Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G2008 Cannabis sativa HOM05D000125 ORTHO05D010101 1.3e-207 726.1 354 100.0
CANSAT11G2153 Cannabis sativa HOM05D000125 ORTHO05D010101 3.8e-130 468.8 337 73.0
CANSAT11G2639 Cannabis sativa HOM05D000125 ORTHO05D010101 1.6e-75 287.3 316 46.5
CANSAT54G0137 Cannabis sativa HOM05D000125 ORTHO05D000120 3.7e-69 266.2 323 47.1
CANSAT11G0949 Cannabis sativa HOM05D000125 ORTHO05D010101 1.1e-68 264.6 337 45.4
CANSAT11G0780 Cannabis sativa HOM05D000125 ORTHO05D010101 7.0e-68 261.9 347 44.1
CANSAT11G0087 Cannabis sativa HOM05D000125 ORTHO05D000120 8.0e-64 248.4 265 52.5
CANSAT11G2064 Cannabis sativa HOM05D000125 ORTHO05D010101 6.8e-47 192.2 217 44.7
CANSAT21G1400 Cannabis sativa HOM05D000125 ORTHO05D010101 7.0e-44 182.2 340 34.4
CANSAT21G1703 Cannabis sativa HOM05D000125 ORTHO05D000120 3.5e-43 179.9 345 34.5
CANSAT11G0593 Cannabis sativa HOM05D000125 ORTHO05D010101 9.2e-36 155.2 335 32.2
CANSAT11G0715 Cannabis sativa HOM05D000125 ORTHO05D000120 1.5e-33 147.9 331 32.9
CANSAT11G2286 Cannabis sativa HOM05D000125 ORTHO05D010101 3.3e-33 146.7 322 31.7
CANSAT11G0975 Cannabis sativa HOM05D000125 ORTHO05D000120 1.2e-27 128.3 82 73.2
CANSAT11G0646 Cannabis sativa HOM05D000125 ORTHO05D000120 4.0e-23 113.2 337 27.9
CANSAT11G1920 Cannabis sativa HOM05D000125 ORTHO05D000120 2.1e-19 100.9 314 26.8
CANSAT78G1599 Cannabis sativa HOM05D000125 ORTHO05D000120 4.6e-19 99.8 319 26.3
CANSAT01G1477 Cannabis sativa HOM05D000125 ORTHO05D010101 4.3e-17 93.2 301 24.9
Cfa016031 Carpinus fangiana HOM05D000125 ORTHO05D010101 5.6e-17 92.8 257 29.2
Haze_13413 Corylus avellana HOM05D000125 ORTHO05D010101 5.6e-17 92.8 335 26.0
Cfa016030 Carpinus fangiana HOM05D000125 ORTHO05D010101 1.2e-16 91.7 287 26.5
Cfa016027 Carpinus fangiana HOM05D009378 ORTHO05D010101 1.6e-16 91.3 313 26.2
Cfa013571 Carpinus fangiana HOM05D000125 ORTHO05D010101 4.7e-16 89.7 361 24.4
CANSAT11G1144 Cannabis sativa HOM05D000125 ORTHO05D010101 2.4e-15 87.4 338 25.4
QL09p024465 Quercus lobata HOM05D000125 ORTHO05D010101 2.4e-15 87.4 336 24.1
Haze_00404 Corylus avellana HOM05D000125 ORTHO05D010101 3.1e-15 87.0 287 26.1
Haze_14777 Corylus avellana HOM05D000125 ORTHO05D010101 1.5e-14 84.7 342 24.9
PGR031G1316 Punica granatum HOM05D000125 ORTHO05D010101 3.4e-14 83.6 331 26.0
QL05p062837 Quercus lobata HOM05D009378 ORTHO05D010101 4.4e-14 83.2 324 24.7
Cfa007320 Carpinus fangiana HOM05D000125 ORTHO05D010101 2.9e-13 80.5 340 24.7
CANSAT11G1594 Cannabis sativa HOM05D000125 ORTHO05D000120 6.4e-13 79.3 48 68.8
CiPaw.06G031800 Carya illinoinensis HOM05D000125 ORTHO05D010101 6.4e-13 79.3 323 26.6
Haze_00406 Corylus avellana HOM05D000125 ORTHO05D010101 2.4e-12 77.4 292 26.4
Eucgr.E00393 Eucalyptus grandis HOM05D000125 ORTHO05D000120 3.2e-12 77.0 311 26.7
Haze_00441 Corylus avellana HOM05D000125 ORTHO05D010101 2.7e-11 73.9 230 28.7
Cpa.g.sc623.3 Carica papaya HOM05D009378 ORTHO05D010101 7.8e-11 72.4 334 22.5
PGR102G3309 Punica granatum HOM05D000125 ORTHO05D010101 7.8e-11 72.4 323 25.4
QL09p028133 Quercus lobata HOM05D009378 ORTHO05D010101 1.0e-10 72.0 265 23.8
QL02p073603 Quercus lobata HOM05D000125 ORTHO05D010101 1.3e-10 71.6 333 23.4
Eucgr.E00385 Eucalyptus grandis HOM05D000125 ORTHO05D010101 5.1e-10 69.7 334 23.4
Cfa016029 Carpinus fangiana HOM05D009378 ORTHO05D010101 6.6e-10 69.3 206 27.2
QL09p024013 Quercus lobata HOM05D008014 ORTHO05D010101 8.7e-10 68.9 154 29.9
CSS0003795 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D010101 7.3e-09 65.9 249 26.9
Haze_00427 Corylus avellana HOM05D000125 ORTHO05D010101 2.4e-07 60.8 294 25.2
Ciclev10027597m.g Citrus clementina HOM05D000125 ORTHO05D000120 3.1e-07 60.5 238 23.5
PGR042G3408 Punica granatum HOM05D000125 ORTHO05D000120 3.1e-07 60.5 276 24.6
QL09p045403 Quercus lobata HOM05D000125 ORTHO05D010101 4.0e-07 60.1 184 28.8
QL93p0209_0016 Quercus lobata HOM05D009378 ORTHO05D010101 4.0e-07 60.1 206 26.2
CANSAT11G0875 Cannabis sativa HOM05D000125 ORTHO05D000807 9.0e-07 58.9 59 49.2
CANSAT35G0818 Cannabis sativa HOM05D000125 ORTHO05D000120 1.5e-06 58.2 36 63.9
CSS0003791 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 2.0e-06 57.8 212 26.9
CSS0032415 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 4.5e-06 56.6 102 32.4
CANSAT11G2453 Cannabis sativa HOM05D000125 ORTHO05D000120 4.5e-06 56.6 51 51.0
CSS0030731 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 5.8e-06 56.2 174 25.9
QL09p024175 Quercus lobata HOM05D009378 ORTHO05D010101 5.8e-06 56.2 206 25.7
QL09p024027 Quercus lobata HOM05D009378 ORTHO05D010101 7.6e-06 55.8 180 23.3
QL09p024149 Quercus lobata HOM05D009378 ORTHO05D010101 9.9e-06 55.5 298 25.8


User provided reference genes

Program Settings