Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G2673 Cannabis sativa HOM05D007522 ORTHO05D009518 2.9e-150 535.4 309 100.0
Duzib187G1360 Durio zibethinus HOM05D007522 ORTHO05D009518 3.4e-58 229.6 202 65.8
QL12p031480 Quercus lobata HOM05D007522 ORTHO05D009518 7.5e-58 228.4 202 65.3
Gohir.D13G209500 Gossypium hirsutum HOM05D007522 ORTHO05D009518 1.3e-57 227.6 202 64.9
Gorai.013G238600 Gossypium raimondii HOM05D007522 ORTHO05D009518 1.7e-57 227.3 202 64.9
Gohir.A13G204200 Gossypium hirsutum HOM05D007522 ORTHO05D009518 1.1e-56 224.6 202 64.9
COL.COLO4_24044 Corchorus olitorius HOM05D007522 ORTHO05D009518 2.4e-56 223.4 202 64.4
TPR.G34679 Trifolium pratense HOM05D007522 ORTHO05D009518 4.1e-56 222.6 188 64.9
Prupe.1G467900 Prunus persica HOM05D007522 ORTHO05D009518 9.1e-56 221.5 202 64.4
FAN24G0147 Fragaria x ananassa HOM05D007522 ORTHO05D009518 4.5e-55 219.2 202 60.9
FAN15G2839 Fragaria x ananassa HOM05D007522 ORTHO05D009518 1.0e-54 218.0 202 60.9
FvH4_2g30000 Fragaria vesca HOM05D007522 ORTHO05D009518 2.2e-54 216.9 202 60.4
Medtr3g108530 Medicago truncatula HOM05D007522 ORTHO05D009518 2.2e-54 216.9 197 60.4
GSVIVG01035795001 Vitis vinifera HOM05D007522 ORTHO05D009518 3.8e-54 216.1 195 62.1
arahy.Tifrunner.gnm1.ann1.EE81AI Arachis hypogaea HOM05D007522 ORTHO05D009518 1.5e-53 214.2 188 62.8
RcHm_v2.0_Chr6g0312911 Rosa chinensis HOM05D007522 ORTHO05D009518 1.5e-53 214.2 214 57.9
arahy.Tifrunner.gnm1.ann1.J4BCXN Arachis hypogaea HOM05D007522 ORTHO05D009518 3.2e-53 213.0 188 62.2
Atru.chr7.2341 Acer truncatum HOM05D007522 ORTHO05D009518 4.2e-53 212.6 196 62.8
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 4.2e-53 212.6 188 61.2
Ciclev10009234m.g Citrus clementina HOM05D007522 ORTHO05D009518 1.2e-52 211.1 202 60.9
CiPaw.07G218500 Carya illinoinensis HOM05D007522 ORTHO05D009518 6.1e-52 208.8 202 61.9
MD15G1116400 Malus domestica HOM05D007522 ORTHO05D009518 6.1e-52 208.8 202 60.4
Manes.03G065616 Manihot esculenta HOM05D007522 ORTHO05D009518 6.1e-52 208.8 188 62.8
Sabra06G0193900 Salix brachista HOM05D007522 ORTHO05D009518 3.0e-51 206.5 208 56.2
Phvul.009G097000 Phaseolus vulgaris HOM05D007522 ORTHO05D009518 4.0e-51 206.1 194 59.3
Actinidia13430 Actinidia chinensis HOM05D007522 ORTHO05D009518 5.2e-51 205.7 190 60.5
VMungo1309G1471 Vigna mungo HOM05D007522 ORTHO05D009518 6.8e-51 205.3 200 57.0
Potri.006G247900 Populus trichocarpa HOM05D007522 ORTHO05D009518 2.0e-50 203.8 188 61.7
Lalb_Chr08g0243841 Lupinus albus HOM05D007522 ORTHO05D009518 2.6e-50 203.4 195 59.0
Lj1g0002015 Lotus japonicus HOM05D007522 ORTHO05D009518 5.7e-50 202.2 188 60.1
Thecc.09G145600 Theobroma cacao HOM05D007522 ORTHO05D009518 9.8e-50 201.4 183 65.0
Glyma.06G072500 Glycine max HOM05D007522 ORTHO05D009518 1.1e-48 198.0 202 55.4
Eucgr.C02839 Eucalyptus grandis HOM05D007522 ORTHO05D009518 2.4e-48 196.8 202 55.4
Eucgr.C02850 Eucalyptus grandis HOM05D007522 ORTHO05D009518 3.1e-48 196.4 207 54.6
TAR383G0977 Trochodendron aralioides HOM05D007522 ORTHO05D009518 4.1e-48 196.1 188 61.7
CSS0007980 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 5.9e-47 192.2 202 56.9
Sed0015375 Sechium edule HOM05D007522 ORTHO05D009518 7.7e-47 191.8 196 56.1
Peaxi162Scf00267g00097 Petunia axillaris HOM05D007522 ORTHO05D009518 1.0e-46 191.4 186 59.7
MELO3C011219.2 Cucumis melo HOM05D007522 ORTHO05D009518 1.7e-46 190.7 202 55.0
FAN27G1610 Fragaria x ananassa HOM05D007522 ORTHO05D009518 6.6e-46 188.7 175 61.7
Solyc06g011403.1 Solanum lycopersicum HOM05D007522 ORTHO05D009518 1.1e-45 188.0 186 56.5
CsaV3_2G031690 Cucumis sativus L. HOM05D007522 ORTHO05D009518 2.5e-45 186.8 196 55.1
Sopen06g006080 Solanum pennellii HOM05D007522 ORTHO05D009518 2.5e-45 186.8 186 56.5
MSTRG.25867 Avicennia marina HOM05D007522 ORTHO05D009518 4.3e-45 186.0 195 54.4
Nn8g39310 Nelumbo nucifera HOM05D007522 ORTHO05D009518 5.6e-45 185.7 205 54.6
Oeu014660.1 Olea europaea HOM05D007522 ORTHO05D009518 7.3e-45 185.3 188 57.4
C01p06400 Brassica napus HOM05D007522 ORTHO05D009518 9.5e-45 184.9 202 54.0
BolC1t00636H Brassica oleracea HOM05D007522 ORTHO05D009518 9.5e-45 184.9 202 54.0
BraA01t00551Z Brassica rapa HOM05D007522 ORTHO05D009518 9.5e-45 184.9 201 54.2
BcaC09g52047 Brassica carinata HOM05D007522 ORTHO05D009518 1.6e-44 184.1 202 53.5
Thhalv10025779m.g Eutrema salsugineum HOM05D007522 ORTHO05D009518 1.6e-44 184.1 202 53.5
Carub.0007s0799 Capsella rubella HOM05D007522 ORTHO05D009518 3.6e-44 183.0 202 54.5
Aa31LG4G11730 Aethionema arabicum HOM05D007522 ORTHO05D009518 4.7e-44 182.6 202 53.5
AL7G19200 Arabidopsis lyrata HOM05D007522 ORTHO05D009518 4.7e-44 182.6 199 54.3
PGR044G0714 Punica granatum HOM05D007522 ORTHO05D009518 4.7e-44 182.6 193 52.8
Sp7g30340 Schrenkiella parvula HOM05D007522 ORTHO05D009518 4.7e-44 182.6 202 54.0
HanXRQChr13g0402121 Helianthus annuus HOM05D007522 ORTHO05D009518 1.0e-43 181.4 201 52.2
Migut.A00284 Erythranthe guttata HOM05D007522 ORTHO05D009518 1.8e-43 180.6 202 54.5
A01p05830 Brassica napus HOM05D007522 ORTHO05D009518 2.3e-43 180.3 201 53.2
AT4G32560 Arabidopsis thaliana HOM05D007522 ORTHO05D009518 1.5e-42 177.6 202 51.5
PSO063G3677 Papaver somniferum HOM05D007522 ORTHO05D009518 2.0e-42 177.2 207 53.1
PSO782G1743 Papaver somniferum HOM05D007522 ORTHO05D009518 2.0e-42 177.2 193 54.4
CARHR240530 Cardamine hirsuta HOM05D007522 ORTHO05D009518 3.4e-42 176.4 202 52.5
Cc11_g01290 Coffea canephora HOM05D007522 ORTHO05D009518 4.4e-42 176.0 228 47.8
Aqoxy2G01954 Aquilegia oxysepala HOM05D007522 ORTHO05D009518 1.7e-41 174.1 157 62.4
Eucgr.C02854 Eucalyptus grandis HOM05D007522 ORTHO05D009518 6.4e-41 172.2 161 61.5
THA.LOC104819887 Tarenaya hassleriana HOM05D007522 ORTHO05D009518 2.0e-39 167.2 230 48.3
Eucgr.C02843 Eucalyptus grandis HOM05D007522 ORTHO05D009518 4.6e-39 166.0 161 59.6
Psat0s1782g0120 Pisum sativum HOM05D007522 ORTHO05D009518 4.6e-39 166.0 147 62.6
Eucgr.L02345 Eucalyptus grandis HOM05D007522 ORTHO05D009518 7.8e-39 165.2 161 60.2
ECA233G0736 Erigeron canadensis HOM05D007522 ORTHO05D009518 1.7e-38 164.1 201 51.2
Lsat_1_v5_gn_6_22860 Lactuca sativa HOM05D007522 ORTHO05D009518 6.6e-38 162.2 157 55.4
vmacro11126 Vaccinium macrocarpon HOM05D007522 ORTHO05D009518 2.5e-37 160.2 283 40.6
Cpa.g.sc91.26 Carica papaya HOM05D007522 ORTHO05D009518 5.6e-37 159.1 195 50.3
Pp3c10_19840 Physcomitrium patens HOM05D007522 ORTHO05D009518 1.0e-35 154.8 180 49.4
EL10Ac2g02553 Beta vulgaris HOM05D007522 ORTHO05D009518 1.4e-35 154.5 188 48.4
AUR62032367 Chenopodium quinoa HOM05D007522 ORTHO05D009518 1.4e-35 154.5 188 48.4
Rhsim02G0189000 Rhododendron simsii HOM05D007522 ORTHO05D009518 3.1e-35 153.3 147 60.5
ATR0083G062 Amborella trichopoda HOM05D007522 ORTHO05D009518 3.4e-34 149.8 177 46.3
CDE02G2364 Ceratophyllum demersum HOM05D007522 ORTHO05D009518 6.4e-33 145.6 145 54.5
Mapoly0015s0053 Marchantia polymorpha HOM05D007522 ORTHO05D009518 7.0e-32 142.1 188 42.0
AagrBONN_evm.TU.Sc2ySwM_117.2977 Anthoceros agrestis HOM05D007522 ORTHO05D009518 2.7e-31 140.2 186 43.0
Dinv30202 Davidia involucrata HOM05D007522 ORTHO05D009518 6.6e-30 135.6 134 59.0
HPP92_008699 Vanilla planifolia HOM05D002348 ORTHO05D002512 7.3e-29 132.1 161 47.2
SalBow8G3415 Salvia bowleyana HOM05D007522 ORTHO05D009518 1.1e-27 128.3 107 63.6
Ah.10g025820 Amaranthus hybridus HOM05D007522 ORTHO05D009518 4.4e-26 122.9 142 49.3
MD08G1138500 Malus domestica HOM05D007522 ORTHO05D009518 2.3e-22 110.5 82 72.0
CBR_g51241 Chara braunii HOM05D007522 ORTHO05D009518 1.6e-20 104.4 172 34.9
AUR62024852 Chenopodium quinoa HOM05D007522 ORTHO05D009518 3.6e-20 103.2 112 56.2
Haze_21613 Corylus avellana HOM05D007522 ORTHO05D009518 1.4e-19 101.3 175 44.6
CBR_g75925 Chara braunii HOM05D007522 ORTHO05D009518 1.6e-15 87.8 127 37.0
MD08G1138600 Malus domestica HOM05D007522 ORTHO05D009518 6.9e-11 72.4 90 48.9
Cfa021321 Carpinus fangiana HOM05D007522 ORTHO05D009518 2.6e-10 70.5 79 55.7
Glyma.04G070700 Glycine max HOM05D007522 ORTHO05D009518 4.6e-07 59.7 86 41.9
Glyma.04G070800 Glycine max HOM05D007522 ORTHO05D009518 6.0e-07 59.3 79 41.8
SEGI_07807 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 6.0e-07 59.3 62 51.6


User provided reference genes

Program Settings