Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G2604 Cannabis sativa HOM05D005499 ORTHO05D006666 9.3e-66 253.4 132 100.0
CiPaw.03G051000 Carya illinoinensis HOM05D005499 ORTHO05D006666 2.9e-51 205.3 132 78.0
Haze_14820 Corylus avellana HOM05D005499 ORTHO05D006666 1.8e-48 196.1 132 74.2
Cfa007270 Carpinus fangiana HOM05D005499 ORTHO05D006666 3.0e-48 195.3 132 73.5
QL02p072772 Quercus lobata HOM05D005499 ORTHO05D006666 5.1e-48 194.5 131 74.8
Lalb_Chr02g0157891 Lupinus albus HOM05D005499 ORTHO05D006666 6.7e-48 194.1 132 75.0
Lalb_Chr21g0317581 Lupinus albus HOM05D005499 ORTHO05D006666 6.7e-48 194.1 132 75.0
Eucgr.J02294 Eucalyptus grandis HOM05D005499 ORTHO05D006666 1.1e-47 193.4 134 76.9
PSO478G5160 Papaver somniferum HOM05D005499 ORTHO05D006666 1.1e-47 193.4 133 75.9
Hma1.2p1_0279F.1_g112320 Hydrangea macrophylla HOM05D005499 ORTHO05D006666 1.5e-47 193.0 133 76.7
TPR.G3708 Trifolium pratense HOM05D005499 ORTHO05D006666 1.9e-47 192.6 132 74.2
VMungo0464G1619 Vigna mungo HOM05D005499 ORTHO05D006666 1.9e-47 192.6 132 73.5
Rhsim10G0010400 Rhododendron simsii HOM05D005499 ORTHO05D006666 2.5e-47 192.2 132 74.2
Glyma.19G077100 Glycine max HOM05D005499 ORTHO05D006666 3.3e-47 191.8 132 75.0
Dinv33378 Davidia involucrata HOM05D005499 ORTHO05D006666 4.3e-47 191.4 134 74.6
Psat1g031800 Pisum sativum HOM05D005499 ORTHO05D006666 5.6e-47 191.0 132 72.7
RcHm_v2.0_Chr3g0449841 Rosa chinensis HOM05D005499 ORTHO05D006666 5.6e-47 191.0 132 77.3
Atru.chr6.2492 Acer truncatum HOM05D005499 ORTHO05D006666 7.4e-47 190.7 134 74.6
arahy.Tifrunner.gnm1.ann1.C4BPDT Arachis hypogaea HOM05D005499 ORTHO05D006666 7.4e-47 190.7 132 73.5
Oeu003270.1 Olea europaea HOM05D005499 ORTHO05D006666 7.4e-47 190.7 133 75.2
TAR371G0544 Trochodendron aralioides HOM05D005499 ORTHO05D006666 9.6e-47 190.3 133 75.9
Glyma.05G073700 Glycine max HOM05D005499 ORTHO05D006666 1.6e-46 189.5 132 74.2
Potri.001G335600 Populus trichocarpa HOM05D005499 ORTHO05D006666 1.6e-46 189.5 132 74.2
Cpa.g.sc130.24 Carica papaya HOM05D005499 ORTHO05D006666 4.8e-46 188.0 134 74.6
Duzib264G0656 Durio zibethinus HOM05D005499 ORTHO05D006666 4.8e-46 188.0 134 76.9
Lj6g0007933 Lotus japonicus HOM05D005499 ORTHO05D006666 4.8e-46 188.0 132 72.7
arahy.Tifrunner.gnm1.ann1.JB8R4I Arachis hypogaea HOM05D005499 ORTHO05D006666 6.2e-46 187.6 132 72.7
Duzib187G1007 Durio zibethinus HOM05D005499 ORTHO05D006666 6.2e-46 187.6 134 76.1
Sed0019428 Sechium edule HOM05D005499 ORTHO05D006666 6.2e-46 187.6 133 73.7
Thecc.04G028500 Theobroma cacao HOM05D005499 ORTHO05D006666 6.2e-46 187.6 134 75.4
ClCG04G001400 Citrullus lanatus HOM05D005499 ORTHO05D006666 1.1e-45 186.8 135 75.6
CSS0020557 Camellia sinensis var. sinensis HOM05D005499 ORTHO05D006666 1.4e-45 186.4 134 72.4
Phvul.003G262000 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 1.4e-45 186.4 132 73.5
Ciclev10017154m.g Citrus clementina HOM05D005499 ORTHO05D006666 1.8e-45 186.0 134 74.6
PSO782G3924 Papaver somniferum HOM05D005499 ORTHO05D006666 2.4e-45 185.7 133 72.9
DCAR_011296 Daucus carota HOM05D005499 ORTHO05D006666 3.1e-45 185.3 132 71.2
Sabra16G0216600 Salix brachista HOM05D005499 ORTHO05D006666 3.1e-45 185.3 132 72.7
MBI11_g21381_MAGBIO Magnolia biondii HOM05D005499 ORTHO05D006666 5.3e-45 184.5 134 72.4
Phvul.003G138900 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 5.3e-45 184.5 132 72.7
Phvul.003G139152 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 5.3e-45 184.5 132 72.7
Prupe.6G125800 Prunus persica HOM05D005499 ORTHO05D006666 5.3e-45 184.5 134 71.6
COL.COLO4_29287 Corchorus olitorius HOM05D005499 ORTHO05D006666 6.9e-45 184.1 134 73.9
Medtr6g078300 Medicago truncatula HOM05D005499 ORTHO05D006666 6.9e-45 184.1 133 71.4
Migut.K01440 Erythranthe guttata HOM05D005499 ORTHO05D006666 1.5e-44 183.0 126 73.0
Gorai.012G089400 Gossypium raimondii HOM05D005499 ORTHO05D006666 1.5e-44 183.0 134 73.9
Solyc11g010180.2 Solanum lycopersicum HOM05D005499 ORTHO05D006666 1.5e-44 183.0 108 83.3
Sopen11g004960 Solanum pennellii HOM05D005499 ORTHO05D006666 1.5e-44 183.0 108 83.3
Nn4g24319 Nelumbo nucifera HOM05D005499 ORTHO05D006666 2.0e-44 182.6 134 72.4
TWI36G0940 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 3.4e-44 181.8 134 72.4
HanXRQChr01g0030421 Helianthus annuus HOM05D005499 ORTHO05D006666 5.8e-44 181.0 132 73.5
Manes.15G156800 Manihot esculenta HOM05D005499 ORTHO05D006666 5.8e-44 181.0 134 70.9
Gohir.D10G084868 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.3e-43 179.9 134 73.1
Aqoxy5G03538 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 1.7e-43 179.5 134 70.1
Ca_25364_v3 Cicer arietinum L. HOM05D005499 ORTHO05D006666 2.2e-43 179.1 133 69.9
Sc10g0004570 Simmondsia chinensis HOM05D005499 ORTHO05D006666 2.2e-43 179.1 133 67.7
Gorai.011G092800 Gossypium raimondii HOM05D005499 ORTHO05D006666 2.9e-43 178.7 134 72.4
FvH4_6g02050 Fragaria vesca HOM05D005499 ORTHO05D006666 3.8e-43 178.3 136 69.9
FAN05G0237 Fragaria x ananassa HOM05D005499 ORTHO05D006666 4.9e-43 177.9 136 69.9
FAN05G2282 Fragaria x ananassa HOM05D005499 ORTHO05D006666 4.9e-43 177.9 136 69.9
MELO3C008981.2 Cucumis melo HOM05D005499 ORTHO05D006666 6.5e-43 177.6 133 70.7
FAN05G1403 Fragaria x ananassa HOM05D005499 ORTHO05D006666 6.5e-43 177.6 136 69.9
FAN09G0379 Fragaria x ananassa HOM05D005499 ORTHO05D006666 6.5e-43 177.6 136 69.9
FAN14G4216 Fragaria x ananassa HOM05D005499 ORTHO05D006666 6.5e-43 177.6 136 69.9
ECA238G0236 Erigeron canadensis HOM05D005499 ORTHO05D006666 1.1e-42 176.8 132 71.2
TAR629G1334 Trochodendron aralioides HOM05D005499 ORTHO05D006666 1.1e-42 176.8 134 70.9
AUR62036750 Chenopodium quinoa HOM05D005499 ORTHO05D006666 1.4e-42 176.4 132 66.7
FAN05G4095 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.4e-42 176.4 136 69.1
Gohir.D04G079400 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.4e-42 176.4 134 71.6
Gohir.A10G160300 Gossypium hirsutum HOM05D005499 ORTHO05D006666 2.5e-42 175.6 105 84.8
MSTRG.3267 Avicennia marina HOM05D005499 ORTHO05D006666 4.2e-42 174.9 115 77.4
FAN14G1883 Fragaria x ananassa HOM05D005499 ORTHO05D006666 4.2e-42 174.9 137 70.8
CsaV3_4G031040 Cucumis sativus L. HOM05D005499 ORTHO05D006666 5.5e-42 174.5 131 71.0
PGSC0003DMG400016154 Solanum tuberosum HOM05D005499 ORTHO05D006666 5.5e-42 174.5 134 70.9
FAN14G2627 Fragaria x ananassa HOM05D005499 ORTHO05D006666 9.3e-42 173.7 137 70.8
TWI56G1275 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 9.3e-42 173.7 111 81.1
Cc10_g08070 Coffea canephora HOM05D005499 ORTHO05D006666 1.2e-41 173.3 134 72.4
FvH4_4g13440 Fragaria vesca HOM05D005499 ORTHO05D006666 1.2e-41 173.3 137 71.5
FAN12G0501 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.2e-41 173.3 137 71.5
Medtr4g073700 Medicago truncatula HOM05D005499 ORTHO05D006666 1.2e-41 173.3 132 70.5
AUR62013851 Chenopodium quinoa HOM05D005499 ORTHO05D006666 2.1e-41 172.6 132 65.2
Thhalv10014999m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 2.1e-41 172.6 133 70.7
Nitab4.5_0012484g0010 Nicotiana tabacum HOM05D005499 ORTHO05D006666 2.7e-41 172.2 133 69.2
Actinidia05936 Actinidia chinensis HOM05D005499 ORTHO05D006666 3.5e-41 171.8 132 70.5
Lsat_1_v5_gn_3_10761 Lactuca sativa HOM05D005499 ORTHO05D006666 3.5e-41 171.8 108 78.7
SalBow7G4317 Salvia bowleyana HOM05D005499 ORTHO05D006666 3.5e-41 171.8 128 69.5
unitig_32.g10669 Utricularia gibba HOM05D005499 ORTHO05D006666 4.6e-41 171.4 123 74.0
Nitab4.5_0000743g0030 Nicotiana tabacum HOM05D005499 ORTHO05D006666 6.0e-41 171.0 133 68.4
SGA_v2.0_scaffold47G17558 Striga asiatica HOM05D005499 ORTHO05D006666 6.0e-41 171.0 133 68.4
Aqoxy3G01444 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 1.0e-40 170.2 135 68.9
AL3G10400 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 1.3e-40 169.9 113 77.0
PGSC0003DMG400023637 Solanum tuberosum HOM05D005499 ORTHO05D006666 3.9e-40 168.3 133 66.2
Peaxi162Scf00016g00048 Petunia axillaris HOM05D005499 ORTHO05D006666 5.1e-40 167.9 103 81.6
Ah.00g000560 Amaranthus hybridus HOM05D005499 ORTHO05D006666 8.7e-40 167.2 132 64.4
CARHR199040 Cardamine hirsuta HOM05D005499 ORTHO05D006666 1.9e-39 166.0 133 70.7
Carub.0003s0032 Capsella rubella HOM05D005499 ORTHO05D006666 3.3e-39 165.2 113 74.3
EL10Ac2g02820 Beta vulgaris HOM05D005499 ORTHO05D006666 4.3e-39 164.9 132 65.9
PSO782G2325 Papaver somniferum HOM05D005499 ORTHO05D006666 5.7e-39 164.5 120 71.7
Psat7g172960 Pisum sativum HOM05D005499 ORTHO05D006666 5.7e-39 164.5 132 63.6
QL05p048106 Quercus lobata HOM05D005499 ORTHO05D006666 9.7e-39 163.7 102 80.4
Aa31LG5G10870 Aethionema arabicum HOM05D005499 ORTHO05D006666 4.8e-38 161.4 133 66.2
Hund13392 Selenicereus undatus HOM05D005499 ORTHO05D006666 4.8e-38 161.4 133 65.4
A03p32370 Brassica napus HOM05D005499 ORTHO05D006666 8.2e-38 160.6 113 75.2
C03p39430 Brassica napus HOM05D005499 ORTHO05D006666 8.2e-38 160.6 113 75.2
BolC3t16211H Brassica oleracea HOM05D005499 ORTHO05D006666 8.2e-38 160.6 113 75.2
BraA03t12407Z Brassica rapa HOM05D005499 ORTHO05D006666 8.2e-38 160.6 113 75.2
THA.LOC104822403 Tarenaya hassleriana HOM05D005499 ORTHO05D006666 5.3e-37 157.9 131 65.6
AT3G01740 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 9.0e-37 157.1 125 65.6
Gohir.A05G341200 Gossypium hirsutum HOM05D005499 ORTHO05D006666 9.0e-37 157.1 121 70.2
HPP92_006243 Vanilla planifolia HOM05D005499 ORTHO05D006666 1.2e-36 156.8 129 65.1
ATR1098G108 Amborella trichopoda HOM05D005499 ORTHO05D006666 5.9e-36 154.5 112 73.2
CAN.G905.22 Capsicum annuum HOM05D005499 ORTHO05D006666 2.9e-35 152.1 132 62.1
AT5G14290 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 5.0e-35 151.4 133 63.9
CARHR075180 Cardamine hirsuta HOM05D005499 ORTHO05D006666 6.5e-35 151.0 114 71.1
Os12g0244200 Oryza sativa ssp. japonica HOM05D005499 ORTHO05D006666 1.9e-34 149.4 133 61.7
AL6G24990 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 2.5e-34 149.1 101 75.2
Sp3g00320 Schrenkiella parvula HOM05D005499 ORTHO05D006666 5.5e-34 147.9 114 69.3
Thhalv10021760m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 7.2e-34 147.5 116 68.1
Nitab4.5_0003764g0020 Nicotiana tabacum HOM05D005499 ORTHO05D006666 9.3e-34 147.1 133 60.2
Sed0018883 Sechium edule HOM05D005499 ORTHO05D006666 1.6e-33 146.4 132 62.9
SHI11403 Sapria himalayana HOM05D005499 ORTHO05D006666 2.1e-33 146.0 109 67.9
Cc07_g00480 Coffea canephora HOM05D005499 ORTHO05D006666 3.6e-33 145.2 134 61.2
CARHR105740 Cardamine hirsuta HOM05D005499 ORTHO05D006666 4.6e-33 144.8 112 68.8
FAN21G0236 Fragaria x ananassa HOM05D005499 ORTHO05D006666 7.4e-31 137.5 125 61.6
Zm00001eb328460 Zea mays HOM05D005499 ORTHO05D006666 7.4e-31 137.5 132 58.3
Nn1g08773 Nelumbo nucifera HOM05D005499 ORTHO05D006666 4.2e-26 121.7 120 59.2
SEGI_30393 Sequoiadendron giganteum HOM05D005499 ORTHO05D006666 7.2e-26 120.9 114 56.1
Gohir.1Z049635 Gossypium hirsutum HOM05D005499 ORTHO05D006666 3.7e-22 108.6 93 64.5
FAN02G3728 Fragaria x ananassa HOM05D005499 ORTHO05D006666 8.2e-22 107.5 57 86.0
Mapoly0005s0032 Marchantia polymorpha HOM05D005499 ORTHO05D006666 1.4e-21 106.7 110 51.8
AagrBONN_evm.TU.Sc2ySwM_362.2497 Anthoceros agrestis HOM05D005499 ORTHO05D006666 1.5e-20 103.2 91 52.7
Pp3c26_11040 Physcomitrium patens HOM05D005499 ORTHO05D006666 1.5e-20 103.2 92 52.2
CBR_g38683 Chara braunii HOM05D005499 ORTHO05D006666 2.2e-19 99.4 115 47.8
SMO164G0004 Selaginella moellendorffii HOM05D005499 ORTHO05D006666 1.1e-18 97.1 104 51.0
CARHR266370 Cardamine hirsuta HOM05D005499 ORTHO05D006666 5.3e-13 78.2 76 56.6
TAR374G0914 Trochodendron aralioides HOM05D005499 ORTHO05D006666 2.6e-12 75.9 88 50.0
Cre12.g546000 Chlamydomonas reinhardtii HOM05D005499 ORTHO05D006666 6.5e-11 71.2 99 40.4
Dinv24762 Davidia involucrata HOM05D003270 ORTHO05D003662 8.0e-09 64.3 69 55.1
MCO16G647 Micromonas commoda HOM05D005499 ORTHO05D006666 5.7e-07 58.2 123 34.1
PRCOL_00001894 Prasinoderma coloniale HOM05D005499 ORTHO05D006666 2.2e-06 56.2 97 36.1


User provided reference genes

Program Settings