Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G1352 Cannabis sativa HOM05D008268 ORTHO05D010144 1.5e-225 785.8 390 100.0
CiPaw.11G178900 Carya illinoinensis HOM05D008268 ORTHO05D010144 1.3e-19 101.7 385 34.3
Glyma.13G282800 Glycine max HOM05D008268 ORTHO05D010144 1.7e-19 101.3 408 30.6
Prupe.4G192500 Prunus persica HOM05D008268 ORTHO05D010144 3.9e-19 100.1 423 32.2
MD03G1216800 Malus domestica HOM05D008268 ORTHO05D010144 2.5e-18 97.4 320 35.3
QL08p017136 Quercus lobata HOM05D008268 ORTHO05D010144 9.5e-18 95.5 384 31.8
Dinv08361 Davidia involucrata HOM05D008268 ORTHO05D010144 2.8e-17 94.0 393 29.8
MD11G1234600 Malus domestica HOM05D008268 ORTHO05D010144 2.8e-17 94.0 440 30.5
Manes.15G081401 Manihot esculenta HOM05D008268 ORTHO05D010144 2.9e-14 84.0 394 28.9
VMungo1080G0851 Vigna mungo HOM05D008268 ORTHO05D010144 4.6e-12 76.6 374 27.5
Cfa020486 Carpinus fangiana HOM05D008268 ORTHO05D010144 6.0e-12 76.3 390 31.0
Phvul.005G087800 Phaseolus vulgaris HOM05D008268 ORTHO05D010144 1.0e-11 75.5 375 28.3
Haze_09553 Corylus avellana HOM05D008268 ORTHO05D010144 1.3e-11 75.1 363 31.7
Dinv22349 Davidia involucrata HOM05D008268 ORTHO05D010144 1.3e-11 75.1 429 29.4
Lalb_Chr25g0286831 Lupinus albus HOM05D008268 ORTHO05D010144 5.1e-11 73.2 375 29.9
Sabra16G0271800 Salix brachista HOM05D019858 ORTHO05D010144 5.1e-11 73.2 381 28.3
Sabra16G0276800 Salix brachista HOM05D019858 ORTHO05D010144 5.1e-11 73.2 381 28.3
RcHm_v2.0_Chr6g0255571 Rosa chinensis HOM05D014484 ORTHO05D017021 6.6e-11 72.8 379 28.0
TAR626G0659 Trochodendron aralioides HOM05D008268 ORTHO05D010144 8.6e-11 72.4 369 27.6
Cpa.g.sc12.16 Carica papaya HOM05D008268 ORTHO05D010144 1.1e-10 72.0 365 30.1
Duzib170G0253 Durio zibethinus HOM05D008268 ORTHO05D010144 1.5e-10 71.6 391 28.6
Migut.M01849 Erythranthe guttata HOM05D008268 ORTHO05D010144 1.5e-10 71.6 319 27.9
Nn1g06831 Nelumbo nucifera HOM05D008268 ORTHO05D010144 2.5e-10 70.9 350 30.3
Thecc.07G068700 Theobroma cacao HOM05D008268 ORTHO05D010144 2.5e-10 70.9 375 29.3
CSS0042196 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 3.3e-10 70.5 174 36.2
Actinidia09966 Actinidia chinensis HOM05D008268 ORTHO05D010144 4.3e-10 70.1 370 29.5
CSS0041304 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 4.3e-10 70.1 175 36.0
Gohir.A01G069900 Gossypium hirsutum HOM05D008268 ORTHO05D010144 5.6e-10 69.7 396 29.0
arahy.Tifrunner.gnm1.ann1.R70FHG Arachis hypogaea HOM05D008268 ORTHO05D010144 1.2e-09 68.6 340 27.9
Gorai.002G077500 Gossypium raimondii HOM05D008268 ORTHO05D010144 3.6e-09 67.0 393 28.8
FAN15G0243 Fragaria x ananassa HOM05D014484 ORTHO05D017021 1.1e-08 65.5 365 27.7
Glyma.12G217800 Glycine max HOM05D008268 ORTHO05D010144 3.1e-08 63.9 252 30.2
Potri.001G409000 Populus trichocarpa HOM05D019858 ORTHO05D010144 6.9e-08 62.8 382 27.2
FAN27G0943 Fragaria x ananassa HOM05D014484 ORTHO05D017021 8.9e-08 62.4 374 28.1
arahy.Tifrunner.gnm1.ann1.Y898LB Arachis hypogaea HOM05D008268 ORTHO05D010144 1.5e-07 61.6 341 26.7
Nitab4.5_0001252g0050 Nicotiana tabacum HOM05D015394 ORTHO05D017774 4.4e-07 60.1 386 26.9
TWI38G2068 Tripterygium wilfordii HOM05D008268 ORTHO05D010144 4.4e-07 60.1 408 27.7
Nitab4.5_0000297g0210 Nicotiana tabacum HOM05D015394 ORTHO05D017774 5.8e-07 59.7 219 32.0
Solyc07g063670.2 Solanum lycopersicum HOM05D015394 ORTHO05D017774 9.9e-07 58.9 374 24.9
Sopen07g031850 Solanum pennellii HOM05D015394 ORTHO05D017774 9.9e-07 58.9 344 25.3
Gohir.D01G057100 Gossypium hirsutum HOM05D008268 ORTHO05D010144 1.3e-06 58.5 372 28.5
Oeu061273.1 Olea europaea HOM05D008268 ORTHO05D010144 1.3e-06 58.5 225 28.9
Potri.011G125600 Populus trichocarpa HOM05D019858 ORTHO05D010144 1.7e-06 58.2 385 27.8
Sabra11G0111900 Salix brachista HOM05D019858 ORTHO05D010144 3.8e-06 57.0 394 25.9
THA.LOC104809278 Tarenaya hassleriana HOM05D010655 ORTHO05D012747 3.8e-06 57.0 323 26.0
ClCG11G018600 Citrullus lanatus HOM05D008268 ORTHO05D010144 4.9e-06 56.6 391 27.4
FvH4_2g05340 Fragaria vesca HOM05D014484 ORTHO05D017021 4.9e-06 56.6 356 27.8
FAN24G1810 Fragaria x ananassa HOM05D014484 ORTHO05D017021 4.9e-06 56.6 356 27.8


User provided reference genes

Program Settings