Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 1.7e-58 229.2 122 100.0
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 1.2e-51 206.5 122 91.8
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 2.8e-40 168.7 102 84.3
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 1.5e-38 162.9 113 75.2
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 9.9e-38 160.2 106 76.4
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 2.9e-37 158.7 111 74.8
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 3.7e-37 158.3 111 73.9
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 3.7e-37 158.3 111 73.9
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 8.3e-37 157.1 112 74.1
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 1.9e-36 156.0 102 77.5
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 3.2e-36 155.2 112 72.3
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 3.2e-36 155.2 106 73.6
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 7.1e-36 154.1 102 74.5
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 9.2e-36 153.7 109 68.8
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 9.2e-36 153.7 111 72.1
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 1.2e-35 153.3 112 72.3
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 1.6e-35 152.9 111 73.0
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 2.1e-35 152.5 106 72.6
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 2.7e-35 152.1 106 71.7
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 2.7e-35 152.1 108 68.5
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 2.7e-35 152.1 101 75.2
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 4.6e-35 151.4 108 67.6
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 4.6e-35 151.4 102 73.5
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 6.0e-35 151.0 116 66.4
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 7.8e-35 150.6 111 70.3
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 1.0e-34 150.2 106 72.6
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 1.3e-34 149.8 102 72.5
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 1.3e-34 149.8 102 72.5
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 3.0e-34 148.7 102 73.5
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 3.0e-34 148.7 105 72.4
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 3.9e-34 148.3 112 67.9
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 3.9e-34 148.3 102 70.6
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 5.1e-34 147.9 97 76.3
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 6.6e-34 147.5 106 70.8
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 8.6e-34 147.1 111 67.6
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 8.6e-34 147.1 107 73.8
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 1.1e-33 146.7 108 63.9
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 1.5e-33 146.4 104 71.2
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 1.9e-33 146.0 104 71.2
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 2.5e-33 145.6 117 63.2
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 3.3e-33 145.2 102 69.6
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 3.3e-33 145.2 108 63.0
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 4.3e-33 144.8 102 70.6
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 5.6e-33 144.4 102 70.6
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 5.6e-33 144.4 107 68.2
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 7.3e-33 144.1 111 68.5
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 9.6e-33 143.7 106 69.8
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 1.6e-32 142.9 115 62.6
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 2.1e-32 142.5 101 70.3
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 2.8e-32 142.1 112 67.9
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 2.8e-32 142.1 107 68.2
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 3.6e-32 141.7 104 69.2
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 3.6e-32 141.7 102 71.6
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 6.2e-32 141.0 116 61.2
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 6.2e-32 141.0 104 69.2
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 6.2e-32 141.0 108 63.9
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 8.1e-32 140.6 102 72.5
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 1.1e-31 140.2 108 65.7
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 1.4e-31 139.8 102 69.6
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 1.4e-31 139.8 112 65.2
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 1.4e-31 139.8 111 64.9
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 1.8e-31 139.4 101 69.3
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 3.1e-31 138.7 112 63.4
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 4.0e-31 138.3 111 64.9
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 5.2e-31 137.9 112 65.2
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 5.2e-31 137.9 111 64.9
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 5.2e-31 137.9 101 67.3
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 5.2e-31 137.9 102 66.7
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 5.2e-31 137.9 102 69.6
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 6.8e-31 137.5 102 70.6
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 8.9e-31 137.1 102 71.6
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 8.9e-31 137.1 115 64.3
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 8.9e-31 137.1 112 64.3
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 8.9e-31 137.1 112 64.3
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 8.9e-31 137.1 112 64.3
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 8.9e-31 137.1 112 64.3
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 8.9e-31 137.1 112 64.3
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 8.9e-31 137.1 102 69.6
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 1.2e-30 136.7 112 66.1
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 1.5e-30 136.3 108 61.1
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 2.6e-30 135.6 102 67.6
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 9.9e-30 133.7 108 63.0
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 1.7e-29 132.9 111 61.3
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 3.8e-29 131.7 116 61.2
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 8.4e-29 130.6 82 80.5
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 1.4e-28 129.8 138 54.3
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 3.2e-28 128.6 95 70.5
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 5.4e-28 127.9 91 72.5
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 7.1e-28 127.5 111 60.4
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 6.0e-27 124.4 94 66.0
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 3.9e-26 121.7 82 73.2
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 6.6e-26 120.9 100 67.0
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 6.6e-26 120.9 82 73.2
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 1.9e-25 119.4 89 67.4
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 2.5e-25 119.0 98 63.3
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 2.5e-25 119.0 82 69.5
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 9.6e-25 117.1 85 69.4
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 2.1e-24 115.9 166 44.0
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 2.8e-24 115.5 82 68.3
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 3.6e-24 115.2 81 69.1
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 6.2e-24 114.4 85 67.1
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 1.4e-23 113.2 83 68.7
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 2.6e-22 109.0 83 65.1
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 4.4e-22 108.2 82 64.6
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 1.4e-20 103.2 112 50.9
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.2e-19 100.1 71 73.2
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 1.5e-17 93.2 71 70.4
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 4.3e-17 91.7 91 54.9
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 1.3e-16 90.1 108 44.4
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 5.3e-15 84.7 56 78.6
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 2.2e-13 79.3 118 42.4
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.1e-12 77.0 52 71.2
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 1.4e-12 76.6 72 58.3
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 3.2e-12 75.5 52 69.2
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 7.1e-12 74.3 60 65.0
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 7.9e-11 70.9 115 37.4
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 3.0e-10 68.9 58 63.8
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 9.0e-07 57.4 102 37.3


User provided reference genes

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