Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 5.6e-87 324.3 174 100.0
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 2.4e-82 308.9 175 94.9
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 5.5e-74 281.2 175 85.7
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 1.0e-72 276.9 172 83.1
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 1.3e-72 276.6 175 84.0
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 3.9e-72 275.0 175 83.4
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 6.7e-72 274.2 172 83.1
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 1.1e-71 273.5 175 82.3
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 1.9e-71 272.7 172 82.0
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 4.3e-71 271.6 172 80.8
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 5.7e-71 271.2 176 82.4
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 7.4e-71 270.8 172 81.4
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 2.2e-70 269.2 174 81.6
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 2.2e-70 269.2 176 79.5
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 2.8e-70 268.9 172 80.2
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 3.7e-70 268.5 178 79.2
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 3.7e-70 268.5 177 78.5
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 3.7e-70 268.5 174 81.6
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 6.3e-70 267.7 172 81.4
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 8.2e-70 267.3 176 81.2
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 8.2e-70 267.3 172 80.2
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 1.1e-69 266.9 174 80.5
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 1.1e-69 266.9 176 80.7
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.8e-69 266.2 173 83.2
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 1.8e-69 266.2 177 79.1
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 3.1e-69 265.4 172 76.7
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 3.1e-69 265.4 173 83.2
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 3.1e-69 265.4 173 82.1
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 5.3e-69 264.6 175 81.1
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 6.9e-69 264.2 172 78.5
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 6.9e-69 264.2 177 78.0
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 6.9e-69 264.2 174 79.9
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 9.0e-69 263.8 168 79.8
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 9.0e-69 263.8 174 80.5
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 9.0e-69 263.8 172 80.8
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 1.2e-68 263.5 172 75.0
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 1.2e-68 263.5 172 75.0
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.2e-68 263.5 174 79.9
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 1.2e-68 263.5 174 79.9
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 1.5e-68 263.1 176 76.1
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 1.5e-68 263.1 168 80.4
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 1.5e-68 263.1 164 82.9
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 2.0e-68 262.7 174 79.9
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 2.0e-68 262.7 174 79.9
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 2.0e-68 262.7 163 82.8
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 2.6e-68 262.3 177 76.8
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 3.4e-68 261.9 172 76.2
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 3.4e-68 261.9 175 78.9
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 4.5e-68 261.5 172 74.4
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 4.5e-68 261.5 172 74.4
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 4.5e-68 261.5 172 80.2
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 5.9e-68 261.2 157 84.1
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 7.6e-68 260.8 175 79.4
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 7.6e-68 260.8 164 81.1
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 1.0e-67 260.4 175 76.6
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 1.3e-67 260.0 178 75.8
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 1.3e-67 260.0 175 74.9
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.7e-67 259.6 174 78.7
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 1.7e-67 259.6 175 74.9
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 2.2e-67 259.2 178 75.3
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 2.2e-67 259.2 178 75.3
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 2.2e-67 259.2 178 75.3
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 2.9e-67 258.8 156 84.0
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 2.9e-67 258.8 175 77.7
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 3.8e-67 258.5 175 73.7
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 5.0e-67 258.1 176 79.0
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 5.0e-67 258.1 173 74.6
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 6.5e-67 257.7 175 74.9
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 8.5e-67 257.3 175 74.3
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 1.9e-66 256.1 173 74.0
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 1.9e-66 256.1 178 75.3
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 2.5e-66 255.8 173 78.6
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 3.2e-66 255.4 175 77.1
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 5.5e-66 254.6 173 75.1
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 7.2e-66 254.2 173 73.4
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 7.2e-66 254.2 173 76.3
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 9.3e-66 253.8 173 73.4
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 2.7e-65 252.3 177 75.1
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 2.7e-65 252.3 177 75.1
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 3.6e-65 251.9 178 74.2
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 3.6e-65 251.9 158 80.4
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 3.6e-65 251.9 177 75.1
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 1.0e-64 250.4 176 76.7
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 1.0e-64 250.4 162 82.1
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 1.8e-64 249.6 152 81.6
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 5.1e-64 248.1 164 76.8
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 8.7e-64 247.3 171 73.7
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 1.9e-63 246.1 172 73.3
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 1.9e-63 246.1 149 83.2
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 2.5e-63 245.7 146 85.6
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 5.7e-63 244.6 151 82.8
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 2.2e-62 242.7 151 80.8
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 2.2e-62 242.7 147 83.0
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 2.8e-62 242.3 175 74.9
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 3.7e-62 241.9 160 73.8
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 4.8e-62 241.5 161 77.0
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 1.1e-61 240.4 175 73.1
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 1.4e-61 240.0 153 77.8
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 5.3e-61 238.0 153 80.4
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 1.5e-60 236.5 151 79.5
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 4.5e-60 235.0 168 72.6
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.7e-59 233.0 155 81.9
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 1.1e-58 230.3 175 69.1
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 3.2e-58 228.8 177 68.9
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 2.1e-57 226.1 176 67.6
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 3.6e-57 225.3 137 80.3
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 1.0e-56 223.8 157 75.8
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 1.4e-53 213.4 120 91.7
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 1.8e-53 213.0 150 74.7
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 2.0e-52 209.5 131 81.7
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 4.5e-52 208.4 150 72.0
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 7.7e-52 207.6 120 90.0
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 3.6e-49 198.7 118 86.4
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 6.1e-49 198.0 152 69.1
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 1.1e-47 193.7 160 63.8
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 2.2e-46 189.5 151 62.3
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 3.7e-46 188.7 106 90.6
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 4.1e-45 185.3 108 88.0
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 2.0e-44 183.0 106 86.8
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 2.2e-43 179.5 119 76.5
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 8.5e-43 177.6 129 66.7
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 1.5e-42 176.8 150 60.0
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 1.0e-40 170.6 127 69.3
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 6.5e-35 151.4 89 84.3
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 1.3e-27 127.1 121 47.9
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.6e-17 93.6 106 54.7
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 3.5e-12 75.9 118 49.2


User provided reference genes

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