Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G2543 Cannabis sativa HOM05D003637 ORTHO05D004175 3.4e-86 322.0 212 100.0
CANSAT35G0345 Cannabis sativa HOM05D003637 ORTHO05D004175 3.0e-10 69.7 95 50.5
CANSAT64G0718 Cannabis sativa HOM05D003637 ORTHO05D004175 3.0e-10 69.7 95 50.5
Aa31LG5G13230 Aethionema arabicum HOM05D003637 ORTHO05D004175 3.4e-09 66.2 95 47.4
GSVIVG01036288001 Vitis vinifera HOM05D003637 ORTHO05D004175 5.7e-09 65.5 98 44.9
AL3G12170 Arabidopsis lyrata HOM05D003637 ORTHO05D004175 9.8e-09 64.7 95 45.3
AT3G02760 Arabidopsis thaliana HOM05D003637 ORTHO05D004175 9.8e-09 64.7 95 45.3
Carub.0003s0186 Capsella rubella HOM05D003637 ORTHO05D004175 9.8e-09 64.7 95 45.3
Sed0019638 Sechium edule HOM05D003637 ORTHO05D004175 9.8e-09 64.7 95 46.3
CARHR076770 Cardamine hirsuta HOM05D003637 ORTHO05D004175 1.3e-08 64.3 95 44.2
Migut.E00203 Erythranthe guttata HOM05D003637 ORTHO05D004175 1.3e-08 64.3 95 45.3
CAN.G1379.10 Capsicum annuum HOM05D003637 ORTHO05D004175 1.7e-08 63.9 95 45.3
MELO3C008093.2 Cucumis melo HOM05D003637 ORTHO05D004175 1.7e-08 63.9 95 45.3
CsaV3_2G033230 Cucumis sativus L. HOM05D003637 ORTHO05D004175 1.7e-08 63.9 95 45.3
FvH4_2g00780 Fragaria vesca HOM05D003637 ORTHO05D004175 1.7e-08 63.9 95 45.3
FAN20G2805 Fragaria x ananassa HOM05D003637 ORTHO05D004175 1.7e-08 63.9 95 45.3
FAN24G0737 Fragaria x ananassa HOM05D003637 ORTHO05D004175 1.7e-08 63.9 95 45.3
FAN27G1433 Fragaria x ananassa HOM05D003637 ORTHO05D004175 1.7e-08 63.9 95 45.3
Glyma.05G234900 Glycine max HOM05D003637 ORTHO05D004175 1.7e-08 63.9 98 43.9
Nitab4.5_0000110g0370 Nicotiana tabacum HOM05D003637 ORTHO05D004175 1.7e-08 63.9 95 45.3
Nitab4.5_0001497g0160 Nicotiana tabacum HOM05D003637 ORTHO05D004175 1.7e-08 63.9 95 45.3
Nitab4.5_0003246g0090 Nicotiana tabacum HOM05D003637 ORTHO05D004175 1.7e-08 63.9 95 45.3
Prupe.8G006900 Prunus persica HOM05D003637 ORTHO05D004175 1.7e-08 63.9 95 46.3
RcHm_v2.0_Chr6g0251201 Rosa chinensis HOM05D003637 ORTHO05D004175 1.7e-08 63.9 95 45.3
Solyc01g102800.3 Solanum lycopersicum HOM05D003637 ORTHO05D004175 1.7e-08 63.9 95 45.3
Sopen01g045200 Solanum pennellii HOM05D003637 ORTHO05D004175 1.7e-08 63.9 95 45.3
PGSC0003DMG400018260 Solanum tuberosum HOM05D003637 ORTHO05D004175 1.7e-08 63.9 95 45.3
TWI38G2004 Tripterygium wilfordii HOM05D003637 ORTHO05D004175 1.7e-08 63.9 95 46.3
TWI39G1182 Tripterygium wilfordii HOM05D003637 ORTHO05D004175 1.7e-08 63.9 95 46.3
VMungo0251G0405 Vigna mungo HOM05D003637 ORTHO05D004175 1.7e-08 63.9 96 44.8
CiPaw.03G014200 Carya illinoinensis HOM05D003637 ORTHO05D004175 2.2e-08 63.5 95 45.3
Potri.019G071400 Populus trichocarpa HOM05D003637 ORTHO05D004175 2.2e-08 63.5 95 44.2
Cpa.g.sc1431.2 Carica papaya HOM05D003637 ORTHO05D004175 2.9e-08 63.2 95 46.3
MD05G1003500 Malus domestica HOM05D003637 ORTHO05D004175 2.9e-08 63.2 95 46.3
SGA_v2.0_scaffold87G27078 Striga asiatica HOM05D003637 ORTHO05D004175 2.9e-08 63.2 95 45.3
Aqoxy1G03903 Aquilegia oxysepala HOM05D003637 ORTHO05D004175 3.7e-08 62.8 95 43.2
QL09p001806 Quercus lobata HOM05D003637 ORTHO05D004175 3.7e-08 62.8 95 43.2
QL09p050166 Quercus lobata HOM05D003637 ORTHO05D004175 3.7e-08 62.8 95 43.2
QL11p001805 Quercus lobata HOM05D003637 ORTHO05D004175 3.7e-08 62.8 95 43.2
Sabra19G0083400 Salix brachista HOM05D003637 ORTHO05D004175 3.7e-08 62.8 95 44.2
DCAR_014239 Daucus carota HOM05D003637 ORTHO05D004175 4.9e-08 62.4 95 44.2
HanXRQChr07g0194841 Helianthus annuus HOM05D003637 ORTHO05D004175 4.9e-08 62.4 94 44.7
Manes.02G201900 Manihot esculenta HOM05D003637 ORTHO05D004175 4.9e-08 62.4 95 45.3
PSO063G3025 Papaver somniferum HOM05D003637 ORTHO05D004175 4.9e-08 62.4 95 43.2
PSO782G5164 Papaver somniferum HOM05D003637 ORTHO05D004175 4.9e-08 62.4 95 43.2
Phvul.002G320100 Phaseolus vulgaris HOM05D003637 ORTHO05D004175 4.9e-08 62.4 96 43.8
Sc25g0003100 Simmondsia chinensis HOM05D003637 ORTHO05D004175 4.9e-08 62.4 95 43.2
THA.LOC104820917 Tarenaya hassleriana HOM05D003637 ORTHO05D004175 4.9e-08 62.4 95 44.2
CSS0048399 Camellia sinensis var. sinensis HOM05D003637 ORTHO05D004175 6.4e-08 62.0 95 44.2
Glyma.08G042400 Glycine max HOM05D003637 ORTHO05D004175 6.4e-08 62.0 98 42.9
Lj4g0018134 Lotus japonicus HOM05D003637 ORTHO05D004175 6.4e-08 62.0 95 44.2
Rhsim08G0251700 Rhododendron simsii HOM05D003637 ORTHO05D004175 6.4e-08 62.0 95 43.2
arahy.Tifrunner.gnm1.ann1.ICJU69 Arachis hypogaea HOM05D003637 ORTHO05D004175 1.1e-07 61.2 95 42.1
arahy.Tifrunner.gnm1.ann1.JT5ZHZ Arachis hypogaea HOM05D003637 ORTHO05D004175 1.1e-07 61.2 95 42.1
COL.COLO4_20337 Corchorus olitorius HOM05D003637 ORTHO05D004175 1.1e-07 61.2 95 43.2
Lalb_Chr16g0387641 Lupinus albus HOM05D003637 ORTHO05D004175 1.1e-07 61.2 95 43.2
arahy.Tifrunner.gnm1.ann1.5D638A Arachis hypogaea HOM05D003637 ORTHO05D004175 1.4e-07 60.8 95 41.1
arahy.Tifrunner.gnm1.ann1.TE3K01 Arachis hypogaea HOM05D003637 ORTHO05D004175 1.4e-07 60.8 95 41.1
EL10Ac1g01273 Beta vulgaris HOM05D003637 ORTHO05D004175 1.4e-07 60.8 95 43.2
ECA238G2554 Erigeron canadensis HOM05D003637 ORTHO05D004175 1.4e-07 60.8 94 43.6
Thhalv10001912m.g Eutrema salsugineum HOM05D003637 ORTHO05D004175 1.4e-07 60.8 95 43.2
Thhalv10020033m.g Eutrema salsugineum HOM05D003637 ORTHO05D004175 1.4e-07 60.8 94 43.6
MD10G1004600 Malus domestica HOM05D003637 ORTHO05D004175 1.4e-07 60.8 95 44.2
TAR374G1272 Trochodendron aralioides HOM05D003637 ORTHO05D004175 1.4e-07 60.8 95 42.1
TAR628G0957 Trochodendron aralioides HOM05D003637 ORTHO05D004175 1.4e-07 60.8 95 42.1
Ciclev10018820m.g Citrus clementina HOM05D003637 ORTHO05D004175 1.8e-07 60.5 95 43.2
Hund26943 Selenicereus undatus HOM05D003637 ORTHO05D004175 1.8e-07 60.5 95 44.2
Ah.05g170380 Amaranthus hybridus HOM05D003637 ORTHO05D004175 2.4e-07 60.1 95 43.2
MSTRG.13350 Avicennia marina HOM05D003637 ORTHO05D004175 2.4e-07 60.1 95 43.2
Cc04_g00120 Coffea canephora HOM05D003637 ORTHO05D004175 2.4e-07 60.1 95 43.2
Duzib177G0609 Durio zibethinus HOM05D003637 ORTHO05D004175 2.4e-07 60.1 95 43.2
Lsat_1_v5_gn_2_108061 Lactuca sativa HOM05D003637 ORTHO05D004175 2.4e-07 60.1 94 42.6
Sp3g01790 Schrenkiella parvula HOM05D003637 ORTHO05D004175 2.4e-07 60.1 94 43.6
BcaB04g19390 Brassica carinata HOM05D003637 ORTHO05D004175 3.2e-07 59.7 94 43.6
A03p33090 Brassica napus HOM05D003637 ORTHO05D004175 3.2e-07 59.7 94 43.6
C03p40270 Brassica napus HOM05D003637 ORTHO05D004175 3.2e-07 59.7 94 43.6
BolC3t16292H Brassica oleracea HOM05D003637 ORTHO05D004175 3.2e-07 59.7 94 43.6
BraA03t12479Z Brassica rapa HOM05D003637 ORTHO05D004175 3.2e-07 59.7 94 43.6
Gohir.A08G225700 Gossypium hirsutum HOM05D003637 ORTHO05D004175 3.2e-07 59.7 95 43.2
Gohir.D08G246100 Gossypium hirsutum HOM05D003637 ORTHO05D004175 3.2e-07 59.7 95 43.2
Gorai.004G262600 Gossypium raimondii HOM05D003637 ORTHO05D004175 3.2e-07 59.7 95 43.2
Medtr1g057860 Medicago truncatula HOM05D003637 ORTHO05D004175 3.2e-07 59.7 95 43.2
Psat6g083160 Pisum sativum HOM05D003637 ORTHO05D004175 3.2e-07 59.7 95 43.2
SHI17420 Sapria himalayana HOM05D003637 ORTHO05D004175 3.2e-07 59.7 95 44.2
AUR62013381 Chenopodium quinoa HOM05D003637 ORTHO05D004175 4.1e-07 59.3 95 43.2
AUR62038534 Chenopodium quinoa HOM05D003637 ORTHO05D004175 4.1e-07 59.3 95 43.2
Duzib106G1310 Durio zibethinus HOM05D003637 ORTHO05D004175 4.1e-07 59.3 95 43.2
Lsat_1_v5_gn_3_107861 Lactuca sativa HOM05D003637 ORTHO05D004175 4.1e-07 59.3 87 47.1
PSO513G0157 Papaver somniferum HOM05D003637 ORTHO05D004175 4.1e-07 59.3 95 42.1
Atru.chr13.2499 Acer truncatum HOM05D003637 ORTHO05D004175 5.4e-07 58.9 95 43.2
Atru.chr13.2508 Acer truncatum HOM05D003637 ORTHO05D004175 5.4e-07 58.9 95 43.2
Lsat_1_v5_gn_7_60281 Lactuca sativa HOM05D003637 ORTHO05D004175 9.2e-07 58.2 94 41.5
Thecc.05G195900 Theobroma cacao HOM05D003637 ORTHO05D004175 1.2e-06 57.8 95 42.1
ATR1136G178 Amborella trichopoda HOM05D003637 ORTHO05D004175 1.6e-06 57.4 95 41.1
BNapus_Darmor_BZH_scaffold_122p00030 Brassica napus HOM05D003637 ORTHO05D004175 1.6e-06 57.4 94 42.6
BNapus_Darmor_BZH_scaffold_99p00050 Brassica napus HOM05D003637 ORTHO05D004175 1.6e-06 57.4 94 42.6
BolC1t05898H Brassica oleracea HOM05D003637 ORTHO05D004175 1.6e-06 57.4 94 42.6
TPR.G29194 Trifolium pratense HOM05D003637 ORTHO05D004175 1.6e-06 57.4 95 41.1
Ca_14602_v3 Cicer arietinum L. HOM05D003637 ORTHO05D004175 2.0e-06 57.0 95 41.1
Nn3g21609 Nelumbo nucifera HOM05D003637 ORTHO05D004175 2.0e-06 57.0 43 67.4
PGR042G1411 Punica granatum HOM05D003637 ORTHO05D004175 2.0e-06 57.0 95 40.0
Peaxi162Scf00194g01048 Petunia axillaris HOM05D003637 ORTHO05D004175 3.5e-06 56.2 95 41.1
BcaNung05408 Brassica carinata HOM05D003637 ORTHO05D004175 4.6e-06 55.8 94 41.5
Eucgr.F02946 Eucalyptus grandis HOM05D003637 ORTHO05D004175 4.6e-06 55.8 95 40.0
Os05g0150900 Oryza sativa ssp. japonica HOM05D003637 ORTHO05D004175 4.6e-06 55.8 95 40.0
PSO210G5637 Papaver somniferum HOM05D003637 ORTHO05D004175 4.6e-06 55.8 96 41.7
BcaB04g21398 Brassica carinata HOM05D003637 ORTHO05D004175 5.9e-06 55.5 43 67.4
PGR083G1739 Punica granatum HOM05D003637 ORTHO05D004175 5.9e-06 55.5 94 40.4
HPP92_000901 Vanilla planifolia HOM05D003637 ORTHO05D004175 7.8e-06 55.1 95 41.1


User provided reference genes

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