Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G2324 Cannabis sativa HOM05D007038 ORTHO05D008893 4.1e-201 704.5 359 100.0
QL02p093776 Quercus lobata HOM05D007038 ORTHO05D008893 4.5e-131 471.9 349 69.6
CiPaw.16G107900 Carya illinoinensis HOM05D007038 ORTHO05D008893 4.4e-126 455.3 348 67.5
Atru.chr7.996 Acer truncatum HOM05D007038 ORTHO05D008893 1.8e-124 449.9 349 67.9
RcHm_v2.0_Chr2g0085451 Rosa chinensis HOM05D007038 ORTHO05D008893 3.1e-124 449.1 351 64.4
MD15G1150700 Malus domestica HOM05D007038 ORTHO05D008893 1.6e-123 446.8 356 66.6
Cfa020806 Carpinus fangiana HOM05D007038 ORTHO05D008893 7.7e-123 444.5 347 66.3
FvH4_1g00730 Fragaria vesca HOM05D007038 ORTHO05D008893 5.0e-122 441.8 351 63.2
Prupe.7G265000 Prunus persica HOM05D007038 ORTHO05D008893 1.0e-119 434.1 357 63.6
FAN28G0561 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.8e-119 433.3 372 59.7
Manes.06G033300 Manihot esculenta HOM05D007038 ORTHO05D008893 6.7e-119 431.4 354 62.7
arahy.Tifrunner.gnm1.ann1.ULM9BE Arachis hypogaea HOM05D007038 ORTHO05D008893 5.7e-118 428.3 351 63.8
arahy.Tifrunner.gnm1.ann1.2821YK Arachis hypogaea HOM05D007038 ORTHO05D008893 7.5e-118 427.9 352 63.4
FAN23G2273 Fragaria x ananassa HOM05D007038 ORTHO05D008893 6.3e-117 424.9 369 59.3
TWI63G0746 Tripterygium wilfordii HOM05D007038 ORTHO05D008893 1.0e-114 417.5 348 61.5
Gohir.A13G206700 Gossypium hirsutum HOM05D007038 ORTHO05D008893 1.7e-114 416.8 345 61.7
FAN23G1724 Fragaria x ananassa HOM05D007038 ORTHO05D008893 2.2e-114 416.4 374 58.3
Gorai.013G241400 Gossypium raimondii HOM05D007038 ORTHO05D008893 1.1e-113 414.1 345 61.7
GSVIVG01023636001 Vitis vinifera HOM05D007038 ORTHO05D008893 1.1e-113 414.1 339 64.0
Glyma.02G205400 Glycine max HOM05D007038 ORTHO05D008893 1.5e-113 413.7 351 61.5
TPR.G24832 Trifolium pratense HOM05D007038 ORTHO05D008893 4.2e-113 412.1 350 62.0
VMungo1215G2991 Vigna mungo HOM05D007038 ORTHO05D008893 4.2e-113 412.1 351 61.8
Dinv42838 Davidia involucrata HOM05D007038 ORTHO05D008893 7.2e-113 411.4 363 60.1
Dinv43261 Davidia involucrata HOM05D007038 ORTHO05D008893 1.2e-112 410.6 361 60.4
Medtr4g130580 Medicago truncatula HOM05D007038 ORTHO05D008893 1.6e-112 410.2 356 60.7
Actinidia23561 Actinidia chinensis HOM05D007038 ORTHO05D008893 1.4e-111 407.1 367 59.7
Lj4g0021787 Lotus japonicus HOM05D007038 ORTHO05D008893 1.2e-110 404.1 358 61.2
Glyma.17G072600 Glycine max HOM05D007038 ORTHO05D008893 1.5e-110 403.7 352 61.4
CSS0015539 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 2.6e-110 402.9 369 60.7
Psat0s3930g0120 Pisum sativum HOM05D007038 ORTHO05D008893 6.3e-109 398.3 347 61.7
Lj9A719G52 Lonicera japonica HOM05D007038 ORTHO05D008893 1.1e-108 397.5 356 60.4
CSS0013222 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 1.4e-108 397.1 369 59.1
Sabra06G0139000 Salix brachista HOM05D007038 ORTHO05D008893 2.9e-106 389.4 453 49.7
TAR626G0465 Trochodendron aralioides HOM05D007038 ORTHO05D008893 2.9e-106 389.4 341 59.5
Sed0007561 Sechium edule HOM05D007038 ORTHO05D008893 2.3e-103 379.8 350 57.1
PGR102G3121 Punica granatum HOM05D007038 ORTHO05D008893 3.0e-103 379.4 364 54.1
Lalb_Chr13g0300771 Lupinus albus HOM05D007038 ORTHO05D008893 4.0e-103 379.0 344 58.4
Sopen07g001900 Solanum pennellii HOM05D007038 ORTHO05D008893 1.5e-102 377.1 378 53.4
Nn8g39966 Nelumbo nucifera HOM05D007038 ORTHO05D008893 2.2e-101 373.2 345 58.3
PGSC0003DMG400011195 Solanum tuberosum HOM05D007038 ORTHO05D008893 1.4e-100 370.5 395 51.4
Cpa.g.sc46.174 Carica papaya HOM05D007038 ORTHO05D008893 1.8e-100 370.2 345 58.3
Sc14g0000940 Simmondsia chinensis HOM05D007038 ORTHO05D008893 2.4e-100 369.8 344 54.4
ECA234G0501 Erigeron canadensis HOM05D007038 ORTHO05D008893 1.2e-99 367.5 348 56.6
Rhsim03G0258100 Rhododendron simsii HOM05D007038 ORTHO05D008893 2.9e-98 362.8 397 52.6
Eucgr.C02504 Eucalyptus grandis HOM05D007038 ORTHO05D008893 1.5e-97 360.5 349 54.7
ClCG02G014390 Citrullus lanatus HOM05D007038 ORTHO05D008893 2.8e-96 356.3 379 52.0
Migut.J01371 Erythranthe guttata HOM05D007038 ORTHO05D008893 1.4e-95 354.0 318 58.2
Aqoxy7G03364 Aquilegia oxysepala HOM05D007038 ORTHO05D008893 1.8e-95 353.6 352 53.7
Thhalv10015603m.g Eutrema salsugineum HOM05D007038 ORTHO05D008893 6.8e-95 351.7 360 51.9
Lsat_1_v5_gn_5_89520 Lactuca sativa HOM05D007038 ORTHO05D008893 5.8e-94 348.6 373 52.5
EL10Ac8g18937 Beta vulgaris HOM05D007038 ORTHO05D008893 2.2e-93 346.7 355 51.5
Haze_19163 Corylus avellana HOM05D007038 ORTHO05D008893 2.2e-93 346.7 383 52.7
C02p13780 Brassica napus HOM05D007038 ORTHO05D008893 3.7e-93 345.9 354 52.0
BolC2t07497H Brassica oleracea HOM05D007038 ORTHO05D008893 3.7e-93 345.9 354 52.0
Phvul.003G155000 Phaseolus vulgaris HOM05D007038 ORTHO05D008893 6.4e-93 345.1 329 58.4
FAN26G1014 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.1e-92 344.4 345 54.5
CARHR271660 Cardamine hirsuta HOM05D007038 ORTHO05D008893 1.2e-91 340.9 364 51.1
Carub.0008s1841 Capsella rubella HOM05D007038 ORTHO05D008893 1.6e-91 340.5 356 52.8
AL8G33930 Arabidopsis lyrata HOM05D007038 ORTHO05D008893 2.0e-91 340.1 362 51.4
THA.LOC104811831 Tarenaya hassleriana HOM05D007038 ORTHO05D008893 7.8e-91 338.2 353 51.0
AT5G57880 Arabidopsis thaliana HOM05D007038 ORTHO05D008893 3.9e-90 335.9 360 52.2
Ciclev10009099m.g Citrus clementina HOM05D007038 ORTHO05D008893 5.6e-89 332.0 284 60.2
DCAR_019405 Daucus carota HOM05D007038 ORTHO05D008893 1.2e-88 330.9 294 56.8
HanXRQChr16g0520471 Helianthus annuus HOM05D007038 ORTHO05D008893 2.1e-88 330.1 420 46.9
PSO063G4531 Papaver somniferum HOM05D007038 ORTHO05D008893 1.2e-86 324.3 344 50.6
Duzib150G1077 Durio zibethinus HOM05D007038 ORTHO05D008893 2.0e-86 323.6 341 50.7
BcaC04g19921 Brassica carinata HOM05D007038 ORTHO05D008893 4.9e-85 318.9 401 46.9
Ca_21139_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 4.9e-85 318.9 309 57.0
Ca_21144_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 4.9e-85 318.9 309 57.0
SalBow1G2783 Salvia bowleyana HOM05D007038 ORTHO05D008893 4.9e-85 318.9 372 48.4
A10p15240 Brassica napus HOM05D007038 ORTHO05D008893 8.3e-85 318.2 380 47.6
Aa31LG3G13710 Aethionema arabicum HOM05D007038 ORTHO05D008893 3.2e-84 316.2 356 48.9
BraA10t43606Z Brassica rapa HOM05D007038 ORTHO05D008893 7.0e-84 315.1 401 45.6
C09p49760 Brassica napus HOM05D007038 ORTHO05D008893 7.8e-83 311.6 381 47.0
BraA02t05887Z Brassica rapa HOM05D007038 ORTHO05D008893 2.3e-82 310.1 359 48.7
Cc06_g14750 Coffea canephora HOM05D007038 ORTHO05D008893 2.3e-82 310.1 307 55.4
A02p08130 Brassica napus HOM05D007038 ORTHO05D008893 3.9e-82 309.3 359 48.2
BcaB05g22382 Brassica carinata HOM05D007038 ORTHO05D008893 8.6e-82 308.1 370 48.9
Hund08926 Selenicereus undatus HOM05D007038 ORTHO05D008893 4.3e-81 305.8 377 46.7
Nitab4.5_0002724g0040 Nicotiana tabacum HOM05D007038 ORTHO05D008893 8.1e-80 301.6 402 44.5
Thecc.09G151200 Theobroma cacao HOM05D007038 ORTHO05D008893 1.4e-79 300.8 278 57.2
Os08g0555800 Oryza sativa ssp. japonica HOM05D007038 ORTHO05D008893 2.3e-79 300.1 343 48.4
vmacro06062 Vaccinium macrocarpon HOM05D007038 ORTHO05D008893 3.7e-77 292.7 354 48.0
BolC9t57827H Brassica oleracea HOM05D007038 ORTHO05D008893 6.4e-77 292.0 428 42.1
ATR0019G005 Amborella trichopoda HOM05D007038 ORTHO05D008893 4.1e-76 289.3 358 46.9
SGA_v2.0_scaffold265G46092 Striga asiatica HOM05D007038 ORTHO05D008893 1.6e-75 287.3 370 44.9
MBI14_g09472_MAGBIO Magnolia biondii HOM05D007038 ORTHO05D008893 5.1e-74 282.3 303 52.8
HanXRQChr16g0520451 Helianthus annuus HOM05D007038 ORTHO05D008893 6.6e-74 282.0 325 49.2
Zm00001eb180360 Zea mays HOM05D007038 ORTHO05D008893 2.5e-73 280.0 350 46.3
Gohir.D13G211300 Gossypium hirsutum HOM05D007038 ORTHO05D008893 3.6e-64 249.6 282 50.7
AUR62028347 Chenopodium quinoa HOM05D007038 ORTHO05D008893 1.6e-56 224.2 338 40.2
AUR62025344 Chenopodium quinoa HOM05D007038 ORTHO05D008893 2.8e-56 223.4 340 40.3
Potri.006G182301 Populus trichocarpa HOM05D007038 ORTHO05D008893 2.4e-52 210.3 156 67.3
Nitab4.5_0002320g0050 Nicotiana tabacum HOM05D001418 ORTHO05D002038 3.2e-52 209.9 402 37.1
CsaV3_2G007610 Cucumis sativus L. HOM05D007038 ORTHO05D008893 3.7e-48 196.4 290 40.7
Solyc07g005790.4 Solanum lycopersicum HOM05D007038 ORTHO05D008893 4.8e-48 196.1 160 61.9
unitig_46.g18476 Utricularia gibba HOM05D007038 ORTHO05D008893 6.2e-48 195.7 239 47.7
CAN.G160.33 Capsicum annuum HOM05D007038 ORTHO05D008893 1.5e-41 174.5 143 60.8
Potri.006G182201 Populus trichocarpa HOM05D007038 ORTHO05D008893 2.1e-40 170.6 130 68.5
Solyc07g005800.2 Solanum lycopersicum HOM05D007038 ORTHO05D008893 2.1e-40 170.6 163 52.8
Peaxi162Scf00401g00326 Petunia axillaris HOM05D007038 ORTHO05D008893 3.7e-40 169.9 177 52.5
Peaxi162Scf00401g00327 Petunia axillaris HOM05D007038 ORTHO05D008893 4.0e-39 166.4 129 64.3
SHI02845 Sapria himalayana HOM05D007038 ORTHO05D008893 9.7e-25 118.6 137 52.6
CDE05G1617 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 6.9e-23 112.5 155 41.9
Pp3c7_6690 Physcomitrium patens HOM05D007038 ORTHO05D008893 1.0e-21 108.6 361 25.5
CDE02G0638 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 3.8e-21 106.7 153 39.9
Hma1.2p1_0222F.1_g093710 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 1.2e-19 101.7 65 70.8
Hma1.2p1_0222F.1_g093742 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 1.2e-19 101.7 65 70.8
PSO782G2459 Papaver somniferum HOM05D007038 ORTHO05D008893 2.1e-19 100.9 115 50.4
HPP92_020432 Vanilla planifolia HOM05D000367 ORTHO05D008893 3.3e-09 67.0 91 44.0


User provided reference genes

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