Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G0038 Cannabis sativa HOM05D008401 ORTHO05D002765 1.9e-84 315.8 163 100.0
CANSAT80G0333 Cannabis sativa HOM05D000017 ORTHO05D000013 8.4e-77 290.4 155 94.2
CANSAT01G1096 Cannabis sativa HOM05D000017 ORTHO05D000013 8.7e-74 280.4 155 94.8
CANSAT78G0321 Cannabis sativa HOM05D010396 ORTHO05D002765 1.9e-73 279.3 155 94.2
CANSAT25G0180 Cannabis sativa HOM05D000017 ORTHO05D000013 1.9e-60 236.1 134 86.6
CANSAT11G0986 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-59 233.4 163 77.3
CANSAT78G1392 Cannabis sativa HOM05D000017 ORTHO05D000013 2.3e-58 229.2 129 89.1
CANSAT80G1576 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-50 203.4 102 96.1
CANSAT78G2345 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-49 199.5 102 94.1
CANSAT80G1918 Cannabis sativa HOM05D000017 ORTHO05D000013 5.7e-49 198.0 102 93.1
CANSAT21G0992 Cannabis sativa HOM05D010396 ORTHO05D002765 1.7e-48 196.4 122 89.3
CANSAT25G0681 Cannabis sativa HOM05D000017 ORTHO05D000013 7.0e-47 191.0 102 94.1
CANSAT56G3775 Cannabis sativa HOM05D000017 ORTHO05D002765 7.0e-47 191.0 95 95.8
CANSAT25G3326 Cannabis sativa HOM05D000017 ORTHO05D002765 4.5e-46 188.3 106 88.7
CANSAT54G0413 Cannabis sativa HOM05D008401 ORTHO05D002765 5.9e-46 188.0 108 86.1
CANSAT78G0529 Cannabis sativa HOM05D010396 ORTHO05D002765 2.2e-37 159.5 98 91.8
ATR0727G001 Amborella trichopoda HOM05D000017 ORTHO05D000013 1.8e-31 139.8 143 52.4
CANSAT64G0409 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-30 137.1 127 52.0
CANSAT21G1876 Cannabis sativa HOM05D000017 ORTHO05D000013 1.0e-29 134.0 108 60.2
CANSAT01G2679 Cannabis sativa HOM05D010396 ORTHO05D002765 2.3e-29 132.9 87 87.4
CANSAT54G1361 Cannabis sativa HOM05D000017 ORTHO05D000013 8.6e-29 131.0 146 46.6
CANSAT56G3361 Cannabis sativa HOM05D008401 ORTHO05D002765 8.0e-27 124.4 153 48.4
CANSAT01G1220 Cannabis sativa HOM05D000017 ORTHO05D000013 1.0e-26 124.0 138 49.3
CANSAT11G1223 Cannabis sativa HOM05D000017 ORTHO05D000013 1.0e-26 124.0 138 49.3
CANSAT01G0081 Cannabis sativa HOM05D000017 ORTHO05D000013 3.0e-26 122.5 153 47.7
CANSAT54G0083 Cannabis sativa HOM05D010396 ORTHO05D000013 2.0e-22 109.8 153 43.1
CANSAT54G2057 Cannabis sativa HOM05D000017 ORTHO05D000013 1.0e-21 107.5 102 49.0
CANSAT35G0979 Cannabis sativa HOM05D000017 ORTHO05D000013 3.9e-21 105.5 100 49.0
CANSAT35G1006 Cannabis sativa HOM05D000017 ORTHO05D000013 5.6e-20 101.7 80 56.2
CANSAT56G0367 Cannabis sativa HOM05D000017 ORTHO05D000013 3.6e-19 99.0 132 39.4
CANSAT35G1021 Cannabis sativa HOM05D000017 ORTHO05D000013 6.1e-19 98.2 80 55.0
Nitab4.5_0000229g0080 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.0e-18 97.4 90 45.6
CANSAT35G0692 Cannabis sativa HOM05D010396 ORTHO05D002765 2.9e-16 89.4 125 44.8
CANSAT64G1942 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-14 84.0 133 36.1
Nitab4.5_0002430g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.2e-14 84.0 90 43.3
CANSAT21G2334 Cannabis sativa HOM05D000017 ORTHO05D000013 1.0e-13 80.9 114 38.6
CANSAT25G3317 Cannabis sativa HOM05D010396 ORTHO05D002765 1.0e-13 80.9 62 79.0
Nitab4.5_0000569g0080 Nicotiana tabacum HOM05D009153 ORTHO05D002765 2.3e-13 79.7 90 43.3
Nitab4.5_0000377g0030 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.0e-13 79.3 90 42.2
Nitab4.5_0000026g0270 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.9e-13 79.0 127 33.1
Nitab4.5_0007303g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.9e-13 79.0 101 41.6
Nitab4.5_0002944g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.0e-13 78.6 91 44.0
Nitab4.5_0027852g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.0e-13 78.6 127 33.9
Nitab4.5_0012915g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 6.6e-13 78.2 90 40.0
Nitab4.5_0001614g0160 Nicotiana tabacum HOM05D008401 ORTHO05D002765 8.6e-13 77.8 123 35.0
Nitab4.5_0000854g0030 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.1e-12 77.4 90 38.9
CANSAT25G1793 Cannabis sativa HOM05D000017 ORTHO05D000013 1.5e-12 77.0 162 35.2
Nitab4.5_0000034g0050 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.5e-12 77.0 73 47.9
Nitab4.5_0003994g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.5e-12 76.3 127 33.1
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 2.5e-12 76.3 80 43.8
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-12 76.3 80 43.8
Nitab4.5_0006446g0050 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.3e-12 75.9 90 40.0
CANSAT11G2629 Cannabis sativa HOM05D000017 ORTHO05D000013 4.3e-12 75.5 113 37.2
Nitab4.5_0000074g0150 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.6e-12 75.1 109 37.6
Nitab4.5_0003408g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.6e-12 75.1 102 42.2
CANSAT25G1873 Cannabis sativa HOM05D000017 ORTHO05D000013 7.3e-12 74.7 133 33.8
CANSAT56G1010 Cannabis sativa HOM05D000017 ORTHO05D000013 9.5e-12 74.3 111 34.2
CANSAT64G3012 Cannabis sativa HOM05D000017 ORTHO05D000013 9.5e-12 74.3 111 34.2
CANSAT80G2780 Cannabis sativa HOM05D000017 ORTHO05D000013 9.5e-12 74.3 111 36.9
Nitab4.5_0012044g0020 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.6e-11 73.6 81 43.2
CANSAT64G0129 Cannabis sativa HOM05D000017 ORTHO05D000013 3.6e-11 72.4 112 36.6
CANSAT54G1694 Cannabis sativa HOM05D000017 ORTHO05D000013 4.7e-11 72.0 111 35.1
Oeu041330.1 Olea europaea HOM05D000017 ORTHO05D000013 4.7e-11 72.0 105 34.3
CANSAT78G2408 Cannabis sativa HOM05D000017 ORTHO05D000013 6.2e-11 71.6 80 41.2
Nitab4.5_0007069g0020 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.1e-10 70.9 79 43.0
TAR423G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 1.1e-10 70.9 96 36.5
CANSAT25G1145 Cannabis sativa HOM05D000017 ORTHO05D000013 1.8e-10 70.1 152 29.6
CANSAT35G0454 Cannabis sativa HOM05D000017 ORTHO05D000013 1.8e-10 70.1 81 37.0
CANSAT01G2588 Cannabis sativa HOM05D000017 ORTHO05D000013 2.3e-10 69.7 127 46.5
Sopen05g022560 Solanum pennellii HOM05D000017 ORTHO05D000013 3.1e-10 69.3 114 37.7
CANSAT21G1471 Cannabis sativa HOM05D000017 ORTHO05D000013 4.0e-10 68.9 151 29.1
Nitab4.5_0000021g0980 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.0e-10 68.9 98 39.8
Nitab4.5_0003288g0080 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.0e-10 68.9 105 32.4
CANSAT21G1475 Cannabis sativa HOM05D000017 ORTHO05D000013 5.2e-10 68.6 94 36.2
CANSAT25G1251 Cannabis sativa HOM05D000017 ORTHO05D000013 5.2e-10 68.6 98 32.7
CANSAT35G1872 Cannabis sativa HOM05D000017 ORTHO05D000013 6.8e-10 68.2 151 28.5
Nitab4.5_0000403g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 6.8e-10 68.2 71 42.3
Oeu016698.1 Olea europaea HOM05D000017 ORTHO05D000013 6.8e-10 68.2 105 32.4
CANSAT35G1887 Cannabis sativa HOM05D000017 ORTHO05D000013 8.9e-10 67.8 130 34.6
CANSAT54G1096 Cannabis sativa HOM05D000017 ORTHO05D000013 8.9e-10 67.8 130 34.6
Nitab4.5_0010319g0060 Nicotiana tabacum HOM05D007248 ORTHO05D002765 8.9e-10 67.8 86 38.4
Oeu030213.1 Olea europaea HOM05D000017 ORTHO05D000013 1.2e-09 67.4 152 29.6
CANSAT01G0559 Cannabis sativa HOM05D000017 ORTHO05D000013 1.5e-09 67.0 106 32.1
TAR257G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 1.5e-09 67.0 72 38.9
Nitab4.5_0000692g0140 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.6e-09 66.2 80 38.8
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.6e-09 66.2 86 37.2
Nitab4.5_0008036g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.6e-09 66.2 94 38.3
Nitab4.5_0010885g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.6e-09 66.2 68 44.1
Nitab4.5_0007528g0020 Nicotiana tabacum HOM05D009153 ORTHO05D011903 3.4e-09 65.9 111 35.1
Peaxi162Scf00827g00217 Petunia axillaris HOM05D009153 ORTHO05D011903 4.4e-09 65.5 73 42.5
CANSAT78G1212 Cannabis sativa HOM05D000017 ORTHO05D000013 5.8e-09 65.1 81 37.0
Nitab4.5_0001212g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.8e-09 65.1 101 34.7
Nitab4.5_0008791g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.8e-09 65.1 88 40.9
Nitab4.5_0008559g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000013 7.5e-09 64.7 86 36.0
Oeu019782.1 Olea europaea HOM05D012404 ORTHO05D002765 7.5e-09 64.7 98 34.7
CANSAT78G0171 Cannabis sativa HOM05D000017 ORTHO05D000013 9.8e-09 64.3 77 35.1
MBI14_g32122_MAGBIO Magnolia biondii HOM05D004126 ORTHO05D010914 9.8e-09 64.3 93 36.6
Nitab4.5_0000444g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 9.8e-09 64.3 121 33.1
Nitab4.5_0009017g0010 Nicotiana tabacum HOM05D000017 ORTHO05D002765 1.3e-08 63.9 86 36.0
Oeu034871.1 Olea europaea HOM05D000017 ORTHO05D000013 1.3e-08 63.9 77 40.3
Oeu059246.1 Olea europaea HOM05D012404 ORTHO05D002765 1.3e-08 63.9 105 33.3
Nitab4.5_0000814g0120 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.7e-08 63.5 86 36.0
CANSAT80G0351 Cannabis sativa HOM05D000017 ORTHO05D000013 2.2e-08 63.2 60 53.3
Nitab4.5_0006644g0060 Nicotiana tabacum HOM05D007248 ORTHO05D000013 2.2e-08 63.2 114 35.1
Nitab4.5_0000709g0030 Nicotiana tabacum HOM05D000017 ORTHO05D002765 2.9e-08 62.8 68 42.6
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.9e-08 62.8 86 34.9
Nitab4.5_0005376g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.9e-08 62.8 72 40.3
Nitab4.5_0000073g0520 Nicotiana tabacum HOM05D009153 ORTHO05D002765 3.7e-08 62.4 84 35.7
CANSAT11G1061 Cannabis sativa HOM05D000017 ORTHO05D000013 4.9e-08 62.0 72 40.3
CANSAT78G2460 Cannabis sativa HOM05D000017 ORTHO05D000013 4.9e-08 62.0 79 48.1
Nitab4.5_0004496g0020 Nicotiana tabacum HOM05D007248 ORTHO05D000013 4.9e-08 62.0 80 38.8
Nitab4.5_0008296g0040 Nicotiana tabacum HOM05D009153 ORTHO05D011903 4.9e-08 62.0 89 33.7
Nitab4.5_0009030g0020 Nicotiana tabacum HOM05D007248 ORTHO05D000013 4.9e-08 62.0 64 43.8
CANSAT25G3667 Cannabis sativa HOM05D000017 ORTHO05D000013 6.4e-08 61.6 106 34.0
MBI14_g34390_MAGBIO Magnolia biondii HOM05D009229 ORTHO05D010914 6.4e-08 61.6 72 37.5
MBI16_g06792_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 6.4e-08 61.6 72 36.1
Nitab4.5_0000730g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.4e-08 61.6 93 37.6
CANSAT35G0042 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-07 60.8 46 54.3
CANSAT80G0369 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-07 60.8 100 34.0
Nitab4.5_0001140g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.1e-07 60.8 86 36.0
Nitab4.5_0011642g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.1e-07 60.8 86 34.9
MBI14_g11629_MAGBIO Magnolia biondii HOM05D009229 ORTHO05D010914 1.4e-07 60.5 72 37.5
Nitab4.5_0003730g0050 Nicotiana tabacum HOM05D000017 ORTHO05D002765 1.4e-07 60.5 68 41.2
Nitab4.5_0008756g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.4e-07 60.5 75 44.0
Oeu009493.1 Olea europaea HOM05D012404 ORTHO05D002765 1.4e-07 60.5 89 34.8
Sed0022463 Sechium edule HOM05D000017 ORTHO05D000013 1.4e-07 60.5 91 35.2
CANSAT25G2383 Cannabis sativa HOM05D000017 ORTHO05D000013 1.9e-07 60.1 132 30.3
ClCG01G015130 Citrullus lanatus HOM05D000017 ORTHO05D000013 1.9e-07 60.1 68 39.7
CsaV3_6G041240 Cucumis sativus L. HOM05D000017 ORTHO05D000013 1.9e-07 60.1 68 41.2
Nitab4.5_0000890g0220 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.9e-07 60.1 102 37.3
Nitab4.5_0001947g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.4e-07 59.7 92 35.9
Nitab4.5_0004449g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.4e-07 59.7 86 34.9
CANSAT78G0589 Cannabis sativa HOM05D000017 ORTHO05D000013 3.2e-07 59.3 139 31.7
Nitab4.5_0002534g0090 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.2e-07 59.3 127 29.1
Nitab4.5_0010618g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000013 3.2e-07 59.3 80 37.5
TAR299G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 3.2e-07 59.3 55 49.1
CANSAT80G0510 Cannabis sativa HOM05D000017 ORTHO05D000013 4.1e-07 58.9 59 45.8
CANSAT80G1128 Cannabis sativa HOM05D000017 ORTHO05D000013 4.1e-07 58.9 59 45.8
Nitab4.5_0002297g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.1e-07 58.9 102 34.3
MD10G1261100 Malus domestica HOM05D000017 ORTHO05D000013 5.4e-07 58.5 72 31.9
CANSAT01G2012 Cannabis sativa HOM05D000017 ORTHO05D021215 7.1e-07 58.2 74 39.2
CANSAT11G0629 Cannabis sativa HOM05D000017 ORTHO05D000013 7.1e-07 58.2 72 38.9
Nitab4.5_0000027g0260 Nicotiana tabacum HOM05D009153 ORTHO05D000013 7.1e-07 58.2 73 37.0
Nitab4.5_0000095g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000013 7.1e-07 58.2 80 38.8
Nitab4.5_0000904g0120 Nicotiana tabacum HOM05D009153 ORTHO05D011903 7.1e-07 58.2 70 37.1
Nitab4.5_0008752g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.1e-07 58.2 77 37.7
Nitab4.5_0013575g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.1e-07 58.2 68 38.2
CANSAT21G1850 Cannabis sativa HOM05D000017 ORTHO05D000013 9.2e-07 57.8 73 39.7
Nitab4.5_0003934g0100 Nicotiana tabacum HOM05D008401 ORTHO05D002765 9.2e-07 57.8 96 34.4
Oeu044754.1 Olea europaea HOM05D000017 ORTHO05D000013 9.2e-07 57.8 72 37.5
ATR0915G001 Amborella trichopoda HOM05D000017 ORTHO05D000013 1.6e-06 57.0 72 38.9
CANSAT11G0295 Cannabis sativa HOM05D000017 ORTHO05D000013 1.6e-06 57.0 72 38.9
MBI12_g39871_MAGBIO Magnolia biondii HOM05D009229 ORTHO05D010914 1.6e-06 57.0 93 34.4
Nitab4.5_0003767g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.6e-06 57.0 94 36.2
Oeu018449.1 Olea europaea HOM05D000017 ORTHO05D000013 1.6e-06 57.0 55 47.3
Oeu037740.1 Olea europaea HOM05D000017 ORTHO05D000013 1.6e-06 57.0 55 47.3
Nitab4.5_0005719g0040 Nicotiana tabacum HOM05D024446 ORTHO05D000013 2.1e-06 56.6 86 33.7
Oeu064469.1 Olea europaea HOM05D000017 ORTHO05D000013 2.7e-06 56.2 126 30.2
Sopen08g005870 Solanum pennellii HOM05D000017 ORTHO05D000013 2.7e-06 56.2 80 31.2
Oeu010167.1 Olea europaea HOM05D000017 ORTHO05D000013 3.5e-06 55.8 108 28.7
Atru.chr1.3834 Acer truncatum HOM05D000017 ORTHO05D000013 4.6e-06 55.5 71 35.2
MBI05_g12020_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 4.6e-06 55.5 71 33.8
Nitab4.5_0001062g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.6e-06 55.5 55 40.0
Atru.chr7.529 Acer truncatum HOM05D000017 ORTHO05D000013 6.0e-06 55.1 86 30.2
MBI05_g40421_MAGBIO Magnolia biondii HOM05D009229 ORTHO05D010914 7.8e-06 54.7 72 34.7
Os01g0540400 Oryza sativa ssp. japonica HOM05D034435 ORTHO05D049841 7.8e-06 54.7 115 30.4


User provided reference genes

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