Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G1250 Cannabis sativa HOM05D006345 ORTHO05D007428 4.0e-122 441.4 220 100.0
Nn3g17198 Nelumbo nucifera HOM05D006345 ORTHO05D007428 6.2e-99 364.4 216 79.6
QL08p052794 Quercus lobata HOM05D006345 ORTHO05D007428 3.1e-98 362.1 219 79.0
CSS0008102 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 2.0e-97 359.4 216 78.7
CiPaw.01G263700 Carya illinoinensis HOM05D006345 ORTHO05D007428 3.4e-97 358.6 217 78.8
Rhsim13G0136400 Rhododendron simsii HOM05D006345 ORTHO05D007428 2.9e-96 355.5 217 78.8
FvH4_3g13390 Fragaria vesca HOM05D006345 ORTHO05D007428 4.9e-96 354.8 219 79.0
FAN21G0075 Fragaria x ananassa HOM05D006345 ORTHO05D007428 4.9e-96 354.8 219 79.0
Duzib212G0272 Durio zibethinus HOM05D006345 ORTHO05D007428 6.4e-96 354.4 217 78.3
Ca_19950_v3 Cicer arietinum L. HOM05D006345 ORTHO05D007428 1.1e-95 353.6 216 78.7
Lalb_Chr07g0189941 Lupinus albus HOM05D006345 ORTHO05D007428 1.4e-95 353.2 216 79.2
Sc05g0003040 Simmondsia chinensis HOM05D006345 ORTHO05D007428 1.4e-95 353.2 219 77.6
Ciclev10016345m.g Citrus clementina HOM05D006345 ORTHO05D007428 1.9e-95 352.8 219 77.2
FAN11G3812 Fragaria x ananassa HOM05D006345 ORTHO05D007428 3.2e-95 352.1 219 78.5
Migut.D00572 Erythranthe guttata HOM05D006345 ORTHO05D007428 4.2e-95 351.7 214 76.6
Psat7g230920 Pisum sativum HOM05D006345 ORTHO05D007428 4.2e-95 351.7 215 78.6
Cpa.g.sc12.137 Carica papaya HOM05D006345 ORTHO05D007428 5.4e-95 351.3 219 76.7
FAN25G2350 Fragaria x ananassa HOM05D006345 ORTHO05D007428 5.4e-95 351.3 219 78.5
MD05G1242200 Malus domestica HOM05D006345 ORTHO05D007428 9.3e-95 350.5 219 77.2
EL10Ac3g05939 Beta vulgaris HOM05D006345 ORTHO05D007428 1.2e-94 350.1 219 75.3
Sed0017834 Sechium edule HOM05D006345 ORTHO05D007428 1.6e-94 349.7 217 77.9
TAR624G0710 Trochodendron aralioides HOM05D006345 ORTHO05D007428 1.6e-94 349.7 219 75.8
Lalb_Chr13g0291791 Lupinus albus HOM05D006345 ORTHO05D007428 2.1e-94 349.4 217 78.8
MBI16_g30839_MAGBIO Magnolia biondii HOM05D006345 ORTHO05D007428 2.1e-94 349.4 214 77.6
Medtr4g024860 Medicago truncatula HOM05D000001 ORTHO05D000003 2.1e-94 349.4 214 79.0
arahy.Tifrunner.gnm1.ann1.S1VR06 Arachis hypogaea HOM05D006345 ORTHO05D007428 2.7e-94 349.0 214 79.0
Sed0021159 Sechium edule HOM05D006345 ORTHO05D007428 3.5e-94 348.6 215 76.7
ClCG02G007550 Citrullus lanatus HOM05D006345 ORTHO05D007428 4.6e-94 348.2 215 76.7
Phvul.003G037201 Phaseolus vulgaris HOM05D006345 ORTHO05D007428 4.6e-94 348.2 214 78.5
PGSC0003DMG400023836 Solanum tuberosum HOM05D006345 ORTHO05D007428 4.6e-94 348.2 216 77.8
COL.COLO4_13882 Corchorus olitorius HOM05D006345 ORTHO05D007428 6.0e-94 347.8 217 77.9
CiPaw.14G048700 Carya illinoinensis HOM05D006345 ORTHO05D007428 7.9e-94 347.4 219 75.3
DCAR_001254 Daucus carota HOM05D006345 ORTHO05D007428 7.9e-94 347.4 215 77.7
FAN16G3736 Fragaria x ananassa HOM05D006345 ORTHO05D007428 7.9e-94 347.4 219 78.1
Manes.16G061100 Manihot esculenta HOM05D006345 ORTHO05D007428 1.0e-93 347.1 217 76.5
arahy.Tifrunner.gnm1.ann1.P3RVZQ Arachis hypogaea HOM05D006345 ORTHO05D007428 1.3e-93 346.7 214 79.0
arahy.Tifrunner.gnm1.ann1.W97VC3 Arachis hypogaea HOM05D006345 ORTHO05D007428 1.3e-93 346.7 214 78.5
Prupe.4G121300 Prunus persica HOM05D006345 ORTHO05D007428 1.3e-93 346.7 219 75.8
Nitab4.5_0001925g0110 Nicotiana tabacum HOM05D006345 ORTHO05D007428 1.7e-93 346.3 216 76.9
RcHm_v2.0_Chr5g0022101 Rosa chinensis HOM05D006345 ORTHO05D007428 1.7e-93 346.3 219 76.7
TPR.G7580 Trifolium pratense HOM05D006345 ORTHO05D007428 1.7e-93 346.3 214 79.0
arahy.Tifrunner.gnm1.ann1.G9BQRV Arachis hypogaea HOM05D006345 ORTHO05D007428 2.3e-93 345.9 214 78.5
Ah.07g202050 Amaranthus hybridus HOM05D006345 ORTHO05D007428 3.0e-93 345.5 217 74.7
Glyma.03G027700 Glycine max HOM05D006345 ORTHO05D007428 3.0e-93 345.5 216 78.2
TWI53G2073 Tripterygium wilfordii HOM05D006345 ORTHO05D007428 3.0e-93 345.5 219 75.8
Nitab4.5_0008647g0020 Nicotiana tabacum HOM05D006345 ORTHO05D007428 3.9e-93 345.1 216 77.3
Cc09_g04580 Coffea canephora HOM05D006345 ORTHO05D007428 5.1e-93 344.7 219 73.5
Dinv19690 Davidia involucrata HOM05D006345 ORTHO05D007428 5.1e-93 344.7 219 75.8
Gohir.A10G163600 Gossypium hirsutum HOM05D006345 ORTHO05D007428 8.7e-93 344.0 217 76.0
MELO3C018575.2 Cucumis melo HOM05D006345 ORTHO05D007428 1.1e-92 343.6 217 74.7
Potri.001G073700 Populus trichocarpa HOM05D006345 ORTHO05D007428 1.5e-92 343.2 219 77.2
Lj3g0013440 Lotus japonicus HOM05D006345 ORTHO05D007428 1.9e-92 342.8 216 76.9
Gorai.011G189500 Gossypium raimondii HOM05D006345 ORTHO05D007428 2.5e-92 342.4 217 75.6
Thecc.04G283900 Theobroma cacao HOM05D006345 ORTHO05D007428 3.3e-92 342.0 217 76.5
Glyma.01G139633 Glycine max HOM05D006345 ORTHO05D007428 4.3e-92 341.7 216 77.3
CsaV3_7G007230 Cucumis sativus L. HOM05D006345 ORTHO05D007428 5.6e-92 341.3 217 74.7
Sabra01G0052000 Salix brachista HOM05D006345 ORTHO05D007428 5.6e-92 341.3 219 77.2
SalBow7G0027 Salvia bowleyana HOM05D006345 ORTHO05D007428 7.4e-92 340.9 217 75.1
AUR62015383 Chenopodium quinoa HOM05D006345 ORTHO05D007428 1.3e-91 340.1 216 74.5
PGR042G3945 Punica granatum HOM05D006345 ORTHO05D007428 1.6e-91 339.7 217 75.1
THA.LOC104822694 Tarenaya hassleriana HOM05D006345 ORTHO05D007428 1.6e-91 339.7 217 77.9
PSO675G7514 Papaver somniferum HOM05D006345 ORTHO05D007428 2.1e-91 339.3 221 74.7
Peaxi162Scf00062g10131 Petunia axillaris HOM05D006345 ORTHO05D007428 2.1e-91 339.3 216 75.9
VMungo1383G2204 Vigna mungo HOM05D006345 ORTHO05D007428 2.1e-91 339.3 214 76.6
CAN.G575.62 Capsicum annuum HOM05D006345 ORTHO05D007428 4.8e-91 338.2 219 74.4
Cc06_g02140 Coffea canephora HOM05D006345 ORTHO05D007428 4.8e-91 338.2 219 72.1
Ah.15g099610 Amaranthus hybridus HOM05D006345 ORTHO05D007428 6.2e-91 337.8 219 73.5
Sopen12g034690 Solanum pennellii HOM05D006345 ORTHO05D007428 6.2e-91 337.8 214 76.2
Aqoxy7G02153 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 8.1e-91 337.4 219 72.1
ECA238G2485 Erigeron canadensis HOM05D006345 ORTHO05D007428 8.1e-91 337.4 216 74.1
Oeu012935.1 Olea europaea HOM05D006345 ORTHO05D007428 1.1e-90 337.0 216 74.1
PSO782G3410 Papaver somniferum HOM05D006345 ORTHO05D007428 1.4e-90 336.7 221 74.2
MSTRG.21400 Avicennia marina HOM05D006345 ORTHO05D007428 2.4e-90 335.9 212 75.0
Gohir.D10G170000 Gossypium hirsutum HOM05D006345 ORTHO05D007428 4.0e-90 335.1 217 73.3
SalBow2G1193 Salvia bowleyana HOM05D006345 ORTHO05D007428 4.0e-90 335.1 217 74.2
CDE04G1044 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 5.3e-90 334.7 217 73.3
Oeu017184.1 Olea europaea HOM05D006345 ORTHO05D007428 5.3e-90 334.7 216 75.5
Eucgr.F03783 Eucalyptus grandis HOM05D006345 ORTHO05D007428 1.5e-89 333.2 216 74.1
AT3G13440 Arabidopsis thaliana HOM05D006345 ORTHO05D007428 3.4e-89 332.0 216 74.5
unitig_52.g17581 Utricularia gibba HOM05D006345 ORTHO05D007428 7.6e-89 330.9 219 69.9
HanXRQChr14g0447431 Helianthus annuus HOM05D006345 ORTHO05D007428 9.9e-89 330.5 216 70.8
AL3G25340 Arabidopsis lyrata HOM05D006345 ORTHO05D007428 1.3e-88 330.1 216 75.0
Carub.0003s1288 Capsella rubella HOM05D006345 ORTHO05D007428 1.3e-88 330.1 218 73.9
PSO541G0968 Papaver somniferum HOM05D006345 ORTHO05D007428 1.3e-88 330.1 221 73.3
CDE06G0136 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 1.7e-88 329.7 216 71.8
Aqoxy3G02382 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 2.2e-88 329.3 219 71.7
CARHR088090 Cardamine hirsuta HOM05D006345 ORTHO05D007428 2.9e-88 328.9 217 75.1
Lsat_1_v5_gn_3_103240 Lactuca sativa HOM05D006345 ORTHO05D007428 1.1e-87 327.0 217 71.0
Thhalv10021414m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 3.2e-87 325.5 219 73.1
Aa31LG8G650 Aethionema arabicum HOM05D006345 ORTHO05D007428 5.5e-87 324.7 217 72.4
Carub.0006s3398 Capsella rubella HOM05D006345 ORTHO05D007428 5.5e-87 324.7 216 72.7
SGA_v2.0_scaffold8G04616 Striga asiatica HOM05D006345 ORTHO05D007428 3.5e-86 322.0 214 72.0
BcaC09g48312 Brassica carinata HOM05D006345 ORTHO05D007428 4.6e-86 321.6 219 71.7
C01p51620 Brassica napus HOM05D006345 ORTHO05D007428 4.6e-86 321.6 219 71.7
BolC1t05105H Brassica oleracea HOM05D006345 ORTHO05D007428 4.6e-86 321.6 219 71.7
Sp3g11640 Schrenkiella parvula HOM05D006345 ORTHO05D007428 4.6e-86 321.6 219 71.7
ATR0561G247 Amborella trichopoda HOM05D006345 ORTHO05D007428 3.0e-85 318.9 214 69.2
BcaB04g21015 Brassica carinata HOM05D006345 ORTHO05D007428 1.1e-84 317.0 219 70.8
A01p40130 Brassica napus HOM05D006345 ORTHO05D007428 1.1e-84 317.0 219 70.8
BraA01t04054Z Brassica rapa HOM05D006345 ORTHO05D007428 1.9e-84 316.2 219 70.3
HPP92_018755 Vanilla planifolia HOM05D006345 ORTHO05D007428 2.5e-84 315.8 212 70.8
BraA05t22416Z Brassica rapa HOM05D002140 ORTHO05D007428 8.1e-83 310.8 215 70.2
BcaC05g29179 Brassica carinata HOM05D002140 ORTHO05D007428 1.1e-82 310.5 216 69.9
C05p54470 Brassica napus HOM05D002140 ORTHO05D007428 1.1e-82 310.5 216 69.9
BolC5t34114H Brassica oleracea HOM05D002140 ORTHO05D007428 1.1e-82 310.5 216 69.9
A05p36090 Brassica napus HOM05D002140 ORTHO05D007428 5.3e-82 308.1 215 69.3
SHI16738 Sapria himalayana HOM05D006345 ORTHO05D007428 1.2e-81 307.0 210 71.0
Os03g0824200 Oryza sativa ssp. japonica HOM05D006345 ORTHO05D007428 8.4e-80 300.8 211 66.4
Lsat_1_v5_gn_2_63801 Lactuca sativa HOM05D006345 ORTHO05D007428 1.6e-78 296.6 217 66.8
Pp3c9_17440 Physcomitrium patens HOM05D006345 ORTHO05D007428 1.0e-77 293.9 210 66.2
Mapoly0069s0066 Marchantia polymorpha HOM05D006345 ORTHO05D007428 5.1e-77 291.6 215 64.7
Zm00001eb211470 Zea mays HOM05D006345 ORTHO05D007428 2.8e-75 285.8 210 65.2
SMO358G0200 Selaginella moellendorffii HOM05D006345 ORTHO05D007428 1.2e-73 280.4 215 63.3
AUR62002307 Chenopodium quinoa HOM05D006345 ORTHO05D007428 4.5e-73 278.5 219 63.5
Thhalv10009961m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 1.0e-72 277.3 219 63.9
Solyc12g100070.3 Solanum lycopersicum HOM05D006345 ORTHO05D007428 2.9e-72 275.8 180 73.9
CBR_g45447 Chara braunii HOM05D006345 ORTHO05D007428 1.4e-71 273.5 212 61.3
AagrBONN_evm.TU.Sc2ySwM_117.4015 Anthoceros agrestis HOM05D006345 ORTHO05D007428 2.7e-70 269.2 210 61.0
Zm00001eb187530 Zea mays HOM05D006345 ORTHO05D007428 8.8e-61 237.7 186 63.4
SEGI_21458 Sequoiadendron giganteum HOM05D006345 ORTHO05D007428 6.3e-59 231.5 164 69.5
CAN.G1126.44 Capsicum annuum HOM05D006345 ORTHO05D007428 1.5e-47 193.7 189 54.5
Cre01.g036750 Chlamydomonas reinhardtii HOM05D006345 ORTHO05D007428 2.7e-46 189.5 213 47.9
Zm00001eb141630 Zea mays HOM05D006345 ORTHO05D007428 4.5e-41 172.2 145 61.4
CSS0000171 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 2.5e-39 166.4 100 75.0
Potri.003G157201 Populus trichocarpa HOM05D006345 ORTHO05D007428 3.7e-35 152.5 116 66.4
MCO02G297 Micromonas commoda HOM05D006345 ORTHO05D007428 3.2e-31 139.4 167 43.7
Sabra03G0114100 Salix brachista HOM05D000029 ORTHO05D000854 3.6e-30 136.0 191 43.5
Zm00001eb356470 Zea mays HOM05D006345 ORTHO05D007428 1.7e-27 127.1 99 62.6
ATR0006G036 Amborella trichopoda HOM05D006345 ORTHO05D007428 1.0e-13 81.3 48 70.8
Lj1P1152T38 Lonicera japonica HOM05D006345 ORTHO05D007428 5.4e-10 68.9 47 63.8


User provided reference genes

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