Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 1.6e-157 559.3 273 100.0
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 1.6e-91 340.1 254 66.1
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 2.1e-88 329.7 263 63.1
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 3.7e-85 318.9 261 62.1
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 4.8e-85 318.5 253 63.6
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 6.3e-85 318.2 253 62.1
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 6.3e-85 318.2 253 62.1
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 1.8e-84 316.6 257 62.6
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 5.4e-84 315.1 251 61.8
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 9.1e-84 314.3 251 62.9
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 5.9e-83 311.6 251 61.0
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 1.1e-81 307.4 262 58.4
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 3.3e-81 305.8 255 60.8
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 3.3e-81 305.8 267 58.4
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 4.2e-81 305.4 251 60.6
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 2.8e-80 302.8 265 59.2
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 6.1e-80 301.6 252 59.9
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 6.8e-79 298.1 266 57.9
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 1.2e-78 297.4 254 58.7
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 1.5e-78 297.0 265 57.4
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 2.0e-78 296.6 264 60.6
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 9.8e-78 294.3 251 57.8
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 2.8e-77 292.7 255 58.4
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 6.3e-77 291.6 254 58.3
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 6.3e-77 291.6 254 57.5
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 1.1e-76 290.8 254 58.3
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 1.4e-76 290.4 255 60.0
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 2.4e-76 289.7 255 56.5
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 2.4e-76 289.7 251 57.8
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 2.4e-76 289.7 379 43.8
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 4.1e-76 288.9 255 59.2
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 2.7e-75 286.2 254 56.7
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 5.9e-75 285.0 251 58.2
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 7.8e-75 284.6 270 55.6
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 1.3e-74 283.9 260 55.0
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 3.3e-73 279.3 290 52.1
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 1.4e-71 273.9 254 56.3
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 3.1e-71 272.7 254 56.3
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 8.9e-71 271.2 234 59.0
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 1.2e-70 270.8 258 55.0
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 5.8e-70 268.5 258 55.0
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 8.3e-69 264.6 259 56.4
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 3.2e-68 262.7 250 54.8
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 9.2e-68 261.2 253 53.8
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 3.9e-66 255.8 251 53.8
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 5.0e-66 255.4 254 54.7
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 1.1e-65 254.2 192 64.1
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 1.1e-65 254.2 253 54.5
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 2.5e-65 253.1 314 45.5
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 5.6e-65 251.9 277 50.5
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 1.6e-64 250.4 253 54.2
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 4.7e-64 248.8 181 68.0
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 6.2e-64 248.4 221 57.5
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 1.1e-63 247.7 253 51.4
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 1.4e-63 247.3 257 54.1
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 1.5e-62 243.8 253 51.4
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 2.0e-62 243.4 271 51.3
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 5.8e-62 241.9 270 48.5
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 5.8e-62 241.9 252 51.2
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 2.2e-61 240.0 181 64.6
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 6.4e-61 238.4 256 52.0
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 1.4e-60 237.3 251 50.2
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 1.9e-60 236.9 269 49.4
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 3.2e-60 236.1 264 49.2
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 2.1e-59 233.4 271 48.7
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 4.6e-59 232.3 270 48.1
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 7.8e-59 231.5 254 51.2
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 1.0e-58 231.1 271 48.0
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 2.3e-58 229.9 271 47.6
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 2.3e-58 229.9 271 47.6
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 2.3e-58 229.9 271 47.6
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 5.1e-58 228.8 244 48.0
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 5.1e-58 228.8 270 49.3
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 1.9e-57 226.9 242 52.1
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 9.5e-57 224.6 262 48.1
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 2.1e-56 223.4 197 60.9
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 6.2e-56 221.9 334 43.4
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 1.1e-55 221.1 201 59.7
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 4.4e-54 215.7 288 44.1
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 5.8e-54 215.3 170 60.6
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 1.3e-53 214.2 238 45.4
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 1.1e-52 211.1 238 50.8
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 4.1e-52 209.1 242 46.7
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 5.6e-49 198.7 252 45.2
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 3.6e-48 196.1 200 53.0
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 6.2e-48 195.3 251 43.4
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 2.1e-43 180.3 261 45.6
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 2.7e-43 179.9 141 61.7
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 6.0e-43 178.7 258 44.6
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 6.6e-42 175.3 263 45.2
ATR0743G053 Amborella trichopoda HOM05D007415 ORTHO05D009324 4.9e-37 159.1 242 40.9
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 1.5e-33 147.5 148 52.7
Ca_15292_v3 Cicer arietinum L. HOM05D007415 ORTHO05D009324 1.9e-33 147.1 168 50.6
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 1.8e-26 124.0 181 43.1
TPR.G38565 Trifolium pratense HOM05D007415 ORTHO05D009324 3.9e-26 122.9 255 34.9
Mapoly0134s0003 Marchantia polymorpha HOM05D007415 ORTHO05D009324 1.4e-23 114.4 249 34.1
Pp3c1_28310 Physcomitrium patens HOM05D007415 ORTHO05D009324 6.9e-23 112.1 197 34.0
Ah.11g050670 Amaranthus hybridus HOM05D007415 ORTHO05D009324 2.5e-20 103.6 216 35.6
DCAR_017283 Daucus carota HOM05D007415 ORTHO05D009324 1.9e-17 94.0 135 40.0
SalBow2G2324 Salvia bowleyana HOM05D007415 ORTHO05D009324 4.8e-16 89.4 260 29.6
SMO356G0522 Selaginella moellendorffii HOM05D007415 ORTHO05D009324 2.4e-15 87.0 249 28.5
AagrBONN_evm.TU.Sc2ySwM_362.2902 Anthoceros agrestis HOM05D007415 ORTHO05D009324 3.1e-15 86.7 168 35.1
Zm00001eb288240 Zea mays HOM05D007415 ORTHO05D009324 6.9e-15 85.5 134 39.6
PGSC0003DMG400007530 Solanum tuberosum HOM05D007415 ORTHO05D009324 1.3e-13 81.3 74 55.4
TPR.G6328 Trifolium pratense HOM05D000001 ORTHO05D009753 3.4e-06 56.6 37 70.3


User provided reference genes

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