Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 3.4e-71 271.6 136 100.0
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 4.9e-30 134.8 100 71.0
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 8.4e-30 134.0 107 70.1
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 1.9e-29 132.9 105 68.6
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 5.5e-29 131.3 105 69.5
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 7.1e-29 131.0 100 66.0
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 9.3e-29 130.6 108 67.6
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 3.5e-28 128.6 105 68.6
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 7.9e-28 127.5 106 67.0
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 7.9e-28 127.5 106 67.0
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 1.0e-27 127.1 100 68.0
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 1.3e-27 126.7 102 66.7
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 1.8e-27 126.3 82 78.0
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 3.9e-27 125.2 106 64.2
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 5.1e-27 124.8 101 66.3
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 5.1e-27 124.8 105 62.9
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 6.7e-27 124.4 76 80.3
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 6.7e-27 124.4 100 67.0
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 6.7e-27 124.4 100 64.0
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 6.7e-27 124.4 100 61.0
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 8.7e-27 124.0 76 80.3
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 8.7e-27 124.0 100 68.0
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 1.1e-26 123.6 106 65.1
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 1.1e-26 123.6 100 66.0
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 1.1e-26 123.6 100 66.0
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 1.5e-26 123.2 107 66.4
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 2.5e-26 122.5 111 59.5
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 3.3e-26 122.1 106 64.2
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 3.3e-26 122.1 90 71.1
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 3.3e-26 122.1 105 62.9
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 4.3e-26 121.7 110 61.8
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 4.3e-26 121.7 101 67.3
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 4.3e-26 121.7 100 66.0
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 4.3e-26 121.7 105 63.8
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 5.7e-26 121.3 76 80.3
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 5.7e-26 121.3 103 63.1
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 7.4e-26 120.9 95 66.3
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 7.4e-26 120.9 105 64.8
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 7.4e-26 120.9 105 63.8
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 7.4e-26 120.9 89 74.2
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 7.4e-26 120.9 89 74.2
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 7.4e-26 120.9 89 74.2
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 9.7e-26 120.6 95 66.3
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 9.7e-26 120.6 86 74.4
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 1.3e-25 120.2 75 74.7
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 1.3e-25 120.2 101 65.3
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 1.6e-25 119.8 103 62.1
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 1.6e-25 119.8 108 61.1
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 1.6e-25 119.8 107 58.9
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 2.8e-25 119.0 111 64.0
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 2.8e-25 119.0 84 66.7
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 2.8e-25 119.0 100 63.0
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 3.7e-25 118.6 66 83.3
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 3.7e-25 118.6 100 67.0
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 4.8e-25 118.2 66 83.3
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 4.8e-25 118.2 68 76.5
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 4.8e-25 118.2 68 82.4
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 4.8e-25 118.2 81 72.8
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 6.3e-25 117.9 101 62.4
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 6.3e-25 117.9 106 60.4
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 6.3e-25 117.9 100 61.0
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 6.3e-25 117.9 123 52.8
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 1.1e-24 117.1 102 64.7
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 1.4e-24 116.7 102 61.8
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 1.4e-24 116.7 115 54.8
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 1.8e-24 116.3 102 61.8
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 3.1e-24 115.5 103 55.3
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 3.1e-24 115.5 67 79.1
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 6.9e-24 114.4 90 63.3
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 6.9e-24 114.4 75 73.3
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 9.0e-24 114.0 65 78.5
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 9.0e-24 114.0 98 60.2
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 9.0e-24 114.0 98 60.2
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 9.0e-24 114.0 104 60.6
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 9.0e-24 114.0 66 81.8
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 1.2e-23 113.6 66 81.8
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 1.5e-23 113.2 86 68.6
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 2.0e-23 112.8 69 72.5
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 2.0e-23 112.8 69 75.4
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 2.6e-23 112.5 65 76.9
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 2.6e-23 112.5 66 80.3
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 2.6e-23 112.5 105 61.0
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 3.4e-23 112.1 89 61.8
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 3.4e-23 112.1 102 60.8
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 3.4e-23 112.1 111 58.6
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 3.4e-23 112.1 80 73.8
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 4.5e-23 111.7 94 62.8
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 4.5e-23 111.7 82 64.6
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 5.9e-23 111.3 82 70.7
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 5.9e-23 111.3 66 77.3
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 5.9e-23 111.3 98 60.2
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 5.9e-23 111.3 66 77.3
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 5.9e-23 111.3 66 77.3
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 5.9e-23 111.3 66 77.3
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 5.9e-23 111.3 98 60.2
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 5.9e-23 111.3 66 77.3
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 5.9e-23 111.3 98 60.2
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 5.9e-23 111.3 66 77.3
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 5.9e-23 111.3 80 70.0
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 5.9e-23 111.3 76 72.4
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 7.6e-23 110.9 82 68.3
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 7.6e-23 110.9 76 71.1
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 1.0e-22 110.5 86 65.1
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 2.9e-22 109.0 75 66.7
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 3.8e-22 108.6 99 61.6
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 1.1e-21 107.1 64 78.1
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 3.2e-21 105.5 108 54.6
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 4.2e-21 105.1 74 67.6
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 4.2e-21 105.1 64 75.0
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 5.5e-21 104.8 70 74.3
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 7.2e-21 104.4 84 61.9
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 9.4e-21 104.0 77 64.9
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 1.6e-20 103.2 77 63.6
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 8.8e-19 97.4 63 66.7
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 1.5e-18 96.7 66 71.2
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.5e-18 96.7 66 71.2
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.5e-18 95.9 66 69.7
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.3e-18 95.5 66 71.2
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 9.7e-18 94.0 66 69.7
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 9.7e-18 94.0 66 69.7
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 1.1e-16 90.5 107 51.4
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 5.3e-16 88.2 52 71.2
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 9.1e-16 87.4 68 58.8
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 3.4e-15 85.5 68 55.9
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 1.9e-13 79.7 63 57.1
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 3.2e-13 79.0 68 52.9
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 5.5e-13 78.2 86 48.8
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 9.4e-13 77.4 63 54.0
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 3.0e-11 72.4 68 48.5
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 1.7e-09 66.6 75 42.7
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 1.7e-09 66.6 49 57.1
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 8.2e-09 64.3 62 51.6


User provided reference genes

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