Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G2660 Cannabis sativa HOM05D003933 ORTHO05D004746 6.6e-218 760.4 372 100.0
CANSAT78G0638 Cannabis sativa HOM05D003933 ORTHO05D004746 8.2e-152 540.8 401 66.8
Prupe.1G348200 Prunus persica HOM05D003933 ORTHO05D004746 1.7e-141 506.5 401 62.3
Cfa008748 Carpinus fangiana HOM05D003933 ORTHO05D004746 2.2e-141 506.1 402 63.7
ClCG10G012050 Citrullus lanatus HOM05D003933 ORTHO05D004746 2.2e-141 506.1 400 63.0
RcHm_v2.0_Chr4g0446781 Rosa chinensis HOM05D003933 ORTHO05D004746 4.2e-140 501.9 402 62.7
MD13G1004400 Malus domestica HOM05D003933 ORTHO05D004746 7.2e-140 501.1 401 62.1
Thecc.02G159300 Theobroma cacao HOM05D003933 ORTHO05D004746 1.8e-138 496.5 396 61.1
FAN07G0849 Fragaria x ananassa HOM05D003933 ORTHO05D004746 2.0e-137 493.0 402 61.2
QL05p009967 Quercus lobata HOM05D003933 ORTHO05D004746 2.0e-137 493.0 401 61.6
FvH4_4g36990 Fragaria vesca HOM05D003933 ORTHO05D004746 3.3e-137 492.3 402 61.7
Atru.chr11.1157 Acer truncatum HOM05D003933 ORTHO05D004746 8.2e-136 487.6 399 61.7
CsaV3_3G031790 Cucumis sativus L. HOM05D003933 ORTHO05D004746 2.0e-134 483.0 402 60.9
Ciclev10031732m.g Citrus clementina HOM05D003933 ORTHO05D004746 7.7e-134 481.1 399 60.2
COL.COLO4_08591 Corchorus olitorius HOM05D003933 ORTHO05D004746 7.7e-134 481.1 396 59.8
Duzib132G1110 Durio zibethinus HOM05D003933 ORTHO05D004746 1.7e-133 479.9 396 61.1
Duzib277G0001 Durio zibethinus HOM05D003933 ORTHO05D004746 3.8e-133 478.8 396 61.1
Sed0001276 Sechium edule HOM05D003933 ORTHO05D004746 3.8e-133 478.8 394 60.9
PGR142G4240 Punica granatum HOM05D003933 ORTHO05D004746 6.5e-133 478.0 403 60.0
Potri.005G092000 Populus trichocarpa HOM05D003933 ORTHO05D004746 4.2e-132 475.3 401 59.6
Eucgr.J00872 Eucalyptus grandis HOM05D003933 ORTHO05D004746 9.4e-132 474.2 402 59.2
CSS0045284 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 8.0e-131 471.1 405 59.0
Aqoxy5G00269 Aquilegia oxysepala HOM05D003933 ORTHO05D004746 1.8e-130 469.9 402 58.7
Nitab4.5_0000569g0090 Nicotiana tabacum HOM05D003933 ORTHO05D004746 5.2e-130 468.4 401 58.6
MELO3C024011.2 Cucumis melo HOM05D003933 ORTHO05D004746 1.5e-129 466.8 396 59.6
Peaxi162Scf00081g01011 Petunia axillaris HOM05D003933 ORTHO05D004746 1.5e-129 466.8 397 59.4
CAN.G107.7 Capsicum annuum HOM05D003933 ORTHO05D004746 2.0e-129 466.5 402 58.2
Gohir.A13G060600 Gossypium hirsutum HOM05D003933 ORTHO05D004746 2.0e-129 466.5 395 58.7
Lalb_Chr10g0094951 Lupinus albus HOM05D003933 ORTHO05D004746 2.0e-129 466.5 400 58.0
Solyc12g088450.3 Solanum lycopersicum HOM05D003933 ORTHO05D004746 3.3e-129 465.7 401 57.9
Lj6A748G52 Lonicera japonica HOM05D003933 ORTHO05D004746 5.7e-129 464.9 396 58.8
Cc11_g08880 Coffea canephora HOM05D003933 ORTHO05D004746 9.7e-129 464.2 401 58.1
Duzib248G0690 Durio zibethinus HOM05D003933 ORTHO05D004746 1.3e-128 463.8 393 57.8
Gorai.013G069800 Gossypium raimondii HOM05D003933 ORTHO05D004746 1.7e-128 463.4 395 58.0
Nitab4.5_0003643g0030 Nicotiana tabacum HOM05D003933 ORTHO05D004746 1.7e-128 463.4 401 58.4
PGSC0003DMG402011550 Solanum tuberosum HOM05D003933 ORTHO05D004746 1.7e-128 463.4 401 57.9
TWI77G0671 Tripterygium wilfordii HOM05D003933 ORTHO05D004746 2.2e-128 463.0 403 59.1
Manes.09G017800 Manihot esculenta HOM05D003933 ORTHO05D004746 3.7e-128 462.2 399 59.4
Aa31LG3G18300 Aethionema arabicum HOM05D003933 ORTHO05D004746 4.8e-128 461.8 400 59.2
Gohir.D13G061300 Gossypium hirsutum HOM05D003933 ORTHO05D004746 1.8e-127 459.9 395 57.7
Manes.08G053300 Manihot esculenta HOM05D003933 ORTHO05D004746 2.4e-127 459.5 400 58.2
TAR629G2222 Trochodendron aralioides HOM05D003933 ORTHO05D004746 9.1e-127 457.6 405 57.0
Phvul.003G004900 Phaseolus vulgaris HOM05D003933 ORTHO05D004746 1.2e-126 457.2 399 57.6
vmacro10631 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 1.2e-126 457.2 444 54.7
Rhsim09G0099700 Rhododendron simsii HOM05D003933 ORTHO05D004746 2.0e-126 456.4 401 58.1
Glyma.09G282800 Glycine max HOM05D003933 ORTHO05D004746 2.7e-126 456.1 400 57.8
MSTRG.890 Avicennia marina HOM05D003933 ORTHO05D004746 3.5e-126 455.7 416 55.5
DCAR_007284 Daucus carota HOM05D003933 ORTHO05D004746 3.5e-126 455.7 401 57.4
Actinidia14952 Actinidia chinensis HOM05D003933 ORTHO05D004746 5.9e-126 454.9 405 56.5
CAN.G1054.19 Capsicum annuum HOM05D003933 ORTHO05D004746 5.9e-126 454.9 394 58.1
Migut.L00761 Erythranthe guttata HOM05D003933 ORTHO05D004746 1.0e-125 454.1 407 56.8
SGA_v2.0_scaffold38G15064 Striga asiatica HOM05D003933 ORTHO05D004746 1.0e-125 454.1 404 56.7
Haze_11764 Corylus avellana HOM05D003933 ORTHO05D004746 1.3e-125 453.8 422 56.9
HanXRQChr12g0377651 Helianthus annuus HOM05D003933 ORTHO05D004746 1.3e-125 453.8 399 56.4
Psat6g135760 Pisum sativum HOM05D003933 ORTHO05D004746 2.2e-125 453.0 403 56.8
CSS0043425 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 5.0e-125 451.8 402 57.5
Hund08600 Selenicereus undatus HOM05D003933 ORTHO05D004746 5.0e-125 451.8 406 56.7
ECA234G4145 Erigeron canadensis HOM05D003933 ORTHO05D004746 6.5e-125 451.4 399 56.1
THA.LOC104800863 Tarenaya hassleriana HOM05D003933 ORTHO05D004746 8.5e-125 451.1 403 57.3
PSO063G7666 Papaver somniferum HOM05D003933 ORTHO05D004746 1.1e-124 450.7 403 56.8
AUR62032977 Chenopodium quinoa HOM05D003933 ORTHO05D004746 2.5e-124 449.5 416 54.8
Solyc04g078160.4 Solanum lycopersicum HOM05D003933 ORTHO05D004746 3.2e-124 449.1 389 58.4
Nitab4.5_0000934g0120 Nicotiana tabacum HOM05D003933 ORTHO05D004746 4.2e-124 448.7 400 57.8
PGSC0003DMG400021516 Solanum tuberosum HOM05D003933 ORTHO05D004746 1.2e-123 447.2 388 58.2
arahy.Tifrunner.gnm1.ann1.2XRJ77 Arachis hypogaea HOM05D003933 ORTHO05D004746 1.6e-123 446.8 403 56.6
EL10Ac9g22955 Beta vulgaris HOM05D003933 ORTHO05D004746 1.6e-123 446.8 408 55.9
TPR.G29790 Trifolium pratense HOM05D003933 ORTHO05D004746 1.6e-123 446.8 399 57.4
arahy.Tifrunner.gnm1.ann1.J5HH0A Arachis hypogaea HOM05D003933 ORTHO05D004746 2.1e-123 446.4 403 56.6
vmacro10628 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 2.1e-123 446.4 446 53.4
Lj2g0026122 Lotus japonicus HOM05D003933 ORTHO05D004746 3.6e-123 445.7 400 56.2
Lsat_1_v5_gn_4_15060 Lactuca sativa HOM05D003933 ORTHO05D004746 1.0e-122 444.1 413 55.9
SalBow8G0218 Salvia bowleyana HOM05D003933 ORTHO05D004746 1.0e-122 444.1 404 55.4
PSO782G2797 Papaver somniferum HOM05D003933 ORTHO05D004746 2.3e-122 443.0 403 55.8
VMungo0251G2024 Vigna mungo HOM05D003933 ORTHO05D004746 7.5e-121 438.0 421 54.6
Ca_07914_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 1.7e-120 436.8 394 56.9
Glyma.11G100000 Glycine max HOM05D003933 ORTHO05D004746 2.8e-120 436.0 389 58.6
Sopen04g031790 Solanum pennellii HOM05D003933 ORTHO05D004746 4.8e-120 435.3 398 56.5
Medtr1g037570 Medicago truncatula HOM05D003933 ORTHO05D004746 1.1e-119 434.1 400 55.0
Carub.0006s2098 Capsella rubella HOM05D003933 ORTHO05D004746 9.1e-119 431.0 398 56.3
Os02g0634600 Oryza sativa ssp. japonica HOM05D003933 ORTHO05D004746 1.2e-118 430.6 406 56.2
AL6G34400 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 1.6e-118 430.3 398 55.5
AT5G23200 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 4.5e-118 428.7 399 55.1
Cpa.g.sc0.130 Carica papaya HOM05D003933 ORTHO05D004746 4.5e-118 428.7 478 49.8
Lj3g0001561 Lotus japonicus HOM05D003933 ORTHO05D004746 4.5e-118 428.7 394 55.6
Nitab4.5_0004707g0060 Nicotiana tabacum HOM05D003933 ORTHO05D004746 5.9e-118 428.3 389 57.6
arahy.Tifrunner.gnm1.ann1.3AB2AC Arachis hypogaea HOM05D003933 ORTHO05D004746 2.2e-117 426.4 380 58.4
CARHR190340 Cardamine hirsuta HOM05D003933 ORTHO05D004746 2.2e-117 426.4 403 55.3
Lj3g0018867 Lotus japonicus HOM05D003933 ORTHO05D004746 5.0e-117 425.2 394 55.8
Ca_19016_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 6.5e-117 424.9 374 56.4
arahy.Tifrunner.gnm1.ann1.E3G1QY Arachis hypogaea HOM05D003933 ORTHO05D004746 1.5e-116 423.7 380 58.7
Thhalv10004353m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 1.9e-116 423.3 402 55.2
Medtr4g075120 Medicago truncatula HOM05D003933 ORTHO05D004746 3.6e-115 419.1 378 58.5
Gorai.005G210900 Gossypium raimondii HOM05D003933 ORTHO05D004746 8.0e-115 417.9 373 57.4
FAN12G2057 Fragaria x ananassa HOM05D003933 ORTHO05D004746 1.0e-114 417.5 402 55.5
Gohir.A03G165000 Gossypium hirsutum HOM05D003933 ORTHO05D004746 1.4e-114 417.2 380 56.3
Gohir.D02G188200 Gossypium hirsutum HOM05D003933 ORTHO05D004746 2.3e-114 416.4 373 57.4
BraA03t13757Z Brassica rapa HOM05D003933 ORTHO05D004746 3.0e-114 416.0 403 53.6
A03p46330 Brassica napus HOM05D003933 ORTHO05D004746 2.0e-113 413.3 403 53.3
Sp2g23940 Schrenkiella parvula HOM05D003933 ORTHO05D004746 4.4e-113 412.1 402 53.2
Thhalv10013838m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 5.7e-113 411.8 386 56.0
C07p44350 Brassica napus HOM05D003933 ORTHO05D004746 7.5e-113 411.4 403 53.6
BolC7t44956H Brassica oleracea HOM05D003933 ORTHO05D004746 7.5e-113 411.4 403 53.6
Hma1.2p1_0933F.1_g238310 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 2.4e-111 406.4 433 51.3
Hma1.2p1_2428F.1_g321995 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 2.4e-111 406.4 433 51.3
AL6G18670 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 5.4e-111 405.2 390 54.4
Peaxi162Scf00160g00123 Petunia axillaris HOM05D003933 ORTHO05D004746 1.2e-110 404.1 361 57.9
CiPaw.06G061200 Carya illinoinensis HOM05D003933 ORTHO05D004746 2.0e-110 403.3 341 59.5
DCAR_030211 Daucus carota HOM05D003933 ORTHO05D004746 4.5e-110 402.1 361 56.0
VMungo1127G0010 Vigna mungo HOM05D003933 ORTHO05D004746 2.9e-109 399.4 373 56.3
BcaB08g37269 Brassica carinata HOM05D003933 ORTHO05D004746 8.6e-109 397.9 389 53.5
Sp6g34690 Schrenkiella parvula HOM05D003933 ORTHO05D004746 1.2e-107 394.0 378 54.0
AT5G08270 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 2.1e-107 393.3 386 53.6
ATR0618G423 Amborella trichopoda HOM05D003933 ORTHO05D004746 8.0e-107 391.3 401 51.6
Lalb_Chr19g0139431 Lupinus albus HOM05D003933 ORTHO05D004746 4.0e-106 389.0 386 52.6
C09p68670 Brassica napus HOM05D003933 ORTHO05D004746 8.3e-104 381.3 370 53.5
BraA10t44888Z Brassica rapa HOM05D003933 ORTHO05D004746 3.2e-103 379.4 372 53.5
A10p28410 Brassica napus HOM05D003933 ORTHO05D004746 3.5e-102 375.9 370 53.2
BolC9t59613H Brassica oleracea HOM05D003933 ORTHO05D004746 3.5e-102 375.9 370 53.5
unitig_26.g10014 Utricularia gibba HOM05D003933 ORTHO05D004746 2.3e-101 373.2 383 50.1
Carub.0006s0715 Capsella rubella HOM05D003933 ORTHO05D004746 6.6e-101 371.7 348 54.9
Potri.005G092100 Populus trichocarpa HOM05D003933 ORTHO05D004746 1.4e-98 364.0 377 50.7
Sabra05G0076300 Salix brachista HOM05D003933 ORTHO05D004746 8.9e-98 361.3 332 54.5
Lj3g0003114 Lotus japonicus HOM05D003933 ORTHO05D004746 1.3e-96 357.5 355 53.0
Lj3g0021014 Lotus japonicus HOM05D003933 ORTHO05D004746 1.3e-96 357.5 355 53.0
Lj3g0017683 Lotus japonicus HOM05D003933 ORTHO05D004746 2.9e-96 356.3 355 52.7
MBI06_g23608_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 1.9e-95 353.6 361 51.2
TPR.G25000 Trifolium pratense HOM05D003933 ORTHO05D004746 1.9e-95 353.6 333 55.6
HPP92_008573 Vanilla planifolia HOM05D003933 ORTHO05D004746 1.0e-93 347.8 326 54.6
Ca_20843_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 9.8e-89 331.3 317 52.7
MBI06_g32507_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 1.3e-88 330.9 314 52.5
Psat7g177760 Pisum sativum HOM05D003933 ORTHO05D004746 1.7e-88 330.5 314 55.1
Dinv17619 Davidia involucrata HOM05D003933 ORTHO05D004746 9.2e-87 324.7 263 63.1
GSVIVG01026245001 Vitis vinifera HOM05D003933 ORTHO05D004746 1.0e-85 321.2 387 47.8
Zm00001eb248160 Zea mays HOM05D003933 ORTHO05D004746 4.0e-82 309.3 317 51.7
Sopen12g030430 Solanum pennellii HOM05D003933 ORTHO05D004746 8.9e-82 308.1 248 57.7
FAN17G2963 Fragaria x ananassa HOM05D003933 ORTHO05D004746 3.4e-81 306.2 271 57.6
CARHR204870 Cardamine hirsuta HOM05D003933 ORTHO05D004746 2.4e-79 300.1 252 60.7
SEGI_04055 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 6.0e-78 295.4 365 44.1
CSS0006186 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 3.0e-77 293.1 261 56.3
SMO364G0332 Selaginella moellendorffii HOM05D003933 ORTHO05D004746 1.9e-76 290.4 383 43.1
CSS0013970 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 7.3e-76 288.5 275 53.5
CSS0027256 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 9.9e-73 278.1 253 54.2
Mapoly0072s0109 Marchantia polymorpha HOM05D003933 ORTHO05D004746 9.9e-73 278.1 383 41.0
CSS0049411 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 8.4e-72 275.0 225 59.1
Pp3c10_5850 Physcomitrium patens HOM05D003933 ORTHO05D004746 1.4e-71 274.2 399 39.6
AagrBONN_evm.TU.Sc2ySwM_117.4016 Anthoceros agrestis HOM05D003933 ORTHO05D004746 4.2e-71 272.7 395 39.7
Sed0007936 Sechium edule HOM05D003933 ORTHO05D004746 9.6e-68 261.5 278 52.9
CDE08G0738 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 1.1e-66 258.1 234 53.8
MD16G1003200 Malus domestica HOM05D003933 ORTHO05D004746 2.1e-51 207.2 360 38.6
CBR_g6576 Chara braunii HOM05D003933 ORTHO05D004746 3.4e-49 199.9 443 32.7
Sc10g0005110 Simmondsia chinensis HOM05D003933 ORTHO05D004746 7.6e-49 198.7 192 52.1
PGSC0003DMG400011553 Solanum tuberosum HOM05D003933 ORTHO05D004746 1.8e-45 187.6 156 55.8
SHI31071 Sapria himalayana HOM05D003933 ORTHO05D004746 1.9e-39 167.5 338 35.5
Sc10g0005100 Simmondsia chinensis HOM05D003933 ORTHO05D004746 1.2e-33 148.3 119 64.7
Nn7g37760 Nelumbo nucifera HOM05D003933 ORTHO05D004746 7.7e-33 145.6 101 73.3
Oeu044350.1 Olea europaea HOM05D003933 ORTHO05D004746 5.0e-32 142.9 130 60.0
CDE08G1244 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 1.4e-31 141.4 117 64.1
MCO06G263 Micromonas commoda HOM05D003933 ORTHO05D004746 7.2e-31 139.0 437 26.8
Cre02.g086076 Chlamydomonas reinhardtii HOM05D003933 ORTHO05D004746 7.7e-25 119.0 326 26.1
C06p10890 Brassica napus HOM05D003933 ORTHO05D004746 1.1e-23 115.2 258 30.6
C02p60970 Brassica napus HOM05D003933 ORTHO05D004746 1.4e-23 114.8 258 30.6
COL.COLO4_20883 Corchorus olitorius HOM05D003933 ORTHO05D004746 7.2e-23 112.5 90 57.8
BcaC03g18034 Brassica carinata HOM05D003933 ORTHO05D004746 1.3e-19 101.7 346 27.2
A02p41110 Brassica napus HOM05D003933 ORTHO05D004746 1.1e-18 98.6 68 66.2
Dinv17620 Davidia involucrata HOM05D003933 ORTHO05D028341 1.6e-17 94.7 67 64.2
CARHR204860 Cardamine hirsuta HOM05D003933 ORTHO05D004746 2.3e-13 80.9 63 63.5
SEGI_32331 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 2.0e-12 77.8 83 48.2
MBI06_g42297_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 5.7e-12 76.3 64 60.9
Psat7g177720 Pisum sativum HOM05D003933 ORTHO05D004746 2.0e-09 67.8 44 77.3
COL.COLO4_20881 Corchorus olitorius HOM05D003933 ORTHO05D004746 1.1e-07 62.0 41 73.2
BcaC03g13212 Brassica carinata HOM05D003933 ORTHO05D004746 1.6e-06 58.2 124 33.9
BolC2t12147H Brassica oleracea HOM05D003933 ORTHO05D028341 2.1e-06 57.8 58 50.0


User provided reference genes

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