Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 0.0e+00 1115.9 574 100.0
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 3.3e-208 728.8 552 71.9
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 1.6e-207 726.5 599 66.6
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 2.8e-207 725.7 523 75.1
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 9.8e-205 717.2 520 75.0
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 5.4e-203 711.4 549 71.6
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 1.2e-202 710.3 552 70.5
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 4.7e-199 698.4 551 69.3
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 1.1e-198 697.2 512 73.6
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 1.7e-196 689.9 520 72.7
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 3.2e-195 685.6 541 68.8
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 1.2e-194 683.7 512 71.5
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 5.1e-193 678.3 556 67.6
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.9e-192 676.4 560 66.2
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 4.3e-192 675.2 554 67.3
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 3.4e-189 665.6 561 66.7
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 9.9e-189 664.1 577 65.2
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 3.8e-188 662.1 565 65.3
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 1.1e-187 660.6 529 69.0
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 1.4e-187 660.2 515 68.9
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 1.2e-186 657.1 517 69.4
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.2e-186 657.1 563 65.9
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 2.1e-186 656.4 512 70.7
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 2.1e-186 656.4 529 68.4
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 3.5e-186 655.6 529 68.6
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 4.6e-186 655.2 522 69.5
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 8.7e-185 651.0 511 71.2
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 4.3e-184 648.7 524 67.9
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 4.3e-184 648.7 510 70.6
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 2.8e-183 646.0 509 67.2
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 1.2e-181 640.6 511 67.9
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 1.5e-181 640.2 525 66.5
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 9.3e-179 630.9 522 68.8
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 1.6e-178 630.2 514 69.3
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 7.9e-178 627.9 518 67.6
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 1.5e-176 623.6 521 65.8
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 2.5e-176 622.9 525 66.9
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 2.1e-175 619.8 512 66.0
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 5.3e-174 615.1 511 66.7
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 1.5e-173 613.6 518 65.6
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 5.8e-173 611.7 522 65.3
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 6.4e-172 608.2 525 66.5
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 9.3e-171 604.4 524 64.1
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 3.5e-170 602.4 513 64.1
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 9.6e-168 594.3 521 63.5
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 2.1e-167 593.2 559 59.7
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 2.1e-167 593.2 512 64.3
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 3.7e-167 592.4 599 58.4
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 1.4e-166 590.5 520 64.4
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 6.9e-166 588.2 515 62.7
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 6.9e-166 588.2 523 62.1
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 9.0e-166 587.8 524 62.8
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 1.5e-165 587.0 523 62.5
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 1.5e-165 587.0 520 62.5
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 3.4e-165 585.9 534 62.0
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 6.5e-164 581.6 527 63.0
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 9.3e-163 577.8 571 59.0
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 8.7e-161 571.2 513 62.0
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 1.9e-160 570.1 511 62.6
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 9.0e-158 561.2 518 61.8
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 1.2e-157 560.8 512 63.5
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 4.3e-152 542.3 514 61.7
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 1.6e-151 540.4 595 54.8
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 8.5e-148 528.1 554 55.8
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 3.6e-146 522.7 510 58.4
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 3.6e-146 522.7 542 57.9
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 3.6e-146 522.7 542 57.9
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 3.6e-146 522.7 516 57.6
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 1.1e-144 517.7 506 58.5
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 5.7e-144 515.4 526 56.5
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 9.7e-144 514.6 490 59.2
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 2.2e-140 503.4 509 56.8
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 1.7e-135 487.3 512 57.6
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 8.2e-135 485.0 525 56.2
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 1.4e-134 484.2 457 58.9
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 2.4e-134 483.4 514 55.6
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 5.9e-133 478.8 514 55.3
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 1.3e-132 477.6 477 56.6
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 1.7e-132 477.2 510 54.1
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 5.5e-131 472.2 428 61.7
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 2.1e-130 470.3 531 52.4
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 3.1e-126 456.4 425 63.8
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 3.6e-122 443.0 511 52.6
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 3.7e-119 433.0 513 51.9
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 4.8e-119 432.6 515 53.4
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 3.8e-116 422.9 503 50.1
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 7.2e-115 418.7 520 52.7
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 2.0e-112 410.6 359 64.3
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 2.2e-111 407.1 517 47.2
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 3.1e-110 403.3 529 50.3
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 2.3e-108 397.1 533 48.6
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 2.8e-106 390.2 515 48.2
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 2.8e-98 363.6 532 48.7
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 4.7e-98 362.8 516 47.3
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 7.0e-94 349.0 551 42.1
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 6.6e-92 342.4 527 44.4
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.2e-90 338.2 346 58.1
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 6.2e-90 335.9 309 60.5
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 4.0e-89 333.2 547 42.0
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 8.3e-87 325.5 577 39.2
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 1.1e-83 315.1 520 41.7
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 2.0e-80 304.3 298 57.7
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 6.4e-79 299.3 517 41.4
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 3.6e-74 283.5 233 63.1
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 1.4e-70 271.6 454 40.5
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 9.6e-67 258.8 241 62.2
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 5.1e-60 236.5 362 44.8
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 1.8e-57 228.0 569 32.7
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 2.1e-45 188.0 624 30.3
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 2.6e-40 171.0 388 35.1
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 1.0e-39 169.1 513 29.4
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 1.3e-34 152.1 200 47.5
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 1.3e-31 142.1 86 77.9
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 1.4e-17 95.5 64 75.0
Peaxi162Scf00370g00114 Petunia axillaris HOM05D006568 ORTHO05D008342 1.1e-14 85.9 117 43.6
Oeu060513.1 Olea europaea HOM05D006568 ORTHO05D008342 5.3e-09 67.0 53 64.2
SMO172G0023 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 1.2e-08 65.9 67 50.7
Medtr8g014610 Medicago truncatula HOM05D006568 ORTHO05D258972 7.2e-06 56.6 68 52.9


User provided reference genes

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