Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G2057 Cannabis sativa HOM05D005849 ORTHO05D004704 3.7e-118 428.3 233 100.0
Duzib213G0789 Durio zibethinus HOM05D005849 ORTHO05D004704 3.9e-19 99.4 251 41.0
CiPaw.11G203200 Carya illinoinensis HOM05D005849 ORTHO05D004704 4.4e-18 95.9 252 39.7
Sabra16G0240400 Salix brachista HOM05D005849 ORTHO05D004704 5.7e-18 95.5 242 38.4
Prupe.4G242400 Prunus persica HOM05D005849 ORTHO05D004704 2.2e-17 93.6 172 41.9
QL08p004345 Quercus lobata HOM05D005849 ORTHO05D004704 6.3e-17 92.0 242 39.7
QL11p054311 Quercus lobata HOM05D005849 ORTHO05D004704 6.3e-17 92.0 242 39.7
Potri.001G367100 Populus trichocarpa HOM05D005849 ORTHO05D004704 8.2e-17 91.7 246 38.6
Ciclev10009298m.g Citrus clementina HOM05D005849 ORTHO05D004704 1.4e-16 90.9 264 34.5
CiPaw.12G137700 Carya illinoinensis HOM05D005849 ORTHO05D004704 1.7e-14 84.0 256 37.1
Gohir.A01G091100 Gossypium hirsutum HOM05D005849 ORTHO05D004704 2.9e-14 83.2 234 36.3
Manes.15G060700 Manihot esculenta HOM05D005849 ORTHO05D004704 4.2e-13 79.3 235 34.5
Duzib138G1177 Durio zibethinus HOM05D005849 ORTHO05D004704 5.5e-13 79.0 256 35.9
TWI38G0138 Tripterygium wilfordii HOM05D005849 ORTHO05D004704 7.2e-13 78.6 229 35.4
TAR629G2787 Trochodendron aralioides HOM05D005849 ORTHO05D004704 9.4e-13 78.2 136 47.1
Manes.03G140566 Manihot esculenta HOM05D005849 ORTHO05D004704 1.2e-12 77.8 237 32.9
Sabra14G0127500 Salix brachista HOM05D005849 ORTHO05D004704 1.2e-12 77.8 252 35.7
Gorai.002G099600 Gossypium raimondii HOM05D005849 ORTHO05D004704 3.6e-12 76.3 236 36.4
Manes.03G140700 Manihot esculenta HOM05D005849 ORTHO05D004704 4.7e-12 75.9 238 34.0
Dinv26604 Davidia involucrata HOM05D005849 ORTHO05D004704 8.0e-12 75.1 242 36.4
Thecc.07G014700 Theobroma cacao HOM05D005849 ORTHO05D004704 4.0e-11 72.8 248 34.3
Lj8P178T38 Lonicera japonica HOM05D005849 ORTHO05D004704 8.8e-11 71.6 114 50.9
MD09G1126800 Malus domestica HOM05D005849 ORTHO05D004704 8.8e-11 71.6 236 34.7
Lj8P136T22 Lonicera japonica HOM05D005849 ORTHO05D004704 5.7e-10 68.9 239 36.0
QL04p068477 Quercus lobata HOM05D005849 ORTHO05D004704 9.7e-10 68.2 242 35.1
Potri.014G167700 Populus trichocarpa HOM05D005849 ORTHO05D004704 1.7e-09 67.4 252 34.9
Psat5g104280 Pisum sativum HOM05D005849 ORTHO05D004704 2.8e-09 66.6 91 51.6
TPR.G35904 Trifolium pratense HOM05D005849 ORTHO05D004704 2.8e-09 66.6 227 32.2
Prupe.3G197400 Prunus persica HOM05D005849 ORTHO05D004704 4.8e-09 65.9 255 32.9
Medtr3g082780 Medicago truncatula HOM05D005849 ORTHO05D004704 6.3e-09 65.5 80 51.2
Medtr5g098480 Medicago truncatula HOM05D005849 ORTHO05D004704 6.3e-09 65.5 167 34.7
Haze_09816 Corylus avellana HOM05D005849 ORTHO05D004704 8.2e-09 65.1 159 40.9
Rhsim06G0176600 Rhododendron simsii HOM05D005849 ORTHO05D004704 8.2e-09 65.1 225 37.3
Manes.12G064702 Manihot esculenta HOM05D005849 ORTHO05D004704 1.4e-08 64.3 112 43.8
Nn1g07503 Nelumbo nucifera HOM05D005849 ORTHO05D004704 1.4e-08 64.3 143 39.2
Cfa014225 Carpinus fangiana HOM05D005849 ORTHO05D004704 1.8e-08 63.9 242 32.6
Haze_12628 Corylus avellana HOM05D005849 ORTHO05D004704 1.8e-08 63.9 237 33.8
Cc03_g07410 Coffea canephora HOM05D005849 ORTHO05D004704 2.4e-08 63.5 138 39.1
COL.COLO4_19617 Corchorus olitorius HOM05D005849 ORTHO05D004704 4.1e-08 62.8 256 31.6
Duzib133G0645 Durio zibethinus HOM05D005849 ORTHO05D004704 4.1e-08 62.8 247 34.0
MD17G1117100 Malus domestica HOM05D005849 ORTHO05D004704 4.1e-08 62.8 158 38.6
Cfa020199 Carpinus fangiana HOM05D005849 ORTHO05D004704 7.0e-08 62.0 215 37.2
Gohir.A07G169800 Gossypium hirsutum HOM05D005849 ORTHO05D004704 7.0e-08 62.0 241 35.3
Manes.13G061900 Manihot esculenta HOM05D005849 ORTHO05D004704 7.0e-08 62.0 241 35.7
Phvul.006G056700 Phaseolus vulgaris HOM05D005849 ORTHO05D004704 1.6e-07 60.8 262 31.3
TPR.G11064 Trifolium pratense HOM05D005849 ORTHO05D004704 1.6e-07 60.8 86 51.2
TAR629G2911 Trochodendron aralioides HOM05D005849 ORTHO05D004704 1.6e-07 60.8 231 35.5
TWI36G1699 Tripterygium wilfordii HOM05D005849 ORTHO05D004704 2.0e-07 60.5 238 31.1
Gohir.A07G192100 Gossypium hirsutum HOM05D005849 ORTHO05D004704 2.7e-07 60.1 236 33.1
MBI19_g14891_MAGBIO Magnolia biondii HOM05D005849 ORTHO05D004704 3.5e-07 59.7 77 46.8
Lalb_Chr15g0082031 Lupinus albus HOM05D005849 ORTHO05D004704 4.5e-07 59.3 133 43.6
Cpa.g.sc12.153 Carica papaya HOM05D005849 ORTHO05D004704 5.9e-07 58.9 246 35.4
Gohir.D07G198400 Gossypium hirsutum HOM05D005849 ORTHO05D004704 5.9e-07 58.9 228 32.9
Gorai.001G222200 Gossypium raimondii HOM05D005849 ORTHO05D004704 5.9e-07 58.9 228 32.5
Thecc.01G196200 Theobroma cacao HOM05D005849 ORTHO05D004704 5.9e-07 58.9 249 32.9
Gohir.D01G076400 Gossypium hirsutum HOM05D005849 ORTHO05D004704 1.0e-06 58.2 225 32.0
Gohir.D07G171100 Gossypium hirsutum HOM05D005849 ORTHO05D004704 1.0e-06 58.2 233 34.3
Gorai.001G191400 Gossypium raimondii HOM05D005849 ORTHO05D004704 1.3e-06 57.8 232 34.1
MBI16_g22138_MAGBIO Magnolia biondii HOM05D005849 ORTHO05D004704 1.3e-06 57.8 259 33.6
Aqoxy4G02338 Aquilegia oxysepala HOM05D005849 ORTHO05D004704 1.7e-06 57.4 239 33.9
Glyma.20G062100 Glycine max HOM05D005849 ORTHO05D004704 1.7e-06 57.4 139 36.0
Lalb_Chr10g0107651 Lupinus albus HOM05D005849 ORTHO05D004704 2.9e-06 56.6 230 34.3
Psat2g002880 Pisum sativum HOM05D005849 ORTHO05D004704 2.9e-06 56.6 119 41.2
VMungo0540G2501 Vigna mungo HOM05D005849 ORTHO05D004704 2.9e-06 56.6 93 46.2
Ca_06483_v3 Cicer arietinum L. HOM05D005849 ORTHO05D004704 3.8e-06 56.2 184 32.1
Actinidia07866 Actinidia chinensis HOM05D005849 ORTHO05D004704 5.0e-06 55.8 213 34.3
arahy.Tifrunner.gnm1.ann1.715EVP Arachis hypogaea HOM05D005849 ORTHO05D004704 5.0e-06 55.8 209 32.5
Dinv10326 Davidia involucrata HOM05D005849 ORTHO05D004704 5.0e-06 55.8 222 31.5
Nitab4.5_0000006g0660 Nicotiana tabacum HOM05D005849 ORTHO05D004704 5.0e-06 55.8 251 30.7
Actinidia18832 Actinidia chinensis HOM05D005849 ORTHO05D004704 6.5e-06 55.5 113 38.9
TPR.G8608 Trifolium pratense HOM05D014115 ORTHO05D015996 6.5e-06 55.5 126 42.1
arahy.Tifrunner.gnm1.ann1.UTL0P7 Arachis hypogaea HOM05D005849 ORTHO05D004704 8.5e-06 55.1 146 37.7


User provided reference genes

Program Settings