Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G1644 Cannabis sativa HOM05D004535 ORTHO05D005341 0.0e+00 3560.0 1813 100.0
Prupe.6G032900 Prunus persica HOM05D004535 ORTHO05D005341 0.0e+00 2999.9 1819 82.6
RcHm_v2.0_Chr5g0075021 Rosa chinensis HOM05D004535 ORTHO05D005341 0.0e+00 2978.0 1822 81.9
MD11G1042000 Malus domestica HOM05D004535 ORTHO05D005341 0.0e+00 2972.2 1819 82.0
FAN11G1653 Fragaria x ananassa HOM05D004535 ORTHO05D005341 0.0e+00 2956.8 1822 81.4
FAN16G2454 Fragaria x ananassa HOM05D004535 ORTHO05D005341 0.0e+00 2956.4 1822 81.3
Dinv19653 Davidia involucrata HOM05D004535 ORTHO05D005341 0.0e+00 2946.8 1823 81.4
FAN21G2952 Fragaria x ananassa HOM05D004535 ORTHO05D005341 0.0e+00 2946.4 1822 81.3
CiPaw.11G209600 Carya illinoinensis HOM05D004535 ORTHO05D005341 0.0e+00 2946.0 1821 81.3
GSVIVG01014769001 Vitis vinifera HOM05D004535 ORTHO05D005341 0.0e+00 2946.0 1819 81.5
FAN25G2892 Fragaria x ananassa HOM05D004535 ORTHO05D005341 0.0e+00 2945.6 1822 81.3
MD03G1040600 Malus domestica HOM05D004535 ORTHO05D005341 0.0e+00 2944.8 1819 81.1
Atru.chr2.3782 Acer truncatum HOM05D004535 ORTHO05D005341 0.0e+00 2927.1 1819 80.9
Manes.01G005500 Manihot esculenta HOM05D004535 ORTHO05D005341 0.0e+00 2886.3 1821 79.8
TWI38G2299 Tripterygium wilfordii HOM05D004535 ORTHO05D005341 0.0e+00 2869.7 1821 79.0
Ciclev10007234m.g Citrus clementina HOM05D004535 ORTHO05D005341 0.0e+00 2866.3 1825 78.9
CSS0018371 Camellia sinensis var. sinensis HOM05D004535 ORTHO05D005341 0.0e+00 2862.4 1820 78.8
QL08p000781 Quercus lobata HOM05D004535 ORTHO05D005341 0.0e+00 2862.4 1774 81.2
Hma1.2p1_0193F.1_g084240 Hydrangea macrophylla HOM05D004535 ORTHO05D005341 0.0e+00 2855.1 1819 78.5
Potri.001G470600 Populus trichocarpa HOM05D004535 ORTHO05D005341 0.0e+00 2850.5 1821 78.5
FvH4_3g41830 Fragaria vesca HOM05D004535 ORTHO05D005341 0.0e+00 2847.8 1759 81.1
Thecc.07G003100 Theobroma cacao HOM05D004535 ORTHO05D005341 0.0e+00 2842.8 1765 80.3
Gorai.009G454100 Gossypium raimondii HOM05D004535 ORTHO05D005341 0.0e+00 2836.2 1807 78.9
Rhsim04G0008600 Rhododendron simsii HOM05D004535 ORTHO05D005341 0.0e+00 2827.7 1836 76.9
Glyma.18G071500 Glycine max HOM05D004535 ORTHO05D005341 0.0e+00 2824.7 1822 77.4
Haze_09903 Corylus avellana HOM05D004535 ORTHO05D005341 0.0e+00 2820.0 1858 77.9
Glyma.08G336400 Glycine max HOM05D004535 ORTHO05D005341 0.0e+00 2817.3 1823 77.2
Psat5g164120 Pisum sativum HOM05D004535 ORTHO05D005341 0.0e+00 2811.9 1823 77.3
Lj6g0015552 Lotus japonicus HOM05D004535 ORTHO05D005341 0.0e+00 2801.5 1822 76.9
Lj1C898T24 Lonicera japonica HOM05D004535 ORTHO05D005341 0.0e+00 2798.8 1838 77.0
TAR627G0331 Trochodendron aralioides HOM05D004535 ORTHO05D005341 0.0e+00 2795.8 1819 76.9
Medtr3g461520 Medicago truncatula HOM05D004535 ORTHO05D005341 0.0e+00 2794.6 1822 76.8
vmacro09603 Vaccinium macrocarpon HOM05D004535 ORTHO05D005341 0.0e+00 2787.7 1928 73.5
Lalb_Chr18g0050431 Lupinus albus HOM05D004535 ORTHO05D005341 0.0e+00 2778.8 1822 76.4
Gohir.D05G387450 Gossypium hirsutum HOM05D004535 ORTHO05D005341 0.0e+00 2774.6 1807 77.8
Lalb_Chr20g0115261 Lupinus albus HOM05D004535 ORTHO05D005341 0.0e+00 2772.7 1822 76.1
Phvul.006G061700 Phaseolus vulgaris HOM05D004535 ORTHO05D005341 0.0e+00 2771.1 1824 76.1
Sabra11G0138700 Salix brachista HOM05D004535 ORTHO05D005341 0.0e+00 2765.7 1976 72.0
PGR083G0052 Punica granatum HOM05D004535 ORTHO05D005341 0.0e+00 2757.2 1821 75.5
Sed0018073 Sechium edule HOM05D004535 ORTHO05D005341 0.0e+00 2756.5 1819 76.4
TPR.G14720 Trifolium pratense HOM05D004535 ORTHO05D005341 0.0e+00 2748.0 1821 75.7
Duzib213G0320 Durio zibethinus HOM05D004535 ORTHO05D005341 0.0e+00 2743.4 1820 76.8
ClCG10G004180 Citrullus lanatus HOM05D004535 ORTHO05D005341 0.0e+00 2740.7 1830 75.7
Eucgr.F02001 Eucalyptus grandis HOM05D004535 ORTHO05D005341 0.0e+00 2729.9 1818 74.9
arahy.Tifrunner.gnm1.ann1.DDNH16 Arachis hypogaea HOM05D004535 ORTHO05D005341 0.0e+00 2712.2 1904 72.7
MELO3C014086.2 Cucumis melo HOM05D004535 ORTHO05D005341 0.0e+00 2709.1 1818 75.0
Sopen07g034220 Solanum pennellii HOM05D004535 ORTHO05D005341 0.0e+00 2695.2 1820 74.7
Solyc07g066030.4 Solanum lycopersicum HOM05D004535 ORTHO05D005341 0.0e+00 2694.5 1820 74.7
VMungo0540G2510 Vigna mungo HOM05D004535 ORTHO05D005341 0.0e+00 2687.5 1766 76.4
Cc05_g15580 Coffea canephora HOM05D004535 ORTHO05D005341 0.0e+00 2674.8 1825 74.2
CsaV3_3G003990 Cucumis sativus L. HOM05D004535 ORTHO05D005341 0.0e+00 2674.4 1818 74.1
AL3G25150 Arabidopsis lyrata HOM05D004535 ORTHO05D005341 0.0e+00 2667.5 1819 73.6
Thhalv10019881m.g Eutrema salsugineum HOM05D004535 ORTHO05D005341 0.0e+00 2664.4 1819 73.7
BcaB04g18753 Brassica carinata HOM05D004535 ORTHO05D005341 0.0e+00 2663.3 1819 73.2
ECA240G2049 Erigeron canadensis HOM05D004535 ORTHO05D005341 0.0e+00 2662.9 1817 73.7
THA.LOC104822705 Tarenaya hassleriana HOM05D004535 ORTHO05D005341 0.0e+00 2658.2 1820 73.1
HanXRQChr03g0079281 Helianthus annuus HOM05D004535 ORTHO05D005341 0.0e+00 2657.5 1821 73.5
Aa31LG8G550 Aethionema arabicum HOM05D004535 ORTHO05D005341 0.0e+00 2654.0 1819 72.8
AT3G13330 Arabidopsis thaliana HOM05D004535 ORTHO05D005341 0.0e+00 2651.7 1819 73.2
Carub.0003s1271 Capsella rubella HOM05D004535 ORTHO05D005341 0.0e+00 2650.5 1819 73.2
Aqoxy4G02281 Aquilegia oxysepala HOM05D004535 ORTHO05D005341 0.0e+00 2650.2 1819 72.6
BraA03t12967Z Brassica rapa HOM05D004535 ORTHO05D005341 0.0e+00 2640.9 1819 72.7
BcaC01g03999 Brassica carinata HOM05D004535 ORTHO05D005341 0.0e+00 2639.4 1818 72.8
BolC3t16899H Brassica oleracea HOM05D004535 ORTHO05D005341 0.0e+00 2638.2 1819 72.7
A03p38140 Brassica napus HOM05D004535 ORTHO05D005341 0.0e+00 2637.4 1819 72.6
Migut.M01591 Erythranthe guttata HOM05D004535 ORTHO05D005341 0.0e+00 2637.1 1820 73.1
C03p46300 Brassica napus HOM05D004535 ORTHO05D005341 0.0e+00 2635.9 1818 72.8
Gohir.A04G001901 Gossypium hirsutum HOM05D004535 ORTHO05D005341 0.0e+00 2630.1 1678 79.3
CARHR087940 Cardamine hirsuta HOM05D004535 ORTHO05D005341 0.0e+00 2629.4 1820 72.7
Sp3g11530 Schrenkiella parvula HOM05D004535 ORTHO05D005341 0.0e+00 2627.4 1819 72.5
MSTRG.15824 Avicennia marina HOM05D004535 ORTHO05D005341 0.0e+00 2614.3 1819 72.2
PSO210G5731 Papaver somniferum HOM05D004535 ORTHO05D005341 0.0e+00 2603.9 1819 71.5
EL10Ac4g07499 Beta vulgaris HOM05D004535 ORTHO05D005341 0.0e+00 2603.5 1814 71.3
Sc20g0000040 Simmondsia chinensis HOM05D004535 ORTHO05D005341 0.0e+00 2600.9 1820 71.9
Nitab4.5_0001303g0050 Nicotiana tabacum HOM05D004535 ORTHO05D005341 0.0e+00 2597.0 1806 72.8
AUR62035634 Chenopodium quinoa HOM05D004535 ORTHO05D005341 0.0e+00 2596.6 1825 71.6
AUR62017172 Chenopodium quinoa HOM05D004535 ORTHO05D005341 0.0e+00 2589.7 1835 70.7
SalBow8G3417 Salvia bowleyana HOM05D004535 ORTHO05D005341 0.0e+00 2577.4 1849 71.0
Oeu013013.2 Olea europaea HOM05D004535 ORTHO05D005341 0.0e+00 2575.0 1896 70.1
QL08p000755 Quercus lobata HOM05D004535 ORTHO05D005341 0.0e+00 2573.5 1947 68.6
Lsat_1_v5_gn_9_89621 Lactuca sativa HOM05D004535 ORTHO05D005341 0.0e+00 2565.4 1815 71.7
Medtr3g461500 Medicago truncatula HOM05D004535 ORTHO05D005341 0.0e+00 2563.5 1858 70.9
HanXRQChr13g0409231 Helianthus annuus HOM05D004535 ORTHO05D005341 0.0e+00 2548.5 1818 71.0
Peaxi162Scf00232g00530 Petunia axillaris HOM05D004535 ORTHO05D005341 0.0e+00 2527.7 1837 70.5
MBI15_g37116_MAGBIO Magnolia biondii HOM05D004535 ORTHO05D005341 0.0e+00 2512.3 1793 71.2
Haze_09904 Corylus avellana HOM05D004535 ORTHO05D005341 0.0e+00 2488.8 1906 67.9
SalBow8G2487 Salvia bowleyana HOM05D004535 ORTHO05D005341 0.0e+00 2487.6 1829 69.1
Hund22978 Selenicereus undatus HOM05D004535 ORTHO05D005341 0.0e+00 2481.4 1822 69.6
DCAR_013765 Daucus carota HOM05D004535 ORTHO05D005341 0.0e+00 2461.4 1819 69.7
Actinidia03667 Actinidia chinensis HOM05D004535 ORTHO05D005341 0.0e+00 2454.5 1566 79.9
Nn1g08312 Nelumbo nucifera HOM05D004535 ORTHO05D005341 0.0e+00 2449.1 1627 76.3
Ah.06g180940 Amaranthus hybridus HOM05D004535 ORTHO05D005341 0.0e+00 2447.2 1841 67.1
HPP92_018915 Vanilla planifolia HOM05D004535 ORTHO05D005341 0.0e+00 2378.2 1828 66.0
ATR0751G071 Amborella trichopoda HOM05D004535 ORTHO05D005341 0.0e+00 2363.2 1827 65.7
Nitab4.5_0000152g0130 Nicotiana tabacum HOM05D004535 ORTHO05D005341 0.0e+00 2346.2 1654 72.6
Ca_14867_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 0.0e+00 2310.8 1518 76.3
CiPaw.12G142100 Carya illinoinensis HOM05D004535 ORTHO05D005341 0.0e+00 2305.8 1681 69.7
Cpa.g.sc12.80 Carica papaya HOM05D004535 ORTHO05D005341 0.0e+00 2259.6 1745 68.8
arahy.Tifrunner.gnm1.ann1.HJC4WF Arachis hypogaea HOM05D004535 ORTHO05D005341 0.0e+00 2236.8 1444 77.1
Zm00001eb281130 Zea mays HOM05D004535 ORTHO05D005341 0.0e+00 2169.8 1819 61.2
MD00G1206400 Malus domestica HOM05D004535 ORTHO05D005341 0.0e+00 1989.2 1253 80.2
Potri.011G167700 Populus trichocarpa HOM05D004535 ORTHO05D005341 0.0e+00 1835.5 1148 78.9
CDE05G3236 Ceratophyllum demersum HOM05D004535 ORTHO05D005341 0.0e+00 1825.1 1448 64.9
unitig_699.g19598 Utricularia gibba HOM05D004535 ORTHO05D005341 0.0e+00 1763.4 1813 53.3
PGSC0003DMG401022150 Solanum tuberosum HOM05D004535 ORTHO05D005341 0.0e+00 1454.5 945 75.2
Pp3c20_11540 Physcomitrium patens HOM05D004535 ORTHO05D005341 0.0e+00 1418.7 1855 42.3
Mapoly0071s0029 Marchantia polymorpha HOM05D004535 ORTHO05D005341 0.0e+00 1411.4 1932 41.7
AagrBONN_evm.TU.Sc2ySwM_228.5886 Anthoceros agrestis HOM05D004535 ORTHO05D005341 0.0e+00 1405.6 1867 43.4
Mapoly0069s0005 Marchantia polymorpha HOM05D004535 ORTHO05D005341 0.0e+00 1323.9 1882 40.5
Pp3c15_5520 Physcomitrium patens HOM05D004535 ORTHO05D005341 0.0e+00 1248.4 1837 39.5
CAN.G623.63 Capsicum annuum HOM05D004535 ORTHO05D005341 0.0e+00 1215.7 867 73.1
SMO184G0002 Selaginella moellendorffii HOM05D004535 ORTHO05D005341 0.0e+00 1204.5 1864 38.4
SMO340G0109 Selaginella moellendorffii HOM05D004535 ORTHO05D005341 0.0e+00 1166.4 1838 37.2
Ca_14861_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 0.0e+00 1094.3 722 74.8
CAN.G623.64 Capsicum annuum HOM05D004535 ORTHO05D005341 4.7e-309 1065.4 954 60.0
SMO239G0001 Selaginella moellendorffii HOM05D004535 ORTHO05D005341 8.2e-306 1054.7 1840 35.4
CBR_g24134 Chara braunii HOM05D004535 ORTHO05D005341 5.0e-279 965.7 1973 33.5
COL.COLO4_07778 Corchorus olitorius HOM05D004535 ORTHO05D005341 1.8e-276 957.2 1206 48.7
Os06g0301300 Oryza sativa ssp. japonica HOM05D004535 ORTHO05D005341 3.7e-258 896.3 693 63.6
Potri.011G167650 Populus trichocarpa HOM05D004535 ORTHO05D005341 7.9e-216 755.7 506 76.5
Actinidia00829 Actinidia chinensis HOM05D004535 ORTHO05D005341 5.3e-180 636.7 623 60.7
QL10p044954 Quercus lobata HOM05D004535 ORTHO05D005341 3.9e-146 524.2 636 50.2
SEGI_13123 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 3.1e-143 514.6 458 55.0
Ca_14860_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 3.5e-131 474.6 340 73.2
MCO11G531 Micromonas commoda HOM05D004535 ORTHO05D005341 1.6e-123 449.1 1916 24.9
VMungo0540G1109 Vigna mungo HOM05D004535 ORTHO05D005341 2.5e-121 441.8 321 68.5
SEGI_38328 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 4.0e-111 407.9 469 48.0
MD00G1206500 Malus domestica HOM05D004535 ORTHO05D005341 4.6e-107 394.4 247 83.8
Actinidia00827 Actinidia chinensis HOM05D004535 ORTHO05D005341 2.4e-103 382.1 304 64.8
MD00G1206600 Malus domestica HOM05D004535 ORTHO05D005341 2.4e-103 382.1 221 78.3
VMungo1127G2045 Vigna mungo HOM05D004535 ORTHO05D005341 1.1e-100 373.2 305 65.2
SEGI_32129 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 2.9e-85 322.0 359 54.0
arahy.Tifrunner.gnm1.ann1.P6R29M Arachis hypogaea HOM05D004535 ORTHO05D005341 3.3e-81 308.5 345 52.2
PRCOL_00006556 Prasinoderma coloniale HOM05D004535 ORTHO05D005341 1.4e-79 303.1 1932 22.0
Actinidia03668 Actinidia chinensis HOM05D004535 ORTHO05D005341 1.4e-76 293.1 226 63.3
Nn1g08306 Nelumbo nucifera HOM05D004535 ORTHO05D005341 6.3e-72 277.7 168 75.6
SEGI_15666 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 7.8e-38 164.5 138 63.8
Cpa.g.sc12.82 Carica papaya HOM05D004535 ORTHO05D005341 1.5e-36 160.2 90 87.8
Actinidia00828 Actinidia chinensis HOM05D004535 ORTHO05D005341 9.5e-36 157.5 210 45.2
Cfa027001 Carpinus fangiana HOM05D004535 ORTHO05D005341 7.5e-33 147.9 1751 20.8
Cre14.g628702 Chlamydomonas reinhardtii HOM05D004535 ORTHO05D005341 1.6e-30 140.2 651 23.8
arahy.Tifrunner.gnm1.ann1.A7P7U5 Arachis hypogaea HOM05D004535 ORTHO05D005341 1.2e-25 124.0 93 74.2
PSO541G1144 Papaver somniferum HOM05D004535 ORTHO05D005341 2.9e-24 119.4 74 74.3
Lsat_1_v5_gn_0_5420 Lactuca sativa HOM05D004535 ORTHO05D005341 4.1e-23 115.5 76 69.7
arahy.Tifrunner.gnm1.ann1.6S2B7N Arachis hypogaea HOM05D012221 ORTHO05D005341 4.6e-22 112.1 116 59.5
Ca_31034_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 3.0e-21 109.4 75 74.7
Psat5g106440 Pisum sativum HOM05D004535 ORTHO05D005341 5.1e-21 108.6 65 81.5
arahy.Tifrunner.gnm1.ann1.QBA8JR Arachis hypogaea HOM05D004535 ORTHO05D005341 6.6e-21 108.2 163 46.6
arahy.Tifrunner.gnm1.ann1.EHT35G Arachis hypogaea HOM05D004535 ORTHO05D005341 1.2e-19 104.0 117 54.7
VMungo1215G1327 Vigna mungo HOM05D004535 ORTHO05D005341 1.7e-16 93.6 63 77.8
SEGI_18126 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 1.3e-13 84.0 73 49.3
arahy.Tifrunner.gnm1.ann1.HQ6FCP Arachis hypogaea HOM05D004535 ORTHO05D005341 1.1e-12 80.9 170 40.0
VMungo0110G0001 Vigna mungo HOM05D004535 ORTHO05D005341 1.2e-11 77.4 68 50.0
Psat4g112520 Pisum sativum HOM05D004535 ORTHO05D005341 1.4e-10 73.9 45 75.6
PGSC0003DMG402022150 Solanum tuberosum HOM05D004535 ORTHO05D005341 2.4e-10 73.2 98 46.9
VMungo0720G2789 Vigna mungo HOM05D003238 ORTHO05D003571 1.3e-08 67.4 58 67.2
CSS0045016 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D000018 2.9e-08 66.2 139 36.0


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