Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G2524 Cannabis sativa HOM05D005031 ORTHO05D006098 1.2e-92 343.2 174 100.0
TPR.G1244 Trifolium pratense HOM05D005031 ORTHO05D006098 2.1e-73 279.3 174 80.5
Medtr4g130180 Medicago truncatula HOM05D005031 ORTHO05D006098 3.5e-73 278.5 174 80.5
Duzib168G1565 Durio zibethinus HOM05D005031 ORTHO05D006098 1.0e-72 276.9 174 78.2
Thecc.09G157500 Theobroma cacao HOM05D005031 ORTHO05D006098 2.3e-72 275.8 174 77.6
Sed0023985 Sechium edule HOM05D005031 ORTHO05D006098 3.0e-72 275.4 174 78.7
PGR031G2537 Punica granatum HOM05D005031 ORTHO05D006098 3.9e-72 275.0 174 76.4
Duzib187G1655 Durio zibethinus HOM05D005031 ORTHO05D006098 5.1e-72 274.6 174 77.6
Potri.018G101100 Populus trichocarpa HOM05D005031 ORTHO05D006098 5.1e-72 274.6 174 77.6
RcHm_v2.0_Chr4g0405231 Rosa chinensis HOM05D005031 ORTHO05D006098 5.1e-72 274.6 174 76.4
Ca_21160_v3 Cicer arietinum L. HOM05D005031 ORTHO05D006098 6.7e-72 274.2 174 78.7
Gohir.D08G098400 Gossypium hirsutum HOM05D005031 ORTHO05D006098 8.7e-72 273.9 174 77.0
COL.COLO4_10074 Corchorus olitorius HOM05D005031 ORTHO05D006098 1.5e-71 273.1 174 77.6
Duzib187G0728 Durio zibethinus HOM05D005031 ORTHO05D006098 1.5e-71 273.1 174 77.0
Ciclev10012924m.g Citrus clementina HOM05D005031 ORTHO05D006098 2.5e-71 272.3 174 76.4
Gorai.004G106100 Gossypium raimondii HOM05D005031 ORTHO05D006098 3.3e-71 271.9 174 76.4
Lj6g0018969 Lotus japonicus HOM05D005031 ORTHO05D006098 4.3e-71 271.6 174 77.6
Gohir.A08G087500 Gossypium hirsutum HOM05D005031 ORTHO05D006098 5.7e-71 271.2 174 75.9
AL4G13970 Arabidopsis lyrata HOM05D005031 ORTHO05D006098 9.7e-71 270.4 174 77.6
Prupe.1G100400 Prunus persica HOM05D005031 ORTHO05D006098 1.3e-70 270.0 174 75.9
arahy.Tifrunner.gnm1.ann1.QFVN2V Arachis hypogaea HOM05D005031 ORTHO05D006098 2.8e-70 268.9 174 78.2
CsaV3_2G007780 Cucumis sativus L. HOM05D005031 ORTHO05D006098 3.7e-70 268.5 174 75.3
RcHm_v2.0_Chr5g0047191 Rosa chinensis HOM05D005031 ORTHO05D006098 3.7e-70 268.5 174 74.7
AT2G23940 Arabidopsis thaliana HOM05D005031 ORTHO05D006098 6.3e-70 267.7 174 75.9
Carub.0004s0310 Capsella rubella HOM05D005031 ORTHO05D006098 1.8e-69 266.2 174 75.3
FvH4_3g25860 Fragaria vesca HOM05D005031 ORTHO05D006098 1.8e-69 266.2 174 74.7
FAN11G2096 Fragaria x ananassa HOM05D005031 ORTHO05D006098 1.8e-69 266.2 174 74.7
Glyma.17G070000 Glycine max HOM05D005031 ORTHO05D006098 3.1e-69 265.4 174 75.9
VMungo1215G0734 Vigna mungo HOM05D005031 ORTHO05D006098 3.1e-69 265.4 174 75.9
MD00G1091200 Malus domestica HOM05D005031 ORTHO05D006098 4.1e-69 265.0 174 75.9
Glyma.02G207700 Glycine max HOM05D005031 ORTHO05D006098 9.0e-69 263.8 174 75.3
Phvul.003G152700 Phaseolus vulgaris HOM05D005031 ORTHO05D006098 9.0e-69 263.8 174 75.3
Sp7g28380 Schrenkiella parvula HOM05D005031 ORTHO05D006098 9.0e-69 263.8 174 73.6
MD00G1059200 Malus domestica HOM05D005031 ORTHO05D006098 1.2e-68 263.5 174 75.9
Nn8g40193 Nelumbo nucifera HOM05D005031 ORTHO05D006098 1.2e-68 263.5 174 75.3
FAN21G1649 Fragaria x ananassa HOM05D005031 ORTHO05D006098 2.0e-68 262.7 174 74.1
Phvul.010G125500 Phaseolus vulgaris HOM05D005031 ORTHO05D006098 2.0e-68 262.7 174 74.7
Thhalv10026393m.g Eutrema salsugineum HOM05D005031 ORTHO05D006098 2.6e-68 262.3 174 73.6
EL10Ac7g17961 Beta vulgaris HOM05D005031 ORTHO05D006098 7.6e-68 260.8 174 74.7
Manes.06G033000 Manihot esculenta HOM05D005031 ORTHO05D006098 1.0e-67 260.4 174 75.9
FAN25G2017 Fragaria x ananassa HOM05D005031 ORTHO05D006098 1.7e-67 259.6 174 73.6
CiPaw.06G050600 Carya illinoinensis HOM05D005031 ORTHO05D006098 2.2e-67 259.2 174 73.6
Eucgr.H00166 Eucalyptus grandis HOM05D005031 ORTHO05D006098 2.9e-67 258.8 174 74.1
THA.LOC104819960 Tarenaya hassleriana HOM05D005031 ORTHO05D006098 2.9e-67 258.8 174 70.7
BcaNung00560 Brassica carinata HOM05D005031 ORTHO05D006098 3.8e-67 258.5 174 72.4
BcaNung00561 Brassica carinata HOM05D005031 ORTHO05D006098 3.8e-67 258.5 174 72.4
C07p57970 Brassica napus HOM05D005031 ORTHO05D006098 3.8e-67 258.5 174 72.4
BolC7t46255H Brassica oleracea HOM05D005031 ORTHO05D006098 3.8e-67 258.5 174 72.4
BraA03t15048Z Brassica rapa HOM05D005031 ORTHO05D006098 6.5e-67 257.7 174 72.4
A03p59910 Brassica napus HOM05D005031 ORTHO05D006098 8.5e-67 257.3 174 72.4
Sabra18G0087000 Salix brachista HOM05D005031 ORTHO05D006098 1.1e-66 256.9 194 68.0
THA.LOC104803530 Tarenaya hassleriana HOM05D005031 ORTHO05D006098 1.1e-66 256.9 174 72.4
C01p08550 Brassica napus HOM05D005031 ORTHO05D006098 1.4e-66 256.5 174 71.8
TWI73G0469 Tripterygium wilfordii HOM05D005031 ORTHO05D006098 1.4e-66 256.5 174 74.1
Lalb_Chr07g0180011 Lupinus albus HOM05D005031 ORTHO05D006098 3.2e-66 255.4 175 75.4
arahy.Tifrunner.gnm1.ann1.0TL0BP Arachis hypogaea HOM05D005031 ORTHO05D006098 4.2e-66 255.0 198 68.2
CARHR184610 Cardamine hirsuta HOM05D005031 ORTHO05D006098 4.2e-66 255.0 174 74.1
MELO3C004109.2 Cucumis melo HOM05D005031 ORTHO05D006098 4.2e-66 255.0 174 72.4
Hund18050 Selenicereus undatus HOM05D005031 ORTHO05D006098 7.2e-66 254.2 174 73.6
BcaC09g51840 Brassica carinata HOM05D005031 ORTHO05D006098 9.3e-66 253.8 174 71.8
ClCG11G012690 Citrullus lanatus HOM05D005031 ORTHO05D006098 9.3e-66 253.8 174 72.4
Lj4g0007960 Lotus japonicus HOM05D005031 ORTHO05D006098 1.6e-65 253.1 175 73.7
Aa31LG2G20010 Aethionema arabicum HOM05D005031 ORTHO05D006098 2.1e-65 252.7 174 71.3
PSO017G4787 Papaver somniferum HOM05D005031 ORTHO05D006098 2.1e-65 252.7 174 73.6
AL7G21640 Arabidopsis lyrata HOM05D005031 ORTHO05D006098 3.6e-65 251.9 174 71.3
Oeu045637.1 Olea europaea HOM05D005031 ORTHO05D006098 4.6e-65 251.5 174 74.1
PSO478G0084 Papaver somniferum HOM05D005031 ORTHO05D006098 4.6e-65 251.5 174 73.6
GSVIVG01033204001 Vitis vinifera HOM05D005031 ORTHO05D006098 1.3e-64 250.0 174 71.8
Oeu031856.2 Olea europaea HOM05D005031 ORTHO05D006098 1.8e-64 249.6 174 72.4
A01p07680 Brassica napus HOM05D005031 ORTHO05D006098 2.3e-64 249.2 174 69.5
ATR0580G158 Amborella trichopoda HOM05D005031 ORTHO05D006098 3.0e-64 248.8 174 71.3
BraA01t00711Z Brassica rapa HOM05D005031 ORTHO05D006098 3.0e-64 248.8 173 69.4
PSO675G4517 Papaver somniferum HOM05D005031 ORTHO05D006098 5.1e-64 248.1 174 73.0
Hma1.2p1_2290F.1_g319050 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 6.7e-64 247.7 174 71.3
TAR636G0261 Trochodendron aralioides HOM05D005031 ORTHO05D006098 5.7e-63 244.6 171 70.2
CAN.G1190.6 Capsicum annuum HOM05D005031 ORTHO05D006098 7.4e-63 244.2 174 72.4
CDE05G2574 Ceratophyllum demersum HOM05D005031 ORTHO05D006098 2.8e-62 242.3 174 67.8
Atru.chr12.1707 Acer truncatum HOM05D005031 ORTHO05D006098 4.8e-62 241.5 174 69.5
Hma1.2p1_1493F.1_g286836 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 4.8e-62 241.5 174 68.4
BolC1t00837H Brassica oleracea HOM05D005031 ORTHO05D006098 6.3e-62 241.1 166 69.9
AT4G30500 Arabidopsis thaliana HOM05D005031 ORTHO05D006098 1.1e-61 240.4 174 69.0
BolC1t00831H Brassica oleracea HOM05D005031 ORTHO05D006098 2.4e-61 239.2 166 69.3
Zm00001eb186920 Zea mays HOM05D005031 ORTHO05D006098 3.4e-60 235.3 175 69.1
Aqoxy5G00990 Aquilegia oxysepala HOM05D005031 ORTHO05D006098 4.5e-60 235.0 171 69.0
QL01p011713 Quercus lobata HOM05D005031 ORTHO05D006098 1.0e-59 233.8 173 68.2
Atru.chr12.1715 Acer truncatum HOM05D005031 ORTHO05D006098 1.4e-58 229.9 143 75.5
HPP92_025776 Vanilla planifolia HOM05D005031 ORTHO05D006098 1.4e-58 229.9 174 66.1
Peaxi162Scf00038g00324 Petunia axillaris HOM05D005031 ORTHO05D006098 3.2e-58 228.8 174 68.4
ECA234G3840 Erigeron canadensis HOM05D005031 ORTHO05D006098 9.4e-58 227.3 174 66.7
TWI23G1034 Tripterygium wilfordii HOM05D005031 ORTHO05D006098 9.4e-58 227.3 158 70.3
Migut.K00291 Erythranthe guttata HOM05D005031 ORTHO05D006098 3.6e-57 225.3 174 66.1
Hma1.2p1_2438F.1_g322190 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 6.1e-57 224.6 156 69.2
SalBow1G8617 Salvia bowleyana HOM05D005031 ORTHO05D006098 7.9e-57 224.2 174 66.1
SGA_v2.0_scaffold12G06032 Striga asiatica HOM05D005031 ORTHO05D006098 1.8e-56 223.0 174 66.1
HanXRQChr10g0307831 Helianthus annuus HOM05D005031 ORTHO05D006098 3.0e-56 222.2 174 64.9
vmacro01000 Vaccinium macrocarpon HOM05D005031 ORTHO05D006098 3.9e-56 221.9 174 65.5
BolC1t00834H Brassica oleracea HOM05D005031 ORTHO05D006098 6.7e-56 221.1 151 68.9
Nitab4.5_0001036g0100 Nicotiana tabacum HOM05D005031 ORTHO05D006098 1.1e-55 220.3 174 66.1
Nitab4.5_0002545g0040 Nicotiana tabacum HOM05D005031 ORTHO05D006098 1.1e-55 220.3 174 66.1
PGSC0003DMG400011218 Solanum tuberosum HOM05D005031 ORTHO05D006098 1.5e-55 219.9 174 66.7
Sed0023066 Sechium edule HOM05D005031 ORTHO05D006098 2.6e-55 219.2 146 76.0
Solyc07g006150.3 Solanum lycopersicum HOM05D005031 ORTHO05D006098 3.3e-55 218.8 174 66.7
Sopen07g002260 Solanum pennellii HOM05D005031 ORTHO05D006098 3.3e-55 218.8 174 66.7
MBI14_g16418_MAGBIO Magnolia biondii HOM05D005031 ORTHO05D006098 7.4e-55 217.6 145 74.5
Psat0s2826g0160 Pisum sativum HOM05D005031 ORTHO05D006098 2.8e-54 215.7 122 82.0
Actinidia38656 Actinidia chinensis HOM05D005031 ORTHO05D006098 8.2e-54 214.2 174 63.2
Dinv41325 Davidia involucrata HOM05D005031 ORTHO05D006098 3.4e-52 208.8 174 60.9
Rhsim03G0261100 Rhododendron simsii HOM05D005031 ORTHO05D006098 2.2e-51 206.1 196 57.7
Actinidia33308 Actinidia chinensis HOM05D005031 ORTHO05D006098 3.8e-51 205.3 174 62.1
Cc06_g14310 Coffea canephora HOM05D005031 ORTHO05D006098 1.4e-50 203.4 174 60.9
MSTRG.10716 Avicennia marina HOM05D005031 ORTHO05D006098 5.5e-50 201.4 174 60.3
Sc05g0001840 Simmondsia chinensis HOM05D005031 ORTHO05D006098 7.2e-50 201.1 122 76.2
CSS0024126 Camellia sinensis var. sinensis HOM05D005031 ORTHO05D006098 4.7e-49 198.4 171 59.1
CSS0012616 Camellia sinensis var. sinensis HOM05D005031 ORTHO05D006098 6.1e-49 198.0 171 59.1
Hma1.2p1_2725F.1_g327560 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 8.0e-49 197.6 122 75.4
AagrBONN_evm.TU.Sc2ySwM_368.3216 Anthoceros agrestis HOM05D005031 ORTHO05D006098 2.3e-48 196.1 172 55.8
Os02g0666800 Oryza sativa ssp. japonica HOM05D005031 ORTHO05D006098 6.7e-48 194.5 175 56.0
Lsat_1_v5_gn_5_88201 Lactuca sativa HOM05D005031 ORTHO05D006098 2.0e-47 193.0 176 58.0
Rhsim03G0260600 Rhododendron simsii HOM05D005031 ORTHO05D006098 1.3e-46 190.3 239 47.3
AUR62001168 Chenopodium quinoa HOM05D005031 ORTHO05D006098 1.6e-44 183.3 182 56.0
SMO164G0234 Selaginella moellendorffii HOM05D005031 ORTHO05D006098 8.5e-43 177.6 176 54.5
CBR_g3690 Chara braunii HOM05D005031 ORTHO05D006098 2.7e-41 172.6 173 49.7
Mapoly0003s0226 Marchantia polymorpha HOM05D005031 ORTHO05D006098 1.0e-40 170.6 172 49.4
Pp3c11_17250 Physcomitrium patens HOM05D005031 ORTHO05D006098 4.4e-39 165.2 174 55.2
Haze_21256 Corylus avellana HOM05D005031 ORTHO05D006098 1.3e-38 163.7 95 77.9
AUR62022155 Chenopodium quinoa HOM05D005031 ORTHO05D006098 2.7e-36 156.0 94 74.5
Ah.08g218880 Amaranthus hybridus HOM05D005031 ORTHO05D006098 4.5e-36 155.2 94 74.5
Cpa.g.sc743.3 Carica papaya HOM05D005031 ORTHO05D006098 5.0e-35 151.8 93 73.1
BcaNung01743 Brassica carinata HOM05D005031 ORTHO05D006098 1.6e-28 130.2 111 60.4
BcaB08g34788 Brassica carinata HOM05D005031 ORTHO05D006098 9.5e-26 120.9 120 57.5
CARHR238390 Cardamine hirsuta HOM05D005031 ORTHO05D006098 2.1e-25 119.8 96 56.2
Cre02.g096850 Chlamydomonas reinhardtii HOM05D005031 ORTHO05D006098 1.3e-22 110.5 168 36.9
BcaB04g19089 Brassica carinata HOM05D005031 ORTHO05D006098 8.3e-22 107.8 121 52.1
Lj7A465G52 Lonicera japonica HOM05D005031 ORTHO05D006098 1.4e-21 107.1 66 71.2
MELO3C020438.2 Cucumis melo HOM05D005031 ORTHO05D006098 8.6e-19 97.8 55 76.4
unitig_62.g23488 Utricularia gibba HOM05D005031 ORTHO05D006098 1.4e-16 90.5 85 57.6
MELO3C010414.2 Cucumis melo HOM05D005031 ORTHO05D006098 1.8e-16 90.1 53 73.6
MELO3C032992.2 Cucumis melo HOM05D005031 ORTHO05D006098 3.0e-16 89.4 48 79.2
PRCOL_00004780 Prasinoderma coloniale HOM05D005031 ORTHO05D006098 1.5e-15 87.0 179 33.0
MCO15G043 Micromonas commoda HOM05D005031 ORTHO05D006098 3.5e-12 75.9 174 31.6
MELO3C033057.2 Cucumis melo HOM05D005031 ORTHO05D006098 4.6e-12 75.5 38 84.2
Rhsim03G0261000 Rhododendron simsii HOM05D005031 ORTHO05D006098 1.2e-09 67.4 93 43.0
CARHR184590 Cardamine hirsuta HOM05D005031 ORTHO05D006098 3.4e-07 59.3 48 60.4


User provided reference genes

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