Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G2145 Cannabis sativa HOM05D006454 ORTHO05D008024 3.5e-209 731.9 523 100.0
FAN21G2064 Fragaria x ananassa HOM05D006454 ORTHO05D008024 1.1e-106 391.3 521 65.1
MD11G1204700 Malus domestica HOM05D006454 ORTHO05D008024 2.5e-106 390.2 523 65.8
FvH4_3g24060 Fragaria vesca HOM05D006454 ORTHO05D008024 5.6e-106 389.0 521 65.3
FAN11G0689 Fragaria x ananassa HOM05D006454 ORTHO05D008024 5.6e-106 389.0 521 65.3
FAN25G3289 Fragaria x ananassa HOM05D006454 ORTHO05D008024 3.6e-105 386.3 521 64.7
MD03G1188700 Malus domestica HOM05D006454 ORTHO05D008024 6.2e-105 385.6 522 69.3
FAN25G1123 Fragaria x ananassa HOM05D006454 ORTHO05D008024 5.2e-104 382.5 521 64.3
Prupe.4G234400 Prunus persica HOM05D006454 ORTHO05D008024 2.6e-103 380.2 518 65.6
Haze_09788 Corylus avellana HOM05D006454 ORTHO05D008024 3.8e-102 376.3 532 65.0
RcHm_v2.0_Chr5g0042641 Rosa chinensis HOM05D006454 ORTHO05D008024 6.4e-102 375.6 521 65.6
Gorai.013G155100 Gossypium raimondii HOM05D006454 ORTHO05D008024 1.9e-101 374.0 488 70.1
Gohir.D13G138500 Gossypium hirsutum HOM05D006454 ORTHO05D008024 7.1e-101 372.1 488 70.1
QL08p005504 Quercus lobata HOM05D006454 ORTHO05D008024 7.8e-100 368.6 533 64.0
Gohir.A13G134866 Gossypium hirsutum HOM05D006454 ORTHO05D008024 1.3e-99 367.9 488 69.5
Cfa020229 Carpinus fangiana HOM05D006454 ORTHO05D008024 2.3e-99 367.1 542 63.8
Atru.chr2.3605 Acer truncatum HOM05D006454 ORTHO05D008024 5.3e-96 355.9 491 72.1
Thecc.07G022300 Theobroma cacao HOM05D006454 ORTHO05D008024 6.9e-96 355.5 482 66.0
MELO3C024909.2 Cucumis melo HOM05D006454 ORTHO05D008024 4.4e-95 352.8 520 63.7
Glyma.14G015800 Glycine max HOM05D006454 ORTHO05D008024 1.6e-92 344.4 474 70.3
Sed0021870 Sechium edule HOM05D006454 ORTHO05D008024 2.3e-91 340.5 518 64.5
Manes.15G063200 Manihot esculenta HOM05D006454 ORTHO05D008024 1.1e-90 338.2 531 64.8
arahy.Tifrunner.gnm1.ann1.AYWF3K Arachis hypogaea HOM05D006454 ORTHO05D008024 4.3e-90 336.3 464 70.7
THA.LOC104813444 Tarenaya hassleriana HOM05D006454 ORTHO05D008024 4.3e-90 336.3 502 65.5
Carub.0008s1595 Capsella rubella HOM05D006454 ORTHO05D008024 2.8e-89 333.6 479 63.9
CsaV3_7G018450 Cucumis sativus L. HOM05D006454 ORTHO05D008024 2.8e-89 333.6 522 65.7
Sp6g17500 Schrenkiella parvula HOM05D006454 ORTHO05D008024 3.6e-89 333.2 486 62.8
Potri.001G361800 Populus trichocarpa HOM05D006454 ORTHO05D008024 4.8e-89 332.8 524 63.7
Ciclev10008511m.g Citrus clementina HOM05D006454 ORTHO05D008024 6.2e-89 332.4 520 66.3
ClCG09G021120 Citrullus lanatus HOM05D006454 ORTHO05D008024 8.1e-89 332.0 494 69.4
CiPaw.11G201000 Carya illinoinensis HOM05D006454 ORTHO05D008024 1.4e-88 331.3 376 80.3
TWI39G0040 Tripterygium wilfordii HOM05D006454 ORTHO05D008024 1.8e-88 330.9 472 69.3
arahy.Tifrunner.gnm1.ann1.IBL7LR Arachis hypogaea HOM05D006454 ORTHO05D008024 2.4e-88 330.5 462 70.6
VMungo0647G1066 Vigna mungo HOM05D006454 ORTHO05D008024 1.2e-87 328.2 470 70.4
Eucgr.F03524 Eucalyptus grandis HOM05D006454 ORTHO05D008024 3.4e-87 326.6 489 68.7
Aa31LG3G11530 Aethionema arabicum HOM05D006454 ORTHO05D008024 4.5e-87 326.2 473 64.3
Glyma.02G297900 Glycine max HOM05D006454 ORTHO05D008024 2.2e-86 323.9 474 69.2
AL8G31150 Arabidopsis lyrata HOM05D006454 ORTHO05D008024 3.8e-86 323.2 479 62.8
BraA03t10695Z Brassica rapa HOM05D006454 ORTHO05D008024 3.8e-86 323.2 495 62.0
BcaB01g04358 Brassica carinata HOM05D006454 ORTHO05D008024 6.4e-86 322.4 487 63.0
Lalb_Chr04g0247971 Lupinus albus HOM05D006454 ORTHO05D008024 1.1e-85 321.6 483 63.1
C03p16380 Brassica napus HOM05D006454 ORTHO05D008024 1.9e-85 320.9 482 62.7
ECA246G2030 Erigeron canadensis HOM05D006454 ORTHO05D008024 3.2e-85 320.1 531 56.1
A03p13940 Brassica napus HOM05D006454 ORTHO05D008024 4.2e-85 319.7 490 62.0
BcaC01g06383 Brassica carinata HOM05D006454 ORTHO05D008024 7.1e-85 318.9 482 62.4
Sabra11G0073300 Salix brachista HOM05D006454 ORTHO05D008024 7.1e-85 318.9 523 62.9
BolC3t14060H Brassica oleracea HOM05D006454 ORTHO05D008024 9.3e-85 318.5 479 62.8
Aqoxy4G02215 Aquilegia oxysepala HOM05D006454 ORTHO05D008024 1.6e-84 317.8 479 66.2
AT5G55580 Arabidopsis thaliana HOM05D006454 ORTHO05D008024 4.6e-84 316.2 482 62.2
Actinidia05032 Actinidia chinensis HOM05D006454 ORTHO05D008024 6.0e-84 315.8 522 63.0
Oeu054328.1 Olea europaea HOM05D006454 ORTHO05D008024 7.9e-84 315.5 514 62.5
Medtr5g094610 Medicago truncatula HOM05D006454 ORTHO05D008024 1.8e-83 314.3 535 59.6
Phvul.008G275700 Phaseolus vulgaris HOM05D006454 ORTHO05D008024 1.8e-83 314.3 476 64.9
MBI16_g11566_MAGBIO Magnolia biondii HOM05D006454 ORTHO05D008024 2.3e-83 313.9 486 62.3
DCAR_013215 Daucus carota HOM05D006454 ORTHO05D008024 3.0e-83 313.5 486 61.9
TAR626G0559 Trochodendron aralioides HOM05D006454 ORTHO05D008024 5.1e-83 312.8 485 63.1
Thhalv10013311m.g Eutrema salsugineum HOM05D006454 ORTHO05D008024 8.7e-83 312.0 498 51.0
Sabra11G0078800 Salix brachista HOM05D006454 ORTHO05D008024 8.7e-83 312.0 523 62.3
Cc05_g14700 Coffea canephora HOM05D006454 ORTHO05D008024 1.9e-82 310.8 485 64.3
PSO541G2941 Papaver somniferum HOM05D006454 ORTHO05D008024 1.9e-82 310.8 480 65.6
MSTRG.6985 Avicennia marina HOM05D006454 ORTHO05D008024 5.6e-82 309.3 480 66.9
Migut.M01675 Erythranthe guttata HOM05D006454 ORTHO05D008024 5.6e-82 309.3 476 58.8
LjContig00272g0005215 Lotus japonicus HOM05D006454 ORTHO05D008024 2.8e-81 307.0 471 66.5
SalBow8G0989 Salvia bowleyana HOM05D006454 ORTHO05D008024 2.8e-81 307.0 514 58.6
Lsat_1_v5_gn_5_8060 Lactuca sativa HOM05D006454 ORTHO05D008024 4.8e-81 306.2 509 63.1
PSO675G2716 Papaver somniferum HOM05D006454 ORTHO05D008024 1.1e-80 305.1 482 64.9
TPR.G14154 Trifolium pratense HOM05D006454 ORTHO05D008024 1.8e-80 304.3 490 61.4
CiPaw.12G136000 Carya illinoinensis HOM05D006454 ORTHO05D008024 1.3e-78 298.1 523 55.8
Nitab4.5_0002517g0040 Nicotiana tabacum HOM05D006454 ORTHO05D008024 2.9e-78 297.0 508 62.8
HanXRQChr08g0235811 Helianthus annuus HOM05D006454 ORTHO05D008024 4.9e-78 296.2 478 58.8
CARHR268890 Cardamine hirsuta HOM05D006454 ORTHO05D008024 2.7e-76 290.4 358 74.6
AUR62017060 Chenopodium quinoa HOM05D006454 ORTHO05D008024 1.0e-75 288.5 473 64.9
GSVIVG01037780001 Vitis vinifera HOM05D006454 ORTHO05D008024 3.0e-75 287.0 443 67.7
Nitab4.5_0000163g0310 Nicotiana tabacum HOM05D006454 ORTHO05D008024 3.9e-75 286.6 485 57.9
CSS0002313 Camellia sinensis var. sinensis HOM05D006454 ORTHO05D000036 5.1e-75 286.2 492 57.5
Ca_06374_v3 Cicer arietinum L. HOM05D006454 ORTHO05D000136 8.7e-75 285.4 420 65.7
AUR62040658 Chenopodium quinoa HOM05D006454 ORTHO05D008024 2.5e-74 283.9 491 60.1
PGR031G1939 Punica granatum HOM05D006454 ORTHO05D008024 3.3e-74 283.5 528 59.5
Psat2g008800 Pisum sativum HOM05D006454 ORTHO05D008024 5.3e-72 276.2 469 63.3
Solyc12g015640.2 Solanum lycopersicum HOM05D006454 ORTHO05D008024 1.5e-71 274.6 502 56.4
CDE12G0728 Ceratophyllum demersum HOM05D006454 ORTHO05D008024 7.6e-71 272.3 486 59.7
Peaxi162Scf00955g00214 Petunia axillaris HOM05D006454 ORTHO05D008024 2.2e-70 270.8 504 57.1
SGA_v2.0_scaffold171G38887 Striga asiatica HOM05D006454 ORTHO05D008024 6.5e-70 269.2 494 60.3
vmacro11560 Vaccinium macrocarpon HOM05D006454 ORTHO05D008024 9.3e-69 265.4 388 67.8
Lj1A885G30 Lonicera japonica HOM05D006454 ORTHO05D008024 3.5e-68 263.5 421 63.2
COL.COLO4_09787 Corchorus olitorius HOM05D006454 ORTHO05D008024 4.6e-68 263.1 484 61.8
ATR1149G086 Amborella trichopoda HOM05D006454 ORTHO05D008024 6.0e-68 262.7 474 58.0
CAN.G1239.14 Capsicum annuum HOM05D006454 ORTHO05D008024 3.9e-67 260.0 492 56.9
EL10Ac4g07613 Beta vulgaris HOM05D006454 ORTHO05D008024 8.7e-67 258.8 473 62.6
Ah.04g166440 Amaranthus hybridus HOM05D006454 ORTHO05D008024 1.1e-66 258.5 543 56.4
Sopen12g007540 Solanum pennellii HOM05D006454 ORTHO05D008024 4.3e-66 256.5 501 55.1
Rhsim06G0226800 Rhododendron simsii HOM05D006454 ORTHO05D008024 1.2e-63 248.4 544 50.7
HPP92_007883 Vanilla planifolia HOM05D006454 ORTHO05D008024 1.4e-61 241.5 489 60.7
Actinidia00093 Actinidia chinensis HOM05D006454 ORTHO05D008024 7.2e-61 239.2 457 62.4
Dinv40835 Davidia involucrata HOM05D006454 ORTHO05D008024 2.1e-60 237.7 292 79.8
Sc16g0003560 Simmondsia chinensis HOM05D006454 ORTHO05D008024 1.4e-51 208.4 363 60.6
Oeu031063.1 Olea europaea HOM05D006454 ORTHO05D008024 2.8e-49 200.7 292 80.8
PGSC0003DMG401029813 Solanum tuberosum HOM05D006454 ORTHO05D008024 1.3e-46 191.8 292 74.0
Cpa.g.sc12.193 Carica papaya HOM05D006454 ORTHO05D008024 3.2e-45 187.2 281 45.9
Hund01917 Selenicereus undatus HOM05D006454 ORTHO05D008024 4.2e-45 186.8 367 60.5
CAN.G489.2 Capsicum annuum HOM05D006454 ORTHO05D008024 5.5e-45 186.4 299 54.5
Zm00001eb107900 Zea mays HOM05D006454 ORTHO05D008024 1.8e-43 181.4 478 56.9
HPP92_007898 Vanilla planifolia HOM05D006454 ORTHO05D008024 5.2e-43 179.9 290 79.3
Os07g0583200 Oryza sativa ssp. japonica HOM05D006454 ORTHO05D008024 8.8e-43 179.1 485 54.2
Prupe.4G234100 Prunus persica HOM05D006454 ORTHO05D008024 3.3e-42 177.2 138 88.4
Hund01916 Selenicereus undatus HOM05D006454 ORTHO05D008024 3.0e-35 154.1 502 28.7
BcaNung06723 Brassica carinata HOM05D000081 ORTHO05D008024 7.7e-31 139.4 338 41.4
unitig_899.g15274 Utricularia gibba HOM05D006454 ORTHO05D008024 5.0e-30 136.7 92 70.7
Nn1g07440 Nelumbo nucifera HOM05D006454 ORTHO05D008024 7.2e-29 132.9 92 88.0
Cpa.g.sc12.192 Carica papaya HOM05D006454 ORTHO05D008024 3.6e-28 130.6 119 68.9
BolC2t07758H Brassica oleracea HOM05D006454 ORTHO05D008024 2.0e-26 124.8 125 51.2
SEGI_11937 Sequoiadendron giganteum HOM05D047912 ORTHO05D008024 1.1e-21 109.0 348 54.6
Pp3c7_3780 Physcomitrium patens HOM05D006454 ORTHO05D008024 1.2e-20 105.5 319 61.1
Mapoly0042s0040 Marchantia polymorpha HOM05D006454 ORTHO05D008024 2.6e-18 97.8 325 55.1
BcaNung06724 Brassica carinata HOM05D006454 ORTHO05D008024 7.5e-18 96.3 54 81.5
Pp3c11_22990 Physcomitrium patens HOM05D006454 ORTHO05D008024 1.2e-15 89.0 529 40.6
vmacro10144 Vaccinium macrocarpon HOM05D006454 ORTHO05D008024 5.6e-13 80.1 281 26.7
AagrBONN_evm.TU.Sc2ySwM_117.1902 Anthoceros agrestis HOM05D006454 ORTHO05D008024 2.3e-11 74.7 291 26.5
Oeu034554.1 Olea europaea HOM05D006454 ORTHO05D008024 2.3e-06 58.2 114 36.0


User provided reference genes

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