Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G2077 Cannabis sativa HOM05D007669 ORTHO05D009624 0.0e+00 1539.2 766 100.0
Cfa013482 Carpinus fangiana HOM05D007669 ORTHO05D009624 5.1e-217 758.4 794 53.4
MD13G1236300 Malus domestica HOM05D007669 ORTHO05D009624 1.7e-207 726.9 753 52.7
Dinv25484 Davidia involucrata HOM05D007669 ORTHO05D009624 3.2e-203 712.6 800 51.2
RcHm_v2.0_Chr4g0398451 Rosa chinensis HOM05D007669 ORTHO05D009624 1.1e-198 697.6 778 50.3
FAN07G2841 Fragaria x ananassa HOM05D007669 ORTHO05D009624 9.1e-198 694.5 750 51.2
Ciclev10007518m.g Citrus clementina HOM05D007669 ORTHO05D009624 2.7e-194 682.9 756 51.3
FAN17G0559 Fragaria x ananassa HOM05D007669 ORTHO05D009624 3.6e-194 682.6 750 50.5
Potri.018G133300 Populus trichocarpa HOM05D007669 ORTHO05D009624 2.3e-193 679.9 733 51.3
QL11p009976 Quercus lobata HOM05D007669 ORTHO05D009624 2.3e-193 679.9 911 46.8
Sabra18G0113000 Salix brachista HOM05D007669 ORTHO05D009624 8.3e-191 671.4 750 50.0
TWI34G1867 Tripterygium wilfordii HOM05D007669 ORTHO05D009624 5.9e-189 665.2 751 51.0
GSVIVG01029262001 Vitis vinifera HOM05D007669 ORTHO05D009624 2.9e-188 662.9 778 49.6
Manes.14G174400 Manihot esculenta HOM05D007669 ORTHO05D009624 4.7e-186 655.6 793 49.4
Gohir.D05G246300 Gossypium hirsutum HOM05D007669 ORTHO05D009624 1.8e-185 653.7 731 49.9
Gorai.009G262500 Gossypium raimondii HOM05D007669 ORTHO05D009624 2.3e-185 653.3 731 49.7
arahy.Tifrunner.gnm1.ann1.BQQL35 Arachis hypogaea HOM05D007669 ORTHO05D009624 3.0e-185 652.9 752 49.1
Lj4g0015120 Lotus japonicus HOM05D007669 ORTHO05D009624 4.4e-184 649.0 759 49.1
TPR.G5403 Trifolium pratense HOM05D007669 ORTHO05D009624 8.3e-183 644.8 761 49.0
Gohir.A05G248100 Gossypium hirsutum HOM05D007669 ORTHO05D009624 1.1e-182 644.4 730 49.5
arahy.Tifrunner.gnm1.ann1.YI9GDS Arachis hypogaea HOM05D007669 ORTHO05D009624 3.1e-182 642.9 748 48.8
Prupe.1G068100 Prunus persica HOM05D007669 ORTHO05D009624 5.4e-182 642.1 596 56.0
PGR044G0001 Punica granatum HOM05D007669 ORTHO05D009624 1.2e-181 641.0 761 47.8
Lalb_Chr07g0180781 Lupinus albus HOM05D007669 ORTHO05D009624 1.9e-179 633.6 796 47.1
Sed0018351 Sechium edule HOM05D007669 ORTHO05D009624 4.3e-179 632.5 743 49.0
Medtr4g126780 Medicago truncatula HOM05D007669 ORTHO05D009624 5.6e-179 632.1 740 49.7
Rhsim01G0007900 Rhododendron simsii HOM05D007669 ORTHO05D009624 1.2e-178 630.9 792 47.9
Phvul.003G138500 Phaseolus vulgaris HOM05D007669 ORTHO05D009624 3.1e-177 626.3 787 47.4
Duzib177G0349 Durio zibethinus HOM05D007669 ORTHO05D009624 3.4e-176 622.9 747 49.5
ClCG06G013870 Citrullus lanatus HOM05D007669 ORTHO05D009624 5.8e-176 622.1 750 49.1
Ca_21270_v3 Cicer arietinum L. HOM05D007669 ORTHO05D009624 1.7e-175 620.5 839 45.1
Nn8g40420 Nelumbo nucifera HOM05D007669 ORTHO05D009624 9.2e-174 614.8 776 46.8
Migut.K00227 Erythranthe guttata HOM05D007669 ORTHO05D009624 1.9e-171 607.1 786 46.2
FAN22G2123 Fragaria x ananassa HOM05D007669 ORTHO05D009624 3.4e-168 596.3 609 52.1
Cc06_g12900 Coffea canephora HOM05D007669 ORTHO05D009624 2.2e-167 593.6 812 45.4
Lj2g0020468 Lotus japonicus HOM05D007669 ORTHO05D009624 2.4e-166 590.1 752 46.7
Oeu025206.1 Olea europaea HOM05D007669 ORTHO05D009624 2.5e-163 580.1 710 47.0
Lsat_1_v5_gn_7_54021 Lactuca sativa HOM05D007669 ORTHO05D009624 1.7e-159 567.4 732 45.6
Cpa.g.sc115.51 Carica papaya HOM05D007669 ORTHO05D009624 2.9e-159 566.6 707 47.0
CiPaw.08G030700 Carya illinoinensis HOM05D007669 ORTHO05D009624 1.9e-158 563.9 591 53.8
SalBow1G4073 Salvia bowleyana HOM05D007669 ORTHO05D009624 5.4e-158 562.4 755 44.2
HanXRQChr09g0244441 Helianthus annuus HOM05D007669 ORTHO05D009624 2.7e-157 560.1 755 43.2
Hund06703 Selenicereus undatus HOM05D007669 ORTHO05D009624 3.3e-155 553.1 820 42.2
Ah.09g232160 Amaranthus hybridus HOM05D007669 ORTHO05D009624 1.6e-154 550.8 754 43.4
EL10Ac8g19326 Beta vulgaris HOM05D007669 ORTHO05D009624 1.8e-153 547.4 754 42.6
Sc13g0008100 Simmondsia chinensis HOM05D007669 ORTHO05D009624 5.2e-153 545.8 758 43.4
SGA_v2.0_scaffold17G07944 Striga asiatica HOM05D007669 ORTHO05D009624 1.2e-152 544.7 740 44.5
AUR62031310 Chenopodium quinoa HOM05D007669 ORTHO05D009624 4.9e-151 539.3 752 41.5
PSO063G2993 Papaver somniferum HOM05D007669 ORTHO05D009624 7.1e-150 535.4 775 43.0
PSO170G1866 Papaver somniferum HOM05D007669 ORTHO05D009624 3.5e-149 533.1 772 43.0
Aqoxy7G02932 Aquilegia oxysepala HOM05D007669 ORTHO05D009624 1.7e-148 530.8 776 44.1
FvH4_4g06530 Fragaria vesca HOM05D007669 ORTHO05D009624 1.7e-148 530.8 548 51.8
vmacro13101 Vaccinium macrocarpon HOM05D007669 ORTHO05D009624 3.6e-146 523.1 740 45.0
MELO3C017409.2 Cucumis melo HOM05D007669 ORTHO05D009624 1.7e-143 514.2 679 47.0
VMungo1215G2771 Vigna mungo HOM05D007669 ORTHO05D009624 3.5e-141 506.5 947 37.0
Glyma.17G056500 Glycine max HOM05D007669 ORTHO05D009624 3.3e-139 500.0 589 49.1
Psat4g013920 Pisum sativum HOM05D007669 ORTHO05D009624 1.3e-135 488.0 574 49.7
ATR0580G240 Amborella trichopoda HOM05D007669 ORTHO05D009624 1.4e-129 468.0 806 38.8
ECA240G0205 Erigeron canadensis HOM05D007669 ORTHO05D009624 3.1e-129 466.8 672 42.3
Eucgr.D01099 Eucalyptus grandis HOM05D007669 ORTHO05D009624 2.0e-128 464.2 531 48.4
Hma1.2p1_0726F.1_g208990 Hydrangea macrophylla HOM05D007669 ORTHO05D009624 1.0e-116 425.2 544 47.2
Zm00001eb432590 Zea mays HOM05D007669 ORTHO05D009624 1.9e-115 421.0 724 37.7
MBI16_g09333_MAGBIO Magnolia biondii HOM05D007669 ORTHO05D009624 4.5e-112 409.8 573 44.3
Eucgr.D01111 Eucalyptus grandis HOM05D007669 ORTHO05D009624 1.7e-103 381.3 698 36.8
CsaV3_1G032070 Cucumis sativus L. HOM05D007669 ORTHO05D009624 6.5e-103 379.4 396 53.3
AUR62027394 Chenopodium quinoa HOM05D007669 ORTHO05D009624 8.8e-100 369.0 437 43.9
HPP92_010780 Vanilla planifolia HOM05D007669 ORTHO05D009624 1.1e-97 362.1 487 43.5
DCAR_017992 Daucus carota HOM05D007669 ORTHO05D009624 1.0e-95 355.5 484 42.6
Eucgr.L01386 Eucalyptus grandis HOM05D007669 ORTHO05D009624 2.2e-95 354.4 392 48.7
Glyma.13G102601 Glycine max HOM05D007669 ORTHO05D009624 6.3e-90 336.3 440 44.8
CDE02G1706 Ceratophyllum demersum HOM05D007669 ORTHO05D009624 1.6e-80 305.1 747 31.5
SEGI_13081 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 2.2e-79 301.2 591 34.7
Pp3c9_5530 Physcomitrium patens HOM05D007669 ORTHO05D009624 1.0e-71 275.8 820 29.8
AagrBONN_evm.TU.Sc2ySwM_117.3295 Anthoceros agrestis HOM05D007669 ORTHO05D009624 1.8e-68 265.0 774 29.1
Mapoly0147s0035 Marchantia polymorpha HOM05D007669 ORTHO05D009624 9.2e-65 252.7 844 26.2
SMO356G0293 Selaginella moellendorffii HOM05D007669 ORTHO05D009624 2.0e-59 235.0 387 39.3
SEGI_05703 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 7.5e-59 233.0 476 33.8
FAN12G2799 Fragaria x ananassa HOM05D007669 ORTHO05D009624 9.8e-59 232.6 246 50.4
Haze_22064 Corylus avellana HOM05D007669 ORTHO05D009624 3.7e-42 177.6 203 49.3
Eucgr.D01101 Eucalyptus grandis HOM05D007669 ORTHO05D009624 8.6e-39 166.4 207 47.3
Psat7g062600 Pisum sativum HOM05D007669 ORTHO05D009624 2.8e-37 161.4 140 58.6
Glyma.13G102550 Glycine max HOM05D007669 ORTHO05D009624 8.9e-36 156.4 281 38.4
COL.COLO4_25058 Corchorus olitorius HOM05D007669 ORTHO05D009624 2.7e-32 144.8 164 47.0
DCAR_017991 Daucus carota HOM05D007669 ORTHO05D009624 7.3e-30 136.7 200 40.5
Haze_22063 Corylus avellana HOM05D007669 ORTHO05D009624 3.4e-27 127.9 161 54.0
Lj3A156T43 Lonicera japonica HOM05D007669 ORTHO05D009624 2.7e-16 91.7 170 41.2
COL.COLO4_25059 Corchorus olitorius HOM05D007669 ORTHO05D009624 3.5e-16 91.3 143 42.0
Cre07.g356600 Chlamydomonas reinhardtii HOM05D007669 ORTHO05D009624 1.3e-13 82.8 267 26.2
Psat4g139360 Pisum sativum HOM05D007669 ORTHO05D009624 8.1e-13 80.1 58 63.8
SEGI_25409 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 5.3e-12 77.4 236 28.0
PRCOL_00001814 Prasinoderma coloniale HOM05D007669 ORTHO05D009624 2.6e-11 75.1 140 37.9
PRCOL_00006584 Prasinoderma coloniale HOM05D024043 ORTHO05D009624 2.6e-11 75.1 123 38.2
MCO10G383 Micromonas commoda HOM05D024043 ORTHO05D009624 5.8e-11 73.9 121 38.0
Pp3c25_1540 Physcomitrium patens HOM05D024043 ORTHO05D031244 1.1e-09 69.7 106 37.7
Mapoly0004s0046 Marchantia polymorpha HOM05D024043 ORTHO05D031244 5.5e-09 67.4 119 37.0
AagrBONN_evm.TU.Sc2ySwM_369.230 Anthoceros agrestis HOM05D024043 ORTHO05D031244 9.3e-09 66.6 105 34.3
CiPaw.08G030600 Carya illinoinensis HOM05D007669 ORTHO05D009624 2.7e-08 65.1 69 43.5
Os04g0659150 Oryza sativa ssp. japonica HOM05D007669 ORTHO05D009624 3.5e-08 64.7 137 31.4
HPP92_010781 Vanilla planifolia HOM05D007669 ORTHO05D009624 5.7e-06 57.4 70 44.3


User provided reference genes

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