Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G2634 Cannabis sativa HOM05D007659 ORTHO05D009227 7.6e-59 230.3 119 100.0
Dinv41341 Davidia involucrata HOM05D007659 ORTHO05D009227 4.6e-32 141.4 117 59.8
Rhsim01G0023600 Rhododendron simsii HOM05D007659 ORTHO05D009227 1.8e-31 139.4 103 67.0
QL02p094226 Quercus lobata HOM05D007659 ORTHO05D009227 2.3e-31 139.0 117 62.4
Haze_19128 Corylus avellana HOM05D007659 ORTHO05D009227 3.9e-31 138.3 119 58.8
RcHm_v2.0_Chr4g0405451 Rosa chinensis HOM05D007659 ORTHO05D009227 2.5e-30 135.6 119 61.3
Cfa019408 Carpinus fangiana HOM05D007659 ORTHO05D009227 9.6e-30 133.7 119 56.3
Haze_19136 Corylus avellana HOM05D007659 ORTHO05D009227 1.3e-29 133.3 100 61.0
Haze_19124 Corylus avellana HOM05D007659 ORTHO05D009227 2.8e-29 132.1 100 60.0
Haze_19129 Corylus avellana HOM05D007659 ORTHO05D009227 3.7e-29 131.7 100 60.0
Eucgr.L01549 Eucalyptus grandis HOM05D007659 ORTHO05D009227 1.1e-28 130.2 119 59.7
Eucgr.C02516 Eucalyptus grandis HOM05D007659 ORTHO05D009227 2.4e-28 129.0 119 59.7
FvH4_4g09760 Fragaria vesca HOM05D007659 ORTHO05D009227 2.4e-28 129.0 119 59.7
GSVIVG01023691001 Vitis vinifera HOM05D007659 ORTHO05D009227 2.4e-28 129.0 104 63.5
Prupe.1G101900 Prunus persica HOM05D007659 ORTHO05D009227 3.1e-28 128.6 115 56.5
Actinidia28561 Actinidia chinensis HOM05D007659 ORTHO05D009227 5.3e-28 127.9 106 67.0
Nn8g40114 Nelumbo nucifera HOM05D007659 ORTHO05D009227 5.3e-28 127.9 118 59.3
FAN07G1615 Fragaria x ananassa HOM05D007659 ORTHO05D009227 6.9e-28 127.5 119 59.7
Hma1.2p1_1084F.1_g255330 Hydrangea macrophylla HOM05D007659 ORTHO05D009227 6.9e-28 127.5 115 53.9
Sabra06G0137200 Salix brachista HOM05D007659 ORTHO05D009227 6.9e-28 127.5 119 55.5
Cc02_g28880 Coffea canephora HOM05D007659 ORTHO05D009227 2.6e-27 125.6 106 65.1
Cc00_g30920 Coffea canephora HOM05D007659 ORTHO05D009227 5.8e-27 124.4 104 65.4
vmacro13049 Vaccinium macrocarpon HOM05D007659 ORTHO05D009227 7.6e-27 124.0 131 51.9
Haze_19127 Corylus avellana HOM05D007659 ORTHO05D009227 1.0e-26 123.6 115 55.7
Haze_19137 Corylus avellana HOM05D007659 ORTHO05D009227 1.3e-26 123.2 109 56.9
Aqoxy7G03300 Aquilegia oxysepala HOM05D007659 ORTHO05D009227 1.7e-26 122.9 118 52.5
Hund07205 Selenicereus undatus HOM05D007659 ORTHO05D009227 2.2e-26 122.5 118 53.4
FAN22G0789 Fragaria x ananassa HOM05D007659 ORTHO05D009227 2.9e-26 122.1 119 58.0
Manes.06G031900 Manihot esculenta HOM05D007659 ORTHO05D009227 5.0e-26 121.3 118 53.4
VMungo1215G2964 Vigna mungo HOM05D007659 ORTHO05D009227 5.0e-26 121.3 97 58.8
TWI63G1302 Tripterygium wilfordii HOM05D007659 ORTHO05D009227 1.1e-25 120.2 110 51.8
MD12G1196500 Malus domestica HOM05D007659 ORTHO05D009227 1.9e-25 119.4 126 53.2
Peaxi162Scf00038g00725 Petunia axillaris HOM05D007659 ORTHO05D009227 1.9e-25 119.4 122 53.3
Phvul.003G153300 Phaseolus vulgaris HOM05D007659 ORTHO05D009227 1.9e-25 119.4 94 57.4
arahy.Tifrunner.gnm1.ann1.FWLQ6H Arachis hypogaea HOM05D007659 ORTHO05D009227 5.5e-25 117.9 120 51.7
arahy.Tifrunner.gnm1.ann1.KUG4GU Arachis hypogaea HOM05D007659 ORTHO05D009227 5.5e-25 117.9 120 51.7
Duzib187G1272 Durio zibethinus HOM05D007659 ORTHO05D009227 9.3e-25 117.1 118 55.1
Thecc.09G154300 Theobroma cacao HOM05D007659 ORTHO05D009227 2.7e-24 115.5 108 55.6
Haze_27708 Corylus avellana HOM05D007659 ORTHO05D009227 6.1e-24 114.4 88 59.1
Lj4g0008058 Lotus japonicus HOM05D007659 ORTHO05D009227 6.1e-24 114.4 94 58.5
EL10Ac4g09658 Beta vulgaris HOM05D007659 ORTHO05D009227 7.9e-24 114.0 119 51.3
PGR102G1560 Punica granatum HOM05D007659 ORTHO05D009227 1.0e-23 113.6 105 56.2
Haze_19130 Corylus avellana HOM05D007659 ORTHO05D009227 1.3e-23 113.2 88 60.2
PGSC0003DMG400011214 Solanum tuberosum HOM05D007659 ORTHO05D009227 1.8e-23 112.8 94 58.5
Glyma.17G071000 Glycine max HOM05D007659 ORTHO05D009227 2.3e-23 112.5 99 58.6
Solyc07g006040.3 Solanum lycopersicum HOM05D007659 ORTHO05D009227 6.7e-23 110.9 96 57.3
A03p60380 Brassica napus HOM05D007659 ORTHO05D009227 1.1e-22 110.2 93 55.9
BraA03t15078Z Brassica rapa HOM05D007659 ORTHO05D009227 1.1e-22 110.2 93 55.9
Gohir.D05G342500 Gossypium hirsutum HOM05D007659 ORTHO05D009227 1.1e-22 110.2 98 57.1
Gorai.009G368800 Gossypium raimondii HOM05D007659 ORTHO05D009227 1.9e-22 109.4 99 58.6
Gohir.A04G040700 Gossypium hirsutum HOM05D007659 ORTHO05D009227 3.3e-22 108.6 96 56.2
CiPaw.15G164100 Carya illinoinensis HOM05D007659 ORTHO05D009227 7.4e-22 107.5 102 54.9
Ciclev10009916m.g Citrus clementina HOM05D007659 ORTHO05D009227 1.3e-21 106.7 102 53.9
AT4G30845 Arabidopsis thaliana HOM05D007659 ORTHO05D009227 2.8e-21 105.5 83 60.2
Lsat_1_v5_gn_7_50920 Lactuca sativa HOM05D007659 ORTHO05D009227 3.7e-21 105.1 96 58.3
SalBow6G0978 Salvia bowleyana HOM05D007659 ORTHO05D009227 3.7e-21 105.1 81 66.7
Ah.06g188510 Amaranthus hybridus HOM05D000987 ORTHO05D000831 8.2e-21 104.0 101 52.5
Lalb_Chr12g0198851 Lupinus albus HOM05D007659 ORTHO05D009227 8.2e-21 104.0 103 52.4
AL7G21270 Arabidopsis lyrata HOM05D007659 ORTHO05D009227 1.1e-20 103.6 85 55.3
MSTRG.6163 Avicennia marina HOM05D007659 ORTHO05D009227 1.1e-20 103.6 90 60.0
Carub.0007s0971 Capsella rubella HOM05D007659 ORTHO05D009227 1.1e-20 103.6 83 59.0
HanXRQChr03g0066011 Helianthus annuus HOM05D007659 ORTHO05D009227 1.1e-20 103.6 109 54.1
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 1.4e-20 103.2 82 58.5
Medtr4g130250 Medicago truncatula HOM05D007659 ORTHO05D009227 1.4e-20 103.2 91 52.7
BcaNung01556 Brassica carinata HOM05D007659 ORTHO05D009227 1.8e-20 102.8 93 53.8
Migut.J01394 Erythranthe guttata HOM05D007659 ORTHO05D009227 1.8e-20 102.8 82 64.6
Aa31LG2G19540 Aethionema arabicum HOM05D007659 ORTHO05D009227 2.4e-20 102.4 93 55.9
BcaNung02735 Brassica carinata HOM05D007659 ORTHO05D009227 4.1e-20 101.7 93 52.7
Sed0026034 Sechium edule HOM05D007659 ORTHO05D009227 5.3e-20 101.3 121 46.3
Ca_21156_v3 Cicer arietinum L. HOM05D007659 ORTHO05D009227 6.9e-20 100.9 91 52.7
Thhalv10026581m.g Eutrema salsugineum HOM05D007659 ORTHO05D009227 6.9e-20 100.9 91 54.9
C07p58250 Brassica napus HOM05D007659 ORTHO05D009227 9.0e-20 100.5 93 51.6
BolC7t46283H Brassica oleracea HOM05D007659 ORTHO05D009227 9.0e-20 100.5 93 51.6
Sc06g0005340 Simmondsia chinensis HOM05D007659 ORTHO05D009227 9.0e-20 100.5 105 52.4
MELO3C010198.2 Cucumis melo HOM05D007659 ORTHO05D009227 1.5e-19 99.8 122 50.0
Potri.006G180200 Populus trichocarpa HOM05D007659 ORTHO05D009227 1.5e-19 99.8 165 36.4
CsaV3_1G029210 Cucumis sativus L. HOM05D007659 ORTHO05D009227 2.0e-19 99.4 122 50.0
unitig_736.g22510 Utricularia gibba HOM05D007659 ORTHO05D009227 3.4e-19 98.6 78 60.3
THA.LOC104803555 Tarenaya hassleriana HOM05D007659 ORTHO05D009227 5.9e-19 97.8 116 46.6
CARHR238720 Cardamine hirsuta HOM05D007659 ORTHO05D009227 7.7e-19 97.4 85 56.5
ClCG06G012660 Citrullus lanatus HOM05D007659 ORTHO05D009227 1.7e-18 96.3 122 46.7
PSO782G2453 Papaver somniferum HOM05D007659 ORTHO05D009227 2.2e-18 95.9 62 74.2
Psat4g010200 Pisum sativum HOM05D007659 ORTHO05D009227 2.2e-18 95.9 90 50.0
PSO063G0802 Papaver somniferum HOM05D007659 ORTHO05D009227 5.0e-18 94.7 84 59.5
CDE04G0159 Ceratophyllum demersum HOM05D007659 ORTHO05D009227 2.5e-17 92.4 93 48.4
TPR.G24875 Trifolium pratense HOM05D007659 ORTHO05D009227 3.2e-17 92.0 68 61.8
HPP92_006698 Vanilla planifolia HOM05D007659 ORTHO05D009227 7.2e-17 90.9 79 55.7
ATR0111G019 Amborella trichopoda HOM05D007659 ORTHO05D009227 2.7e-16 89.0 94 50.0
Nitab4.5_0016001g0010 Nicotiana tabacum HOM05D007659 ORTHO05D009227 3.6e-16 88.6 58 67.2
MD04G1182900 Malus domestica HOM05D007659 ORTHO05D009227 2.0e-14 82.8 49 77.6
Zm00001eb400430 Zea mays HOM05D007659 ORTHO05D009227 1.1e-12 77.0 69 55.1
Os03g0210900 Oryza sativa ssp. japonica HOM05D007659 ORTHO05D009227 4.1e-12 75.1 57 59.6
Mapoly0004s0134 Marchantia polymorpha HOM05D007659 ORTHO05D009227 5.9e-11 71.2 88 43.2
CBR_g10976 Chara braunii HOM05D007659 ORTHO05D009227 1.9e-09 66.2 59 50.8
Pp3c17_8590 Physcomitrium patens HOM05D007659 ORTHO05D009227 2.5e-09 65.9 93 37.6
CSS0019882 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 3.2e-09 65.5 59 52.5
CSS0009256 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.2e-08 63.5 59 50.8
CSS0049883 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.6e-08 63.2 59 50.8
CSS0021661 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.7e-08 62.4 59 50.8
CSS0048580 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.7e-08 62.4 59 50.8
CSS0036875 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 4.7e-08 61.6 59 50.8
CSS0028860 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 5.1e-07 58.2 59 45.8
CSS0031893 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.1e-06 57.0 59 47.5
CSS0041034 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.6e-06 55.8 72 40.3


User provided reference genes

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