Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G2557 Cannabis sativa HOM05D007317 ORTHO05D009299 4.9e-188 661.0 338 100.0
RcHm_v2.0_Chr5g0037211 Rosa chinensis HOM05D007317 ORTHO05D009299 5.2e-113 411.8 342 63.7
CSS0029394 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 3.4e-112 409.1 346 64.2
Prupe.4G201600 Prunus persica HOM05D007317 ORTHO05D009299 4.4e-112 408.7 344 65.1
CSS0009056 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 1.7e-111 406.8 346 63.6
CiPaw.11G183200 Carya illinoinensis HOM05D007317 ORTHO05D009299 2.0e-109 399.8 345 62.3
Actinidia09959 Actinidia chinensis HOM05D007317 ORTHO05D009299 1.0e-108 397.5 346 63.0
QL08p013772 Quercus lobata HOM05D007317 ORTHO05D009299 1.3e-108 397.1 348 62.1
QL08p013454 Quercus lobata HOM05D007317 ORTHO05D009299 1.7e-108 396.7 347 62.8
TAR627G0019 Trochodendron aralioides HOM05D007317 ORTHO05D009299 1.7e-108 396.7 348 62.4
TAR627G0483 Trochodendron aralioides HOM05D007317 ORTHO05D009299 2.3e-108 396.4 349 62.2
Potri.011G132500 Populus trichocarpa HOM05D007317 ORTHO05D009299 8.6e-108 394.4 343 62.1
Cfa020433 Carpinus fangiana HOM05D007317 ORTHO05D009299 1.5e-107 393.7 345 61.4
Haze_09595 Corylus avellana HOM05D007317 ORTHO05D009299 2.1e-106 389.8 345 61.2
Atru.chr2.3185 Acer truncatum HOM05D007317 ORTHO05D009299 3.6e-106 389.0 346 62.7
Atru.chr2.3195 Acer truncatum HOM05D007317 ORTHO05D009299 1.1e-105 387.5 349 61.9
Sabra11G0119300 Salix brachista HOM05D007317 ORTHO05D009299 1.8e-105 386.7 347 60.5
FvH4_3g21740 Fragaria vesca HOM05D007317 ORTHO05D009299 4.0e-105 385.6 341 60.7
PGR083G0561 Punica granatum HOM05D007317 ORTHO05D009299 5.2e-105 385.2 349 60.2
Manes.03G122200 Manihot esculenta HOM05D007317 ORTHO05D009299 1.5e-104 383.6 341 60.1
Thecc.07G054800 Theobroma cacao HOM05D007317 ORTHO05D009299 1.5e-104 383.6 340 57.9
Ca_01757_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 2.0e-104 383.3 343 60.3
Ca_01763_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 2.0e-104 383.3 343 60.3
Ciclev10008788m.g Citrus clementina HOM05D007317 ORTHO05D009299 5.8e-104 381.7 348 58.0
Aqoxy4G02123 Aquilegia oxysepala HOM05D007317 ORTHO05D009299 2.2e-103 379.8 345 60.0
ClCG10G005750 Citrullus lanatus HOM05D007317 ORTHO05D009299 1.4e-102 377.1 279 67.7
Lj3g0025188 Lotus japonicus HOM05D007317 ORTHO05D009299 7.1e-102 374.8 337 59.6
Lalb_Chr22g0357071 Lupinus albus HOM05D007317 ORTHO05D009299 2.1e-101 373.2 323 61.0
Lj1C863T3 Lonicera japonica HOM05D007317 ORTHO05D009299 4.6e-101 372.1 339 60.2
MD11G1227700 Malus domestica HOM05D007317 ORTHO05D009299 6.0e-101 371.7 342 59.6
Dinv22311 Davidia involucrata HOM05D007317 ORTHO05D009299 2.3e-100 369.8 340 60.9
Nn1g03706 Nelumbo nucifera HOM05D007317 ORTHO05D009299 5.1e-100 368.6 354 57.6
CsaV3_3G005440 Cucumis sativus L. HOM05D007317 ORTHO05D009299 6.6e-100 368.2 310 61.9
Glyma.12G214800 Glycine max HOM05D007317 ORTHO05D009299 8.6e-100 367.9 305 63.3
Medtr2g082660 Medicago truncatula HOM05D007317 ORTHO05D009299 1.5e-99 367.1 348 59.5
MELO3C025426.2 Cucumis melo HOM05D007317 ORTHO05D009299 2.5e-99 366.3 347 59.1
Duzib213G1071 Durio zibethinus HOM05D007317 ORTHO05D009299 2.5e-99 366.3 340 58.2
Phvul.005G091100 Phaseolus vulgaris HOM05D007317 ORTHO05D009299 3.3e-99 365.9 328 60.7
TWI38G0523 Tripterygium wilfordii HOM05D007317 ORTHO05D009299 4.3e-99 365.5 349 57.9
Hma1.2p1_2644F.1_g325960 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 5.6e-99 365.2 286 65.7
Lsat_1_v5_gn_0_6961 Lactuca sativa HOM05D007317 ORTHO05D001968 9.5e-99 364.4 273 69.6
VMungo1080G0023 Vigna mungo HOM05D007317 ORTHO05D009299 2.8e-98 362.8 329 58.4
EL10Ac4g07985 Beta vulgaris HOM05D007317 ORTHO05D009299 8.1e-98 361.3 347 58.8
Gorai.002G082000 Gossypium raimondii HOM05D007317 ORTHO05D009299 1.1e-97 360.9 342 55.3
Gohir.D01G060600 Gossypium hirsutum HOM05D007317 ORTHO05D009299 1.8e-97 360.1 342 55.3
Gohir.A01G074100 Gossypium hirsutum HOM05D007317 ORTHO05D009299 4.0e-97 359.0 342 55.3
MBI02_g29710_MAGBIO Magnolia biondii HOM05D007317 ORTHO05D009299 4.0e-97 359.0 346 57.8
Nitab4.5_0000092g0060 Nicotiana tabacum HOM05D007317 ORTHO05D009299 2.6e-96 356.3 345 56.2
Eucgr.F00996 Eucalyptus grandis HOM05D007317 ORTHO05D009299 4.4e-96 355.5 348 57.5
Migut.H01861 Erythranthe guttata HOM05D007317 ORTHO05D009299 7.6e-96 354.8 345 56.2
Sc03g0009140 Simmondsia chinensis HOM05D007317 ORTHO05D009299 7.6e-96 354.8 343 54.5
Nitab4.5_0000749g0020 Nicotiana tabacum HOM05D007317 ORTHO05D009299 1.7e-95 353.6 349 55.9
AUR62029234 Chenopodium quinoa HOM05D007317 ORTHO05D009299 2.2e-95 353.2 352 54.5
Peaxi162Scf01097g00014 Petunia axillaris HOM05D007317 ORTHO05D009299 2.9e-95 352.8 340 56.5
Glyma.13G286800 Glycine max HOM05D007317 ORTHO05D009299 4.9e-95 352.1 342 56.7
SalBow7G0069 Salvia bowleyana HOM05D007317 ORTHO05D009299 8.4e-95 351.3 345 58.0
GSVIVG01014590001 Vitis vinifera HOM05D007317 ORTHO05D009299 1.4e-94 350.5 345 56.8
TPR.G36790 Trifolium pratense HOM05D007317 ORTHO05D009299 4.1e-94 349.0 353 57.5
AUR62015637 Chenopodium quinoa HOM05D007317 ORTHO05D009299 9.2e-94 347.8 352 54.3
Psat5g249840 Pisum sativum HOM05D007317 ORTHO05D009299 9.2e-94 347.8 339 56.3
Sopen12g001230 Solanum pennellii HOM05D007317 ORTHO05D009299 1.6e-93 347.1 340 56.5
Solyc12g005240.1 Solanum lycopersicum HOM05D007317 ORTHO05D009299 6.0e-93 345.1 340 57.1
PGSC0003DMG400021808 Solanum tuberosum HOM05D007317 ORTHO05D009299 6.0e-93 345.1 345 56.5
Ah.06g183090 Amaranthus hybridus HOM05D007317 ORTHO05D009299 1.3e-92 344.0 281 62.6
HanXRQChr03g0077301 Helianthus annuus HOM05D007317 ORTHO05D009299 6.6e-92 341.7 343 59.2
PSO541G0431 Papaver somniferum HOM05D007317 ORTHO05D009299 5.2e-89 332.0 360 52.8
AL3G34590 Arabidopsis lyrata HOM05D007317 ORTHO05D009299 1.2e-88 330.9 311 58.5
Aa31LG8G7460 Aethionema arabicum HOM05D007317 ORTHO05D009299 3.4e-88 329.3 345 53.0
Thhalv10021080m.g Eutrema salsugineum HOM05D007317 ORTHO05D009299 5.8e-88 328.6 333 56.2
Sp3g18720 Schrenkiella parvula HOM05D007317 ORTHO05D009299 1.3e-87 327.4 345 53.6
PSO675G5311 Papaver somniferum HOM05D007317 ORTHO05D009299 3.8e-87 325.9 276 60.5
AT3G20680 Arabidopsis thaliana HOM05D007317 ORTHO05D009299 4.9e-87 325.5 312 57.1
A01p34120 Brassica napus HOM05D007317 ORTHO05D009299 4.9e-87 325.5 282 62.4
CAN.G262.21 Capsicum annuum HOM05D007317 ORTHO05D009299 8.4e-87 324.7 344 52.6
BraA01t03516Z Brassica rapa HOM05D007317 ORTHO05D009299 1.4e-86 323.9 345 55.9
C01p43540 Brassica napus HOM05D007317 ORTHO05D009299 5.4e-86 322.0 283 61.5
BolC1t04315H Brassica oleracea HOM05D007317 ORTHO05D009299 5.4e-86 322.0 283 61.5
THA.LOC104825404 Tarenaya hassleriana HOM05D007317 ORTHO05D009299 9.3e-86 321.2 352 53.4
COL.COLO4_09559 Corchorus olitorius HOM05D007317 ORTHO05D009299 1.2e-85 320.9 338 52.4
BcaC09g49009 Brassica carinata HOM05D007317 ORTHO05D009299 1.6e-85 320.5 350 53.7
Sed0024877 Sechium edule HOM05D007317 ORTHO05D009299 2.7e-85 319.7 322 54.0
BcaB04g20638 Brassica carinata HOM05D007317 ORTHO05D009299 3.5e-85 319.3 337 56.1
CARHR096490 Cardamine hirsuta HOM05D007317 ORTHO05D009299 6.0e-85 318.5 314 57.3
unitig_578.g16764 Utricularia gibba HOM05D007317 ORTHO05D009299 6.0e-85 318.5 293 55.3
Hma1.2p1_2644F.1_g325950 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 3.0e-84 316.2 286 59.4
Carub.0003s2066 Capsella rubella HOM05D007317 ORTHO05D009299 6.9e-81 305.1 312 55.8
ATR0733G181 Amborella trichopoda HOM05D007317 ORTHO05D009299 1.1e-75 287.7 288 53.1
SGA_v2.0_scaffold320G48570 Striga asiatica HOM05D007317 ORTHO05D009299 1.2e-69 267.7 295 52.5
Cc05_g13190 Coffea canephora HOM05D007317 ORTHO05D009299 3.9e-68 262.7 205 66.8
Zm00001eb291900 Zea mays HOM05D007317 ORTHO05D009299 1.6e-66 257.3 276 48.9
Os05g0500400 Oryza sativa ssp. japonica HOM05D007317 ORTHO05D009299 1.2e-61 241.1 290 45.9
FAN21G2436 Fragaria x ananassa HOM05D007317 ORTHO05D009299 3.8e-55 219.5 133 78.9
Lalb_Chr14g0366071 Lupinus albus HOM05D007317 ORTHO05D009299 1.9e-54 217.2 183 56.3
SEGI_21971 Sequoiadendron giganteum HOM05D007317 ORTHO05D009299 1.4e-49 201.1 267 39.0
Cpa.g.sc97.77 Carica papaya HOM05D007317 ORTHO05D009299 1.4e-46 191.0 191 55.0
PGSC0003DMG400016049 Solanum tuberosum HOM05D007317 ORTHO05D009299 6.3e-42 175.6 121 69.4
BolC3t18840H Brassica oleracea HOM05D007317 ORTHO05D009299 1.3e-31 141.4 250 41.6
Mapoly0015s0049 Marchantia polymorpha HOM05D007317 ORTHO05D009299 1.3e-31 141.4 273 36.6
Pp3c9_12310 Physcomitrium patens HOM05D007317 ORTHO05D009299 1.7e-31 141.0 264 34.1
BcaC01g02387 Brassica carinata HOM05D007317 ORTHO05D009299 7.5e-27 125.6 233 40.3
BcaC09g49010 Brassica carinata HOM05D007317 ORTHO05D009299 1.1e-25 121.7 131 48.1
MD03G1212500 Malus domestica HOM05D007317 ORTHO05D009299 2.4e-25 120.6 125 50.4
Dinv32111 Davidia involucrata HOM05D007317 ORTHO05D009299 3.8e-23 113.2 114 54.4
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 2.4e-17 94.0 261 27.6
Cre08.g369000 Chlamydomonas reinhardtii HOM05D007317 ORTHO05D009299 2.3e-12 77.4 330 25.8
BcaB02g11442 Brassica carinata HOM05D007317 ORTHO05D009299 5.2e-12 76.3 112 38.4


User provided reference genes

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