.9e-78 295.4 240 63.8
Cc08_g02400 Coffea canephora HOM05D006861 ORTHO05D008620 5.0e-78 295.0 213 70.0
THA.LOC104807964 Tarenaya hassleriana HOM05D006861 ORTHO05D008620 5.0e-78 295.0 223 63.2
DCAR_008287 Daucus carota HOM05D006861 ORTHO05D008620 1.1e-77 293.9 217 63.6
Gohir.A12G209800 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.1e-77 293.9 240 63.3
Duzib205G0961 Durio zibethinus HOM05D006861 ORTHO05D008620 1.5e-77 293.5 240 63.3
HanXRQChr16g0511531 Helianthus annuus HOM05D006861 ORTHO05D008620 1.9e-77 293.1 214 64.5
Sc07g0008780 Simmondsia chinensis HOM05D006861 ORTHO05D008620 1.9e-77 293.1 240 61.2
Aqoxy3G02463 Aquilegia oxysepala HOM05D006861 ORTHO05D008620 3.3e-77 292.4 214 66.8
EL10Ac5g12163 Beta vulgaris HOM05D006861 ORTHO05D008620 3.3e-77 292.4 216 69.4
Nitab4.5_0000535g0140 Nicotiana tabacum HOM05D006861 ORTHO05D008620 2.8e-76 289.3 218 62.8
Gohir.D03G170200 Gossypium hirsutum HOM05D006861 ORTHO05D008620 6.2e-76 288.1 240 61.7
SalBow6G5529 Salvia bowleyana HOM05D006861 ORTHO05D008620 1.8e-75 286.6 221 63.3
Ah.12g054700 Amaranthus hybridus HOM05D006861 ORTHO05D008620 2.3e-75 286.2 216 66.2
Gorai.003G180500 Gossypium raimondii HOM05D006861 ORTHO05D008620 3.1e-75 285.8 240 61.2
ATR0049G013 Amborella trichopoda HOM05D006861 ORTHO05D008620 6.8e-75 284.6 218 62.8
CsaV3_3G001910 Cucumis sativus L. HOM05D006861 ORTHO05D008620 1.2e-74 283.9 217 64.1
Nitab4.5_0007026g0050 Nicotiana tabacum HOM05D006861 ORTHO05D008620 1.2e-74 283.9 228 60.5
MELO3C013865.2 Cucumis melo HOM05D006861 ORTHO05D008620 2.0e-74 283.1 240 60.0
Gohir.A03G002100 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.6e-74 282.7 240 60.8
AUR62007255 Chenopodium quinoa HOM05D006861 ORTHO05D008620 3.4e-74 282.3 215 63.7
MSTRG.12154 Avicennia marina HOM05D006861 ORTHO05D008620 5.8e-74 281.6 221 61.5
Ciclev10032685m.g Citrus clementina HOM05D006861 ORTHO05D008620 5.8e-74 281.6 221 64.3
COL.COLO4_17076 Corchorus olitorius HOM05D006861 ORTHO05D008620 5.8e-74 281.6 240 63.3
Gorai.008G228100 Gossypium raimondii HOM05D006861 ORTHO05D008620 5.8e-74 281.6 251 60.6
ClCG10G001830 Citrullus lanatus HOM05D006861 ORTHO05D008620 1.3e-73 280.4 217 64.1
Sed0027053 Sechium edule HOM05D006861 ORTHO05D008620 1.7e-73 280.0 252 58.3
CARHR129520 Cardamine hirsuta HOM05D006861 ORTHO05D008620 2.2e-73 279.6 234 62.8
CAN.G845.34 Capsicum annuum HOM05D006861 ORTHO05D008620 2.9e-73 279.3 226 59.7
PGSC0003DMG400020500 Solanum tuberosum HOM05D006861 ORTHO05D008620 4.9e-73 278.5 218 61.5
Carub.0004s1705 Capsella rubella HOM05D006861 ORTHO05D008620 1.1e-72 277.3 214 63.6
ECA233G2855 Erigeron canadensis HOM05D006861 ORTHO05D008620 1.1e-72 277.3 229 59.4
PSO782G3300 Papaver somniferum HOM05D006861 ORTHO05D008620 1.4e-72 276.9 218 61.9
Migut.A01006 Erythranthe guttata HOM05D006861 ORTHO05D008620 1.9e-72 276.6 221 61.1
SGA_v2.0_scaffold198G41105 Striga asiatica HOM05D006861 ORTHO05D008620 2.4e-72 276.2 221 61.1
AT2G35360 Arabidopsis thaliana HOM05D006861 ORTHO05D008620 3.2e-72 275.8 214 63.1
PSO063G6338 Papaver somniferum HOM05D006861 ORTHO05D008620 5.4e-72 275.0 218 61.5
Sp4g17580 Schrenkiella parvula HOM05D006861 ORTHO05D008620 1.2e-71 273.9 232 61.2
Aa31LG9G15370 Aethionema arabicum HOM05D006861 ORTHO05D008620 1.6e-71 273.5 219 61.2
Peaxi162Scf00102g00630 Petunia axillaris HOM05D006861 ORTHO05D008620 2.1e-71 273.1 240 59.6
vmacro14159 Vaccinium macrocarpon HOM05D006861 ORTHO05D008620 2.1e-71 273.1 209 67.0
Sopen08g002990 Solanum pennellii HOM05D006861 ORTHO05D008620 2.7e-71 272.7 218 61.0
Solyc08g007030.3 Solanum lycopersicum HOM05D006861 ORTHO05D008620 3.5e-71 272.3 218 60.1
Thhalv10017211m.g Eutrema salsugineum HOM05D006861 ORTHO05D008620 6.0e-71 271.6 215 64.2
AL4G31410 Arabidopsis lyrata HOM05D006861 ORTHO05D008620 3.0e-70 269.2 226 61.1
A05p10410 Brassica napus HOM05D006861 ORTHO05D008620 3.9e-70 268.9 218 60.6
BraA05t19976Z Brassica rapa HOM05D006861 ORTHO05D008620 6.6e-70 268.1 219 62.6
BcaC02g11640 Brassica carinata HOM05D006861 ORTHO05D008620 8.6e-70 267.7 219 62.6
C04p12840 Brassica napus HOM05D006861 ORTHO05D008620 8.6e-70 267.7 219 62.6
BolC4t22928H Brassica oleracea HOM05D006861 ORTHO05D008620 8.6e-70 267.7 219 62.6
BcaB02g09437 Brassica carinata HOM05D006861 ORTHO05D008620 5.6e-69 265.0 219 62.1
Nn6g33632 Nelumbo nucifera HOM05D006861 ORTHO05D008620 2.8e-68 262.7 273 54.9
HPP92_028475 Vanilla planifolia HOM05D006861 ORTHO05D008620 1.4e-67 260.4 216 60.2
TWI60G1564 Tripterygium wilfordii HOM05D006861 ORTHO05D008620 2.3e-67 259.6 240 57.1
HPP92_027725 Vanilla planifolia HOM05D006861 ORTHO05D008620 2.3e-67 259.6 216 60.2
AUR62018744 Chenopodium quinoa HOM05D006861 ORTHO05D008620 1.4e-64 250.4 229 55.5
Phvul.003G229300 Phaseolus vulgaris HOM05D006861 ORTHO05D008620 2.7e-63 246.1 160 73.8
Os09g0573100 Oryza sativa ssp. japonica HOM05D006861 ORTHO05D008620 3.5e-63 245.7 214 58.9
CDE12G0071 Ceratophyllum demersum HOM05D006861 ORTHO05D008620 1.7e-62 243.4 194 59.3
Hma1.2p1_0585F.1_g183580 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 3.9e-62 242.3 213 60.6
Zm00001eb307090 Zea mays HOM05D006861 ORTHO05D008620 2.5e-61 239.6 217 56.7
SEGI_11276 Sequoiadendron giganteum HOM05D006861 ORTHO05D008620 8.4e-57 224.6 216 48.1
Dinv25198 Davidia involucrata HOM05D006861 ORTHO05D008620 1.4e-56 223.8 143 76.2
Lj2A243G18 Lonicera japonica HOM05D006861 ORTHO05D008620 1.4e-56 223.8 147 70.7
Actinidia09224 Actinidia chinensis HOM05D006861 ORTHO05D008620 1.6e-55 220.3 141 75.2
Cpa.g.sc90.59 Carica papaya HOM05D006861 ORTHO05D008620 1.3e-52 210.7 147 69.4
Gohir.A09G039700 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.6e-50 203.0 147 68.0
Pp3c1_27050 Physcomitrium patens HOM05D006861 ORTHO05D008620 5.8e-50 201.8 216 47.7
Hma1.2p1_2232F.1_g317620 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 8.1e-44 181.4 215 48.4
HanXRQChr16g0517491 Helianthus annuus HOM05D006861 ORTHO05D008620 1.8e-38 163.7 114 64.9
Atru.BG.44.p Acer truncatum HOM05D006861 ORTHO05D008620 5.1e-38 162.2 115 66.1
CBR_g57857 Chara braunii HOM05D006861 ORTHO05D008620 2.8e-28 129.8 191 41.9
Cre12.g533400 Chlamydomonas reinhardtii HOM05D006861 ORTHO05D008620 1.2e-15 87.8 180 35.0
PRCOL_00000188 Prasinoderma coloniale HOM05D006861 ORTHO05D008620 3.1e-11 73.2 102 38.2
Gohir.A01G114301 Gossypium hirsutum HOM05D006861 ORTHO05D008620 8.0e-07 58.5 58 58.6
MCO13G047 Micromonas commoda HOM05D006861 ORTHO05D008620 2.3e-06 57.0 212 27.4


User provided reference genes

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