Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G1392 Cannabis sativa HOM05D006536 ORTHO05D005877 1.9e-59 232.6 152 100.0
CANSAT54G1080 Cannabis sativa HOM05D006536 ORTHO05D005877 2.0e-24 116.3 108 56.5
CANSAT54G2394 Cannabis sativa HOM05D006536 ORTHO05D005877 3.0e-20 102.4 103 52.4
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 5.9e-16 88.2 106 45.3
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 3.3e-14 82.4 104 40.4
Cfa020407 Carpinus fangiana HOM05D006536 ORTHO05D005877 9.5e-14 80.9 101 43.6
Peaxi162Scf00057g00136 Petunia axillaris HOM05D006536 ORTHO05D005877 1.2e-13 80.5 108 43.5
CiPaw.12G126700 Carya illinoinensis HOM05D006536 ORTHO05D005877 2.8e-13 79.3 100 41.0
Migut.H00699 Erythranthe guttata HOM05D006536 ORTHO05D005877 8.0e-13 77.8 97 37.1
Eucgr.F03431 Eucalyptus grandis HOM05D006536 ORTHO05D005877 1.4e-12 77.0 107 36.4
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 5.2e-12 75.1 104 38.5
Peaxi162Scf00450g00873 Petunia axillaris HOM05D006536 ORTHO05D005877 5.2e-12 75.1 108 37.0
Peaxi162Scf00450g00816 Petunia axillaris HOM05D006536 ORTHO05D005877 1.5e-11 73.6 108 36.1
Nitab4.5_0000472g0270 Nicotiana tabacum HOM05D006536 ORTHO05D005877 4.4e-11 72.0 104 40.4
Peaxi162Scf00714g00425 Petunia axillaris HOM05D006536 ORTHO05D005877 4.4e-11 72.0 107 35.5
Nitab4.5_0001479g0060 Nicotiana tabacum HOM05D006536 ORTHO05D005877 5.7e-11 71.6 104 36.5
Nitab4.5_0004487g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 5.7e-11 71.6 104 35.6
Dinv26537 Davidia involucrata HOM05D006536 ORTHO05D005877 9.8e-11 70.9 104 32.7
Nitab4.5_0006023g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.7e-10 70.1 103 38.8
Nitab4.5_0000397g0170 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.2e-10 69.7 104 35.6
PGR083G0291 Punica granatum HOM05D006536 ORTHO05D005877 2.2e-10 69.7 103 34.0
CDE11G0063 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 3.7e-10 68.9 107 37.4
COL.COLO4_09579 Corchorus olitorius HOM05D006536 ORTHO05D005877 4.9e-10 68.6 103 37.9
Nitab4.5_0008018g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 6.4e-10 68.2 104 35.6
Peaxi162Scf00450g00854 Petunia axillaris HOM05D006536 ORTHO05D005877 6.4e-10 68.2 109 35.8
SHI31832 Sapria himalayana HOM05D006536 ORTHO05D005877 6.4e-10 68.2 104 33.7
CDE11G0553 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 8.3e-10 67.8 109 39.4
Nn1g07021 Nelumbo nucifera HOM05D023228 ORTHO05D005877 8.3e-10 67.8 103 35.0
PGSC0003DMG400001033 Solanum tuberosum HOM05D006536 ORTHO05D005877 8.3e-10 67.8 105 34.3
SGA_v2.0_scaffold20G09060 Striga asiatica HOM05D006536 ORTHO05D005877 8.3e-10 67.8 100 37.0
THA.LOC104799881 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.1e-09 67.4 118 33.1
THA.LOC104799882 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.1e-09 67.4 114 30.7
CDE05G1907 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 1.8e-09 66.6 108 38.0
Lsat_1_v5_gn_3_115460 Lactuca sativa HOM05D006536 ORTHO05D005877 1.8e-09 66.6 107 38.3
ClCG10G005680 Citrullus lanatus HOM05D006536 ORTHO05D005877 3.2e-09 65.9 102 37.3
DCAR_022529 Daucus carota HOM05D006536 ORTHO05D005877 3.2e-09 65.9 113 32.7
PSO541G4685 Papaver somniferum HOM05D006536 ORTHO05D005877 3.2e-09 65.9 105 34.3
Solyc07g064210.2 Solanum lycopersicum HOM05D006536 ORTHO05D005877 4.1e-09 65.5 105 33.3
Sopen07g032350 Solanum pennellii HOM05D006536 ORTHO05D005877 4.1e-09 65.5 105 33.3
THA.LOC104822213 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 4.1e-09 65.5 115 32.2
Migut.J01038 Erythranthe guttata HOM05D006536 ORTHO05D005877 5.4e-09 65.1 108 29.6
QL08p013066 Quercus lobata HOM05D006536 ORTHO05D005877 5.4e-09 65.1 100 38.0
Sed0024994 Sechium edule HOM05D006536 ORTHO05D005877 5.4e-09 65.1 103 35.0
Hma1.2p1_0745F.1_g212040 Hydrangea macrophylla HOM05D006536 ORTHO05D005877 7.0e-09 64.7 97 35.1
SHI26644 Sapria himalayana HOM05D006536 ORTHO05D005877 7.0e-09 64.7 104 29.8
PSO675G9181 Papaver somniferum HOM05D006536 ORTHO05D005877 9.2e-09 64.3 105 33.3
Nn1g07017 Nelumbo nucifera HOM05D023228 ORTHO05D005877 1.2e-08 63.9 104 33.7
PSO541G5532 Papaver somniferum HOM05D006536 ORTHO05D005877 1.2e-08 63.9 104 33.7
Solyc08g080480.3 Solanum lycopersicum HOM05D006536 ORTHO05D005877 1.2e-08 63.9 102 35.3
SGA_v2.0_scaffold13G06717 Striga asiatica HOM05D006536 ORTHO05D005877 1.2e-08 63.9 110 29.1
Thhalv10026791m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 1.6e-08 63.5 131 33.6
SHI26637 Sapria himalayana HOM05D006536 ORTHO05D005877 1.6e-08 63.5 94 31.9
Sopen08g028800 Solanum pennellii HOM05D006536 ORTHO05D005877 1.6e-08 63.5 102 36.3
EL10Ac4g07942 Beta vulgaris HOM05D009374 ORTHO05D005877 2.0e-08 63.2 104 35.6
Nn1g07020 Nelumbo nucifera HOM05D023228 ORTHO05D005877 2.0e-08 63.2 104 33.7
Nitab4.5_0001479g0070 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.0e-08 63.2 105 38.1
PSO478G5239 Papaver somniferum HOM05D006536 ORTHO05D005877 2.7e-08 62.8 104 33.7
Sopen08g028810 Solanum pennellii HOM05D006536 ORTHO05D005877 2.7e-08 62.8 102 33.3
Cpa.g.sc10.244 Carica papaya HOM05D007475 ORTHO05D009529 4.6e-08 62.0 113 35.4
AUR62015663 Chenopodium quinoa HOM05D009374 ORTHO05D005877 4.6e-08 62.0 102 32.4
Peaxi162Scf00714g00432 Petunia axillaris HOM05D006536 ORTHO05D005877 4.6e-08 62.0 98 31.6
SHI26633 Sapria himalayana HOM05D006536 ORTHO05D005877 4.6e-08 62.0 94 31.9
Sopen07g032370 Solanum pennellii HOM05D006536 ORTHO05D005877 4.6e-08 62.0 99 33.3
Nitab4.5_0001479g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 5.9e-08 61.6 104 34.6
PGR083G2006 Punica granatum HOM05D006536 ORTHO05D005877 5.9e-08 61.6 105 32.4
SHI26638 Sapria himalayana HOM05D006536 ORTHO05D005877 5.9e-08 61.6 94 30.9
Atru.chr2.3226 Acer truncatum HOM05D001264 ORTHO05D001167 7.8e-08 61.2 102 31.4
ClCG10G005660 Citrullus lanatus HOM05D006536 ORTHO05D005877 1.0e-07 60.8 99 32.3
THA.LOC104817654 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.0e-07 60.8 114 31.6
PSO541G3913 Papaver somniferum HOM05D006536 ORTHO05D005877 1.3e-07 60.5 105 32.4
CAN.G981.16 Capsicum annuum HOM05D006536 ORTHO05D005877 1.7e-07 60.1 104 30.8
Peaxi162Scf00714g00424 Petunia axillaris HOM05D006536 ORTHO05D005877 1.7e-07 60.1 104 31.7
SGA_v2.0_scaffold13G06718 Striga asiatica HOM05D006536 ORTHO05D005877 1.7e-07 60.1 108 27.8
PSO782G1199 Papaver somniferum HOM05D006536 ORTHO05D005877 2.3e-07 59.7 61 42.6
AUR62020540 Chenopodium quinoa HOM05D009374 ORTHO05D005877 3.0e-07 59.3 102 33.3
Migut.J01035 Erythranthe guttata HOM05D006536 ORTHO05D005877 3.0e-07 59.3 106 29.2
Migut.J01036 Erythranthe guttata HOM05D006536 ORTHO05D005877 3.0e-07 59.3 110 29.1
THA.LOC104813415 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 3.0e-07 59.3 118 27.1
ClCG09G018590 Citrullus lanatus HOM05D006536 ORTHO05D005877 3.9e-07 58.9 101 31.7
MELO3C025418.2 Cucumis melo HOM05D006536 ORTHO05D005877 3.9e-07 58.9 101 32.7
Lsat_1_v5_gn_3_115400 Lactuca sativa HOM05D006536 ORTHO05D005877 3.9e-07 58.9 107 34.6
Lsat_1_v5_gn_5_5901 Lactuca sativa HOM05D009374 ORTHO05D005877 3.9e-07 58.9 116 28.4
Cpa.g.sc97.59 Carica papaya HOM05D007475 ORTHO05D009529 5.0e-07 58.5 108 36.1
MELO3C032238.2 Cucumis melo HOM05D006536 ORTHO05D005877 5.0e-07 58.5 72 36.1
PSO541G2788 Papaver somniferum HOM05D006536 ORTHO05D005877 5.0e-07 58.5 98 32.7
Cpa.g.sc10.243 Carica papaya HOM05D007475 ORTHO05D009529 6.6e-07 58.2 117 32.5
Cpa.g.sc10.249 Carica papaya HOM05D007475 ORTHO05D009529 6.6e-07 58.2 114 31.6
Cpa.g.sc10.251 Carica papaya HOM05D007475 ORTHO05D009529 6.6e-07 58.2 120 33.3
PGSC0003DMG400001052 Solanum tuberosum HOM05D006536 ORTHO05D005877 6.6e-07 58.2 69 37.7
TWI39G0888 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 6.6e-07 58.2 102 31.4
Cpa.g.sc10.239 Carica papaya HOM05D007475 ORTHO05D009529 8.6e-07 57.8 120 33.3
THA.LOC104809798 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 8.6e-07 57.8 75 33.3
Eucgr.F00977 Eucalyptus grandis HOM05D006536 ORTHO05D005877 1.1e-06 57.4 110 30.9
HanXRQChr11g0337791 Helianthus annuus HOM05D009374 ORTHO05D012864 1.1e-06 57.4 111 31.5
Ah.06g183000 Amaranthus hybridus HOM05D001264 ORTHO05D001167 1.5e-06 57.0 102 34.3
CsaV3_3G005360 Cucumis sativus L. HOM05D006536 ORTHO05D005877 1.5e-06 57.0 72 33.3
Migut.J01041 Erythranthe guttata HOM05D006536 ORTHO05D005877 1.5e-06 57.0 112 27.7
Manes.15G075900 Manihot esculenta HOM05D007475 ORTHO05D005877 1.5e-06 57.0 101 29.7
THA.LOC104817656 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.5e-06 57.0 114 28.1
THA.LOC104822214 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.5e-06 57.0 114 28.1
THA.LOC104822215 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.5e-06 57.0 114 28.1
Carub.0007s1370 Capsella rubella HOM05D007475 ORTHO05D009529 1.9e-06 56.6 112 33.9
Sopen07g032360 Solanum pennellii HOM05D006536 ORTHO05D005877 1.9e-06 56.6 105 31.4
Carub.0008s0615 Capsella rubella HOM05D007475 ORTHO05D009529 2.5e-06 56.2 114 36.8
ECA236G0204 Erigeron canadensis HOM05D009374 ORTHO05D012864 2.5e-06 56.2 109 30.3
ECA236G4404 Erigeron canadensis HOM05D009374 ORTHO05D012864 2.5e-06 56.2 112 29.5
HanXRQChr11g0332911 Helianthus annuus HOM05D009374 ORTHO05D012864 2.5e-06 56.2 119 28.6
Solyc08g080490.3 Solanum lycopersicum HOM05D006536 ORTHO05D005877 2.5e-06 56.2 63 38.1
unitig_8.g4307 Utricularia gibba HOM05D006536 ORTHO05D005877 2.5e-06 56.2 110 31.8
Sp6g16690 Schrenkiella parvula HOM05D007475 ORTHO05D009529 3.3e-06 55.8 124 30.6
unitig_744.g24698 Utricularia gibba HOM05D009374 ORTHO05D005877 3.3e-06 55.8 107 27.1
Thhalv10015934m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 4.3e-06 55.5 121 30.6
HanXRQChr15g0493431 Helianthus annuus HOM05D009374 ORTHO05D012864 4.3e-06 55.5 103 29.1
Solyc07g064220.1 Solanum lycopersicum HOM05D006536 ORTHO05D005877 4.3e-06 55.5 105 31.4
Thecc.07G051300 Theobroma cacao HOM05D006536 ORTHO05D005877 5.6e-06 55.1 109 27.5
AL7G25660 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 7.3e-06 54.7 121 32.2
COL.COLO4_15402 Corchorus olitorius HOM05D006536 ORTHO05D005877 7.3e-06 54.7 104 34.6


User provided reference genes

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