Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G2385 Cannabis sativa HOM05D004805 ORTHO05D005756 2.8e-140 501.9 251 100.0
FvH4_3g11630 Fragaria vesca HOM05D004805 ORTHO05D005756 2.7e-106 389.0 240 77.1
FAN16G0962 Fragaria x ananassa HOM05D004805 ORTHO05D005756 2.3e-105 386.0 240 76.2
FAN25G0449 Fragaria x ananassa HOM05D004805 ORTHO05D005756 1.1e-104 383.6 240 76.2
Prupe.3G149500 Prunus persica HOM05D004805 ORTHO05D005756 3.6e-103 378.6 241 75.9
RcHm_v2.0_Chr5g0018651 Rosa chinensis HOM05D004805 ORTHO05D005756 4.7e-103 378.3 241 75.1
Cfa020188 Carpinus fangiana HOM05D004805 ORTHO05D005756 8.1e-103 377.5 248 75.0
RcHm_v2.0_Chr7g0241681 Rosa chinensis HOM05D004805 ORTHO05D005756 3.1e-102 375.6 241 74.3
MD05G1261800 Malus domestica HOM05D004805 ORTHO05D005756 1.5e-101 373.2 241 72.2
Ciclev10009329m.g Citrus clementina HOM05D004805 ORTHO05D005756 7.6e-101 370.9 241 74.7
Atru.chr9.1539 Acer truncatum HOM05D004805 ORTHO05D005756 2.2e-100 369.4 240 74.6
Haze_09828 Corylus avellana HOM05D004805 ORTHO05D005756 6.4e-100 367.9 247 74.1
Psat2g007280 Pisum sativum HOM05D004805 ORTHO05D005756 1.9e-99 366.3 246 72.0
Duzib268G0855 Durio zibethinus HOM05D004805 ORTHO05D005756 9.3e-99 364.0 240 75.4
Phvul.008G279200 Phaseolus vulgaris HOM05D004805 ORTHO05D005756 1.6e-98 363.2 246 70.3
GSVIVG01014691001 Vitis vinifera HOM05D004805 ORTHO05D005756 4.6e-98 361.7 247 72.1
TPR.G8592 Trifolium pratense HOM05D004805 ORTHO05D005756 6.0e-98 361.3 246 70.7
Atru.chr13.2016 Acer truncatum HOM05D004805 ORTHO05D005756 1.3e-97 360.1 241 72.2
LjContig00081g0004731 Lotus japonicus HOM05D004805 ORTHO05D005756 1.7e-97 359.8 244 71.3
Gorai.004G033700 Gossypium raimondii HOM05D004805 ORTHO05D005756 3.0e-97 359.0 238 74.4
arahy.Tifrunner.gnm1.ann1.KL44N8 Arachis hypogaea HOM05D004805 ORTHO05D005756 1.1e-96 357.1 243 71.2
Nn1g07520 Nelumbo nucifera HOM05D004805 ORTHO05D005756 1.9e-96 356.3 247 70.4
PSO832G0973 Papaver somniferum HOM05D004805 ORTHO05D005756 3.3e-96 355.5 242 71.5
Ca_06397_v3 Cicer arietinum L. HOM05D004805 ORTHO05D005756 4.3e-96 355.1 246 69.9
Medtr5g095960 Medicago truncatula HOM05D004805 ORTHO05D005756 4.3e-96 355.1 246 68.3
CsaV3_3G004240 Cucumis sativus L. HOM05D004805 ORTHO05D005756 1.6e-95 353.2 245 70.6
Glyma.17G150300 Glycine max HOM05D004805 ORTHO05D005756 1.6e-95 353.2 245 69.0
CiPaw.12G138400 Carya illinoinensis HOM05D004805 ORTHO05D005756 2.1e-95 352.8 246 70.7
Glyma.14G013400 Glycine max HOM05D004805 ORTHO05D005756 4.8e-95 351.7 245 69.0
Actinidia30402 Actinidia chinensis HOM05D004805 ORTHO05D005756 1.1e-94 350.5 247 67.2
Aa31LG3G11710 Aethionema arabicum HOM05D004805 ORTHO05D005756 1.1e-94 350.5 237 70.0
arahy.Tifrunner.gnm1.ann1.1A96RS Arachis hypogaea HOM05D004805 ORTHO05D005756 1.1e-94 350.5 243 70.8
PGR142G3095 Punica granatum HOM05D004805 ORTHO05D005756 1.1e-94 350.5 240 72.5
AL8G31370 Arabidopsis lyrata HOM05D004805 ORTHO05D005756 1.4e-94 350.1 237 70.9
Carub.0008s1616 Capsella rubella HOM05D004805 ORTHO05D005756 1.4e-94 350.1 237 71.3
Lj1g0004670 Lotus japonicus HOM05D004805 ORTHO05D005756 1.4e-94 350.1 246 68.7
PSO063G7513 Papaver somniferum HOM05D004805 ORTHO05D005756 1.8e-94 349.7 242 69.4
TAR626G0989 Trochodendron aralioides HOM05D004805 ORTHO05D005756 2.4e-94 349.4 247 69.2
ClCG10G004450 Citrullus lanatus HOM05D004805 ORTHO05D005756 3.1e-94 349.0 245 69.8
Dinv10336 Davidia involucrata HOM05D004805 ORTHO05D005756 3.1e-94 349.0 249 69.9
Lalb_Chr09g0322761 Lupinus albus HOM05D004805 ORTHO05D005756 3.1e-94 349.0 247 68.8
Sed0016007 Sechium edule HOM05D004805 ORTHO05D005756 2.0e-93 346.3 245 68.6
BcaB01g04372 Brassica carinata HOM05D004805 ORTHO05D005756 2.6e-93 345.9 237 69.6
Aqoxy4G03118 Aquilegia oxysepala HOM05D004805 ORTHO05D005756 5.8e-93 344.7 248 69.0
CARHR269130 Cardamine hirsuta HOM05D004805 ORTHO05D005756 5.8e-93 344.7 237 71.3
HanXRQChr03g0074031 Helianthus annuus HOM05D004805 ORTHO05D005756 7.6e-93 344.4 228 71.5
BcaC04g20199 Brassica carinata HOM05D004805 ORTHO05D005756 1.3e-92 343.6 237 69.6
Eucgr.F03688 Eucalyptus grandis HOM05D004805 ORTHO05D005756 4.9e-92 341.7 241 70.5
CSS0002120 Camellia sinensis var. sinensis HOM05D004805 ORTHO05D005756 6.4e-92 341.3 247 65.6
Lsat_1_v5_gn_9_89740 Lactuca sativa HOM05D004805 ORTHO05D005756 8.4e-92 340.9 245 67.8
Sopen07g033800 Solanum pennellii HOM05D004805 ORTHO05D005756 8.4e-92 340.9 242 69.0
Peaxi162Scf00139g01316 Petunia axillaris HOM05D004805 ORTHO05D005756 1.1e-91 340.5 242 69.0
Sp6g17690 Schrenkiella parvula HOM05D004805 ORTHO05D005756 1.1e-91 340.5 237 69.2
Solyc07g065590.4 Solanum lycopersicum HOM05D004805 ORTHO05D005756 1.1e-91 340.5 243 68.7
Actinidia05003 Actinidia chinensis HOM05D004805 ORTHO05D005756 1.9e-91 339.7 246 65.4
Carub.0005s0950 Capsella rubella HOM05D004805 ORTHO05D005756 1.9e-91 339.7 237 70.5
BcaC01g06393 Brassica carinata HOM05D004805 ORTHO05D005756 4.2e-91 338.6 237 69.2
Carub.0005s0937 Capsella rubella HOM05D004805 ORTHO05D005756 5.4e-91 338.2 237 70.0
AT5G55810 Arabidopsis thaliana HOM05D004805 ORTHO05D005756 9.3e-91 337.4 237 68.4
Lj1C890G11 Lonicera japonica HOM05D004805 ORTHO05D005756 9.3e-91 337.4 248 68.5
ECA234G3028 Erigeron canadensis HOM05D004805 ORTHO05D005756 1.2e-90 337.0 246 67.9
THA.LOC104811668 Tarenaya hassleriana HOM05D004805 ORTHO05D005756 1.2e-90 337.0 238 68.1
BcaB08g35939 Brassica carinata HOM05D004805 ORTHO05D005756 1.6e-90 336.7 242 67.4
CAN.G623.13 Capsicum annuum HOM05D004805 ORTHO05D005756 1.6e-90 336.7 243 68.3
DCAR_013232 Daucus carota HOM05D004805 ORTHO05D005756 2.1e-90 336.3 241 66.4
PGSC0003DMG400022170 Solanum tuberosum HOM05D004805 ORTHO05D005756 2.1e-90 336.3 216 72.7
Potri.013G021900 Populus trichocarpa HOM05D004805 ORTHO05D005756 3.5e-90 335.5 239 66.5
MELO3C014119.2 Cucumis melo HOM05D004805 ORTHO05D005756 4.6e-90 335.1 282 61.7
Rhsim06G0229900 Rhododendron simsii HOM05D004805 ORTHO05D005756 7.9e-90 334.3 249 64.7
SGA_v2.0_scaffold44G16806 Striga asiatica HOM05D001081 ORTHO05D003320 1.0e-89 334.0 248 66.5
Cc00_g18290 Coffea canephora HOM05D004805 ORTHO05D005756 2.3e-89 332.8 239 69.0
Sabra05G0034900 Salix brachista HOM05D004805 ORTHO05D005756 1.3e-87 327.0 244 63.1
Potri.005G032300 Populus trichocarpa HOM05D004805 ORTHO05D005756 1.8e-86 323.2 239 64.9
EL10Ac1g00341 Beta vulgaris HOM05D004805 ORTHO05D005756 2.4e-86 322.8 248 64.5
Manes.03G141600 Manihot esculenta HOM05D004805 ORTHO05D005756 4.0e-86 322.0 243 64.6
Gohir.A08G025200 Gossypium hirsutum HOM05D004805 ORTHO05D005756 5.3e-86 321.6 238 68.9
SalBow4G0417 Salvia bowleyana HOM05D004805 ORTHO05D005756 1.2e-85 320.5 267 62.2
Gohir.D08G035700 Gossypium hirsutum HOM05D004805 ORTHO05D005756 2.0e-85 319.7 238 68.5
MD10G1240100 Malus domestica HOM05D004805 ORTHO05D005756 4.5e-85 318.5 203 73.9
Duzib213G0036 Durio zibethinus HOM05D004805 ORTHO05D005756 7.6e-85 317.8 239 67.8
MSTRG.27026 Avicennia marina HOM05D004805 ORTHO05D005756 8.4e-84 314.3 246 64.2
ATR0090G032 Amborella trichopoda HOM05D004805 ORTHO05D005756 4.2e-83 312.0 218 68.8
HPP92_025829 Vanilla planifolia HOM05D004805 ORTHO05D005756 2.1e-82 309.7 244 61.5
QL08p004083 Quercus lobata HOM05D004805 ORTHO05D005756 7.9e-82 307.8 205 73.7
TWI38G2348 Tripterygium wilfordii HOM05D004805 ORTHO05D005756 1.3e-81 307.0 202 73.3
A03p13810 Brassica napus HOM05D004805 ORTHO05D005756 1.6e-79 300.1 210 68.1
VMungo0647G2576 Vigna mungo HOM05D004805 ORTHO05D005756 6.2e-79 298.1 195 71.3
C03p16250 Brassica napus HOM05D004805 ORTHO05D005756 1.8e-78 296.6 210 68.6
C09p46750 Brassica napus HOM05D004805 ORTHO05D005756 3.1e-78 295.8 211 68.2
Zm00001eb191530 Zea mays HOM05D004805 ORTHO05D005756 5.3e-78 295.0 217 65.0
A10p13030 Brassica napus HOM05D004805 ORTHO05D005756 1.2e-77 293.9 211 68.2
Hma1.2p1_1402F.1_g281100 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 1.5e-77 293.5 216 67.1
BolC9t57526H Brassica oleracea HOM05D004805 ORTHO05D005756 3.4e-77 292.4 211 67.8
BraA10t43397Z Brassica rapa HOM05D004805 ORTHO05D005756 5.8e-77 291.6 211 67.3
Nitab4.5_0002736g0040 Nicotiana tabacum HOM05D004805 ORTHO05D005756 2.2e-76 289.7 192 70.8
AUR62022629 Chenopodium quinoa HOM05D004805 ORTHO05D005756 1.6e-74 283.5 238 62.6
Medtr3g007850 Medicago truncatula HOM05D004805 ORTHO05D005756 2.1e-74 283.1 196 69.4
Sc16g0008090 Simmondsia chinensis HOM05D004805 ORTHO05D005756 4.6e-74 282.0 224 62.9
Hund27237 Selenicereus undatus HOM05D004805 ORTHO05D005756 1.3e-73 280.4 224 64.3
vmacro11591 Vaccinium macrocarpon HOM05D004805 ORTHO05D005756 3.0e-73 279.3 206 67.5
Mapoly0011s0011 Marchantia polymorpha HOM05D004805 ORTHO05D005756 5.1e-73 278.5 239 59.0
Pp3c20_23380 Physcomitrium patens HOM05D004805 ORTHO05D005756 6.7e-73 278.1 244 54.1
Nitab4.5_0007415g0050 Nicotiana tabacum HOM05D004805 ORTHO05D005756 1.1e-72 277.3 195 68.7
Thecc.07G013300 Theobroma cacao HOM05D004805 ORTHO05D005756 1.1e-72 277.3 177 75.1
Pp3c3_17230 Physcomitrium patens HOM05D004805 ORTHO05D005756 1.9e-72 276.6 239 54.8
Prupe.4G103800 Prunus persica HOM05D004805 ORTHO05D005756 2.5e-72 276.2 241 58.9
AagrBONN_evm.TU.Sc2ySwM_362.484 Anthoceros agrestis HOM05D004805 ORTHO05D005756 5.7e-72 275.0 243 53.9
Pp3c10_25720 Physcomitrium patens HOM05D004805 ORTHO05D005756 8.2e-71 271.2 241 53.1
Lsat_1_v5_gn_4_137701 Lactuca sativa HOM05D004805 ORTHO05D005756 9.0e-70 267.7 188 70.2
Pp3c13_13680 Physcomitrium patens HOM05D004805 ORTHO05D005756 2.2e-68 263.1 239 52.7
FAN21G3052 Fragaria x ananassa HOM05D004805 ORTHO05D005756 6.5e-68 261.5 190 68.9
CAN.G849.12 Capsicum annuum HOM05D004805 ORTHO05D005756 1.2e-66 257.3 183 67.8
SGA_v2.0_scaffold192G40544 Striga asiatica HOM05D001081 ORTHO05D003320 7.9e-66 254.6 232 58.6
AUR62004423 Chenopodium quinoa HOM05D004805 ORTHO05D005756 8.7e-65 251.1 166 72.3
Migut.F01027 Erythranthe guttata HOM05D004805 ORTHO05D005756 5.7e-64 248.4 242 55.4
AagrBONN_evm.TU.Sc2ySwM_228.3487 Anthoceros agrestis HOM05D004805 ORTHO05D005756 2.8e-63 246.1 237 49.8
CARHR269180 Cardamine hirsuta HOM05D004805 ORTHO05D005756 1.4e-62 243.8 164 71.3
CBR_g34363 Chara braunii HOM05D000019 ORTHO05D000002 2.9e-60 236.1 217 54.4
Hma1.2p1_1516F.1_g288260 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 1.0e-57 227.6 202 58.4
AagrBONN_evm.TU.Sc2ySwM_344.1047 Anthoceros agrestis HOM05D004805 ORTHO05D005756 3.0e-57 226.1 185 56.8
Lj3g0007860 Lotus japonicus HOM05D004805 ORTHO05D005756 4.3e-56 222.2 244 52.9
Ah.05g180060 Amaranthus hybridus HOM05D004805 ORTHO05D005756 1.7e-55 220.3 173 65.3
BraA03t10684Z Brassica rapa HOM05D004805 ORTHO05D005756 4.5e-53 212.2 226 52.2
TAR624G1110 Trochodendron aralioides HOM05D004805 ORTHO05D005756 1.7e-52 210.3 203 56.2
SMO364G0361 Selaginella moellendorffii HOM05D004805 ORTHO05D005756 1.4e-51 207.2 215 47.4
AagrBONN_evm.TU.Sc2ySwM_344.1045 Anthoceros agrestis HOM05D004805 ORTHO05D005756 7.2e-51 204.9 196 51.0
Glyma.19G097900 Glycine max HOM05D004805 ORTHO05D005756 1.8e-49 200.3 144 66.7
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 2.6e-48 196.4 172 58.7
BolC3t14047H Brassica oleracea HOM05D004805 ORTHO05D005756 2.8e-47 193.0 236 48.7
Rhsim04G0012600 Rhododendron simsii HOM05D004805 ORTHO05D005756 4.1e-46 189.1 166 58.4
Thhalv10015421m.g Eutrema salsugineum HOM05D004805 ORTHO05D005756 2.0e-45 186.8 192 52.6
COL.COLO4_09836 Corchorus olitorius HOM05D004805 ORTHO05D005756 1.7e-44 183.7 119 78.2
Os02g0814900 Oryza sativa ssp. japonica HOM05D004805 ORTHO05D005756 2.9e-44 183.0 192 51.6
Cpa.g.sc26.30 Carica papaya HOM05D004805 ORTHO05D005756 6.7e-41 171.8 108 74.1
PRCOL_00003123 Prasinoderma coloniale HOM05D004805 ORTHO05D005756 7.5e-40 168.3 219 40.6
ECA240G4670 Erigeron canadensis HOM05D004805 ORTHO05D005756 7.0e-38 161.8 105 70.5
unitig_0.g252 Utricularia gibba HOM05D004805 ORTHO05D005756 5.0e-36 155.6 105 68.6
Os09g0347900 Oryza sativa ssp. japonica HOM05D004805 ORTHO05D005756 9.4e-35 151.4 111 64.0
PSO170G0902 Papaver somniferum HOM05D004805 ORTHO05D005756 6.1e-34 148.7 100 71.0
Glyma.02G300600 Glycine max HOM05D004805 ORTHO05D005756 8.8e-33 144.8 105 64.8
QL08p004070 Quercus lobata HOM05D000031 ORTHO05D005756 9.1e-30 134.8 259 37.8
Hma1.2p1_0226F.1_g095340 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 7.2e-27 125.2 162 45.1
SEGI_22417 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 1.4e-22 110.9 103 52.4
Cfa025186 Carpinus fangiana HOM05D004805 ORTHO05D005756 3.1e-22 109.8 161 36.6
ECA234G1395 Erigeron canadensis HOM05D004805 ORTHO05D005756 1.6e-18 97.4 67 67.2
Oeu037059.1 Olea europaea HOM05D004805 ORTHO05D005756 1.3e-15 87.8 65 67.7
CBR_g34381 Chara braunii HOM05D000019 ORTHO05D000048 1.7e-15 87.4 81 56.8
FAN24G2452 Fragaria x ananassa HOM05D004805 ORTHO05D005756 1.8e-14 84.0 50 78.0
SEGI_01519 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 3.9e-12 76.3 72 55.6
Cre14.g626950 Chlamydomonas reinhardtii HOM05D004805 ORTHO05D005756 4.7e-10 69.3 112 33.9
FAN16G1285 Fragaria x ananassa HOM05D004805 ORTHO05D005756 5.2e-09 65.9 39 79.5
SEGI_37983 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 5.2e-09 65.9 82 41.5


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