Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 1.8e-83 313.2 240 100.0
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 2.4e-56 223.0 237 59.9
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 7.1e-56 221.5 237 59.5
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 4.3e-53 212.2 134 82.1
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 4.3e-53 212.2 134 82.8
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 7.3e-53 211.5 134 81.3
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 1.6e-52 210.3 134 81.3
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 1.6e-52 210.3 134 81.3
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 4.8e-52 208.8 134 80.6
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 4.8e-52 208.8 237 55.7
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 8.1e-52 208.0 134 79.1
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 8.1e-52 208.0 134 80.6
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 1.4e-51 207.2 134 82.1
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 1.8e-51 206.8 134 80.6
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 2.4e-51 206.5 134 78.4
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 3.1e-51 206.1 134 80.6
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 9.0e-51 204.5 237 55.7
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 2.6e-50 203.0 134 79.1
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 3.4e-50 202.6 134 78.4
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 3.4e-50 202.6 134 79.9
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 5.8e-50 201.8 134 76.9
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 1.3e-49 200.7 134 78.4
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 1.3e-49 200.7 134 80.6
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 2.2e-49 199.9 134 78.4
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 2.9e-49 199.5 134 77.6
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 2.9e-49 199.5 236 53.4
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 6.4e-49 198.4 134 77.6
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 6.4e-49 198.4 134 79.9
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 1.4e-48 197.2 134 74.6
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 3.2e-48 196.1 134 77.6
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 3.2e-48 196.1 134 76.1
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 3.2e-48 196.1 134 77.6
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 3.2e-48 196.1 134 76.9
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 4.2e-48 195.7 134 73.9
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 5.4e-48 195.3 134 75.4
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 5.4e-48 195.3 163 66.9
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 9.3e-48 194.5 134 76.1
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 9.3e-48 194.5 134 76.1
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 9.3e-48 194.5 134 74.6
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 1.2e-47 194.1 134 76.9
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 1.2e-47 194.1 134 74.6
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 1.6e-47 193.7 134 76.9
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 7.9e-47 191.4 134 73.1
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 1.0e-46 191.0 134 75.4
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 1.0e-46 191.0 134 73.1
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 1.3e-46 190.7 134 74.6
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 1.3e-46 190.7 134 74.6
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 1.3e-46 190.7 151 68.2
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 1.8e-46 190.3 134 76.1
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 1.8e-46 190.3 134 72.4
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 2.3e-46 189.9 134 75.4
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 3.0e-46 189.5 133 75.9
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 3.0e-46 189.5 134 73.9
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 8.7e-46 188.0 134 72.4
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 1.1e-45 187.6 134 72.4
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 1.1e-45 187.6 237 51.5
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 1.9e-45 186.8 134 72.4
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 1.9e-45 186.8 134 73.1
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 2.5e-45 186.4 134 72.4
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 2.5e-45 186.4 134 73.1
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 3.3e-45 186.0 134 70.1
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 4.3e-45 185.7 134 70.1
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 4.3e-45 185.7 134 70.1
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 7.4e-45 184.9 134 70.9
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 1.3e-44 184.1 236 53.0
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 1.3e-44 184.1 134 70.9
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 1.6e-44 183.7 134 70.1
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 1.6e-44 183.7 134 70.1
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 1.6e-44 183.7 134 70.1
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 1.6e-44 183.7 134 70.1
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 2.1e-44 183.3 134 73.1
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 2.1e-44 183.3 134 71.6
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 2.1e-44 183.3 134 72.4
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 2.1e-44 183.3 134 70.9
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 2.8e-44 183.0 134 70.1
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 3.7e-44 182.6 134 70.1
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 4.8e-44 182.2 134 70.9
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 4.8e-44 182.2 134 70.9
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 6.2e-44 181.8 134 70.1
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 6.2e-44 181.8 134 73.9
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 6.2e-44 181.8 134 70.1
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 6.2e-44 181.8 134 70.1
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 8.1e-44 181.4 152 67.1
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 1.1e-43 181.0 134 72.4
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 1.1e-43 181.0 134 70.9
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 3.1e-43 179.5 134 73.1
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 5.3e-43 178.7 134 70.9
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 6.9e-43 178.3 134 70.9
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.5e-42 177.2 134 73.1
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.6e-42 176.4 134 73.1
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 3.4e-42 176.0 134 69.4
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 4.5e-42 175.6 134 69.4
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 5.8e-42 175.3 140 67.9
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 7.6e-42 174.9 134 69.4
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 7.6e-42 174.9 134 67.2
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 2.9e-41 172.9 134 70.9
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.9e-41 172.9 134 70.9
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.9e-41 172.9 134 70.9
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 4.9e-41 172.2 134 68.7
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 3.2e-40 169.5 132 65.9
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 2.1e-39 166.8 127 69.3
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 2.7e-39 166.4 134 67.2
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 1.0e-38 164.5 134 65.7
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 3.3e-37 159.5 188 53.7
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 2.8e-36 156.4 134 67.9
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 1.2e-34 151.0 254 42.5
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 1.0e-33 147.9 139 61.9
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 1.7e-33 147.1 128 61.7
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 3.8e-33 146.0 98 79.6
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 1.4e-32 144.1 128 60.2
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 2.6e-26 123.2 75 84.0
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 2.6e-26 123.2 73 83.6
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 2.2e-25 120.2 134 47.8
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 3.8e-25 119.4 134 47.0
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 1.1e-24 117.9 97 64.9
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 2.5e-24 116.7 134 49.3
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 3.2e-24 116.3 97 69.1
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 6.1e-23 112.1 135 48.1
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 3.9e-22 109.4 104 54.8
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 3.1e-19 99.8 77 67.5
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 6.9e-19 98.6 74 68.9
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 2.2e-17 93.6 106 47.2
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 3.3e-13 79.7 101 46.5


User provided reference genes

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