Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 3.5e-135 485.0 242 100.0
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 2.3e-107 392.5 238 83.2
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 4.3e-101 371.7 242 77.3
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 1.1e-99 367.1 242 76.0
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 1.4e-99 366.7 242 77.3
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 8.9e-99 364.0 243 75.7
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 2.0e-98 362.8 208 84.6
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 6.4e-97 357.8 218 80.7
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 1.4e-96 356.7 232 75.0
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 2.4e-96 355.9 207 83.6
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 5.4e-96 354.8 208 82.2
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 3.5e-95 352.1 239 73.2
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 1.0e-94 350.5 235 73.6
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 6.6e-94 347.8 244 70.5
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 8.6e-94 347.4 244 72.5
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 3.3e-93 345.5 238 69.3
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 3.3e-93 345.5 238 71.0
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 3.3e-93 345.5 239 72.0
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 9.6e-93 344.0 227 74.0
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 2.1e-92 342.8 234 72.2
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 6.2e-92 341.3 237 70.0
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 2.4e-91 339.3 240 71.2
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 2.4e-91 339.3 241 70.1
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 3.1e-91 339.0 236 71.6
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 4.0e-91 338.6 236 72.5
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 6.8e-91 337.8 208 78.8
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 8.9e-91 337.4 237 68.4
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 1.5e-90 336.7 200 79.0
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 1.5e-90 336.7 238 69.7
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 2.0e-90 336.3 234 70.1
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 2.0e-90 336.3 206 76.2
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 2.6e-90 335.9 241 69.3
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 5.8e-90 334.7 236 70.8
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 4.9e-89 331.6 235 68.9
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 4.9e-89 331.6 241 70.1
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 8.4e-89 330.9 234 69.2
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 1.4e-88 330.1 242 68.6
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 3.2e-88 328.9 236 70.8
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 4.2e-88 328.6 198 77.8
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 4.2e-88 328.6 234 70.1
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 7.1e-88 327.8 235 67.2
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 1.2e-87 327.0 242 68.2
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 1.6e-87 326.6 235 70.2
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 1.6e-87 326.6 237 68.8
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 6.0e-87 324.7 243 68.7
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 7.8e-87 324.3 238 69.3
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 1.0e-86 323.9 230 69.6
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 1.3e-86 323.6 254 61.4
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 2.3e-86 322.8 208 75.5
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 2.3e-86 322.8 201 74.1
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 3.0e-86 322.4 235 69.4
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 3.9e-86 322.0 197 77.7
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 5.1e-86 321.6 233 67.0
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 1.5e-85 320.1 205 74.6
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 1.5e-85 320.1 204 73.5
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 1.9e-85 319.7 199 74.9
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 2.5e-85 319.3 206 74.8
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 2.5e-85 319.3 207 72.0
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 2.5e-85 319.3 190 76.8
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 9.6e-85 317.4 201 73.6
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 9.6e-85 317.4 201 73.6
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 2.1e-84 316.2 253 66.0
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 2.1e-84 316.2 233 67.4
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 2.8e-84 315.8 245 63.7
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 2.8e-84 315.8 245 63.7
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 4.8e-84 315.1 240 62.9
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 6.2e-84 314.7 208 72.6
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 8.1e-84 314.3 233 67.4
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 1.4e-83 313.5 250 61.6
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.8e-83 313.2 203 73.4
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 4.0e-83 312.0 201 72.6
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 6.9e-83 311.2 236 66.5
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 1.5e-82 310.1 288 57.6
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 2.0e-82 309.7 235 64.3
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 2.0e-82 309.7 179 81.0
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 1.3e-81 307.0 202 71.8
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 1.7e-81 306.6 258 60.9
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 2.9e-81 305.8 202 70.3
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 1.4e-80 303.5 241 63.1
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 1.2e-79 300.4 233 63.5
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 7.9e-79 297.7 230 63.9
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 1.0e-78 297.4 248 60.5
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 6.6e-78 294.7 181 77.3
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 1.3e-76 290.4 206 68.0
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 1.3e-76 290.4 329 51.1
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 8.1e-76 287.7 236 62.7
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 3.1e-75 285.8 240 60.8
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 6.9e-75 284.6 202 65.3
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 1.5e-74 283.5 244 59.4
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 1.3e-73 280.4 235 58.7
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 3.8e-73 278.9 236 58.5
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 1.2e-71 273.9 175 77.1
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 3.5e-71 272.3 175 77.1
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 1.4e-67 260.4 196 62.8
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 1.4e-67 260.4 202 60.9
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 6.9e-67 258.1 215 60.9
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 4.2e-64 248.8 170 72.4
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 3.5e-63 245.7 180 65.6
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 1.0e-62 244.2 156 74.4
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 1.9e-61 240.0 172 69.8
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 5.3e-59 231.9 148 76.4
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 4.2e-56 222.2 201 52.7
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.6e-52 210.3 182 60.4
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 2.7e-47 193.0 138 67.4
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 3.6e-47 192.6 114 78.1
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 3.3e-45 186.0 168 51.2
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 2.9e-41 172.9 121 69.4
Glyma.05G216200 Glycine max HOM05D006525 ORTHO05D007845 5.0e-41 172.2 112 75.0
Hma1.2p1_0359F.1_g135320 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 5.0e-41 172.2 112 73.2
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 3.0e-38 162.9 87 83.9
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 3.6e-31 139.4 127 60.6
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 1.4e-30 137.5 84 77.4
MD06G1104500 Malus domestica HOM05D006525 ORTHO05D007845 2.3e-30 136.7 119 64.7
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 1.5e-29 134.0 91 71.4
CSS0015265 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 7.5e-29 131.7 94 70.2
TPR.G20444 Trifolium pratense HOM05D006525 ORTHO05D007845 2.8e-28 129.8 85 77.6
ATR0589G090 Amborella trichopoda HOM05D006525 ORTHO05D007845 3.8e-25 119.4 87 66.7
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 6.5e-25 118.6 70 77.1
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 1.0e-22 111.3 86 58.1
AagrBONN_evm.TU.Sc2ySwM_368.643 Anthoceros agrestis HOM05D006525 ORTHO05D007845 7.5e-21 105.1 79 57.0
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 9.8e-21 104.8 68 69.1
Sc22g0005070 Simmondsia chinensis HOM05D006525 ORTHO05D007845 1.1e-16 91.3 67 62.7
PGSC0003DMG400026824 Solanum tuberosum HOM05D006525 ORTHO05D007845 4.7e-15 85.9 72 58.3
Lalb_Chr09g0332581 Lupinus albus HOM05D006525 ORTHO05D007845 4.9e-12 75.9 52 73.1


User provided reference genes

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