Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G1249 Cannabis sativa HOM05D003020 ORTHO05D003226 1.1e-159 566.6 294 100.0
Prupe.1G086100 Prunus persica HOM05D003020 ORTHO05D003226 1.1e-55 221.1 271 52.4
Haze_22098 Corylus avellana HOM05D003020 ORTHO05D003226 6.2e-54 215.3 283 52.3
RcHm_v2.0_Chr4g0402471 Rosa chinensis HOM05D003020 ORTHO05D003226 6.2e-54 215.3 274 55.8
Cfa013505 Carpinus fangiana HOM05D003020 ORTHO05D003226 1.1e-53 214.5 285 53.3
FvH4_4g08220 Fragaria vesca HOM05D003020 ORTHO05D003226 3.1e-53 213.0 286 51.7
FAN12G0399 Fragaria x ananassa HOM05D003020 ORTHO05D003226 3.1e-53 213.0 286 51.7
Cpa.g.sc95.49 Carica papaya HOM05D003020 ORTHO05D003226 4.0e-53 212.6 265 52.1
MD13G1253900 Malus domestica HOM05D003020 ORTHO05D003226 7.6e-52 208.4 280 52.9
FAN07G1960 Fragaria x ananassa HOM05D003020 ORTHO05D003226 3.2e-50 203.0 281 49.5
FAN17G2997 Fragaria x ananassa HOM05D003020 ORTHO05D003226 4.2e-50 202.6 281 49.1
FAN22G0428 Fragaria x ananassa HOM05D003020 ORTHO05D003226 7.1e-50 201.8 281 49.1
CsaV3_1G031590 Cucumis sativus L. HOM05D003020 ORTHO05D003226 2.3e-48 196.8 269 49.4
MD16G1257900 Malus domestica HOM05D003020 ORTHO05D003226 1.1e-47 194.5 268 51.9
MELO3C017464.2 Cucumis melo HOM05D003020 ORTHO05D003226 3.3e-47 193.0 270 49.6
Thecc.09G173200 Theobroma cacao HOM05D003020 ORTHO05D003226 5.6e-47 192.2 270 48.1
ClCG06G013330 Citrullus lanatus HOM05D003020 ORTHO05D003226 7.4e-47 191.8 269 49.4
Gohir.D08G094000 Gossypium hirsutum HOM05D003020 ORTHO05D003226 9.6e-47 191.4 274 47.8
QL02p097728 Quercus lobata HOM05D003020 ORTHO05D003226 1.3e-46 191.0 288 50.0
CiPaw.07G192300 Carya illinoinensis HOM05D003020 ORTHO05D003226 1.6e-46 190.7 284 46.1
Gohir.A08G084400 Gossypium hirsutum HOM05D003020 ORTHO05D003226 3.7e-46 189.5 274 48.2
COL.COLO4_35897 Corchorus olitorius HOM05D003020 ORTHO05D003226 1.8e-45 187.2 269 47.6
CiPaw.05G049400 Carya illinoinensis HOM05D003020 ORTHO05D003226 2.4e-45 186.8 282 48.9
Ca_21174_v3 Cicer arietinum L. HOM05D003020 ORTHO05D003226 7.6e-44 181.8 279 47.3
Ca_21223_v3 Cicer arietinum L. HOM05D003020 ORTHO05D003226 7.6e-44 181.8 279 47.3
CiPaw.08G036400 Carya illinoinensis HOM05D003020 ORTHO05D003226 2.2e-43 180.3 261 47.5
Medtr4g128160 Medicago truncatula HOM05D003020 ORTHO05D003226 3.8e-43 179.5 274 45.6
Sed0018084 Sechium edule HOM05D003020 ORTHO05D003226 8.4e-43 178.3 262 47.7
Duzib168G2116 Durio zibethinus HOM05D003020 ORTHO05D003226 7.1e-42 175.3 282 45.0
Manes.14G153300 Manihot esculenta HOM05D003020 ORTHO05D003226 6.0e-41 172.2 283 45.6
PGR102G0964 Punica granatum HOM05D003020 ORTHO05D003226 2.3e-40 170.2 289 46.7
Potri.006G168400 Populus trichocarpa HOM05D003020 ORTHO05D003226 3.0e-40 169.9 258 48.8
Duzib170G0355 Durio zibethinus HOM05D003020 ORTHO05D003226 5.1e-40 169.1 272 46.0
Hma1.2p1_1025F.1_g249270 Hydrangea macrophylla HOM05D003020 ORTHO05D003226 5.1e-40 169.1 280 44.6
Psat0s2889g0080 Pisum sativum HOM05D003020 ORTHO05D003226 6.7e-40 168.7 295 45.1
Oeu042166.1 Olea europaea HOM05D003020 ORTHO05D003226 8.7e-40 168.3 269 47.2
TAR625G0330 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.1e-39 167.9 279 45.9
Duzib150G1089 Durio zibethinus HOM05D003020 ORTHO05D003226 1.9e-39 167.2 282 44.3
Ciclev10010819m.g Citrus clementina HOM05D003020 ORTHO05D003226 4.3e-39 166.0 301 43.2
Glyma.20G083700 Glycine max HOM05D003020 ORTHO05D003226 5.7e-39 165.6 276 45.7
Manes.14G153500 Manihot esculenta HOM05D003020 ORTHO05D003226 5.7e-39 165.6 261 47.5
Eucgr.C02308 Eucalyptus grandis HOM05D003020 ORTHO05D003226 2.1e-38 163.7 278 43.9
TAR636G2901 Trochodendron aralioides HOM05D003020 ORTHO05D003226 3.7e-38 162.9 284 44.4
Glyma.17G063300 Glycine max HOM05D003020 ORTHO05D003226 1.1e-37 161.4 269 46.1
VMungo1215G0012 Vigna mungo HOM05D003020 ORTHO05D003226 1.8e-37 160.6 269 43.9
Manes.14G153400 Manihot esculenta HOM05D003020 ORTHO05D003226 2.4e-37 160.2 251 48.2
Dinv41250 Davidia involucrata HOM05D003020 ORTHO05D003226 3.1e-37 159.8 258 45.7
TPR.G5404 Trifolium pratense HOM05D003020 ORTHO05D003226 5.3e-37 159.1 309 41.7
Gorai.004G031500 Gossypium raimondii HOM05D003020 ORTHO05D003226 1.5e-36 157.5 269 43.1
Lalb_Chr12g0199391 Lupinus albus HOM05D003020 ORTHO05D003226 1.5e-36 157.5 273 42.9
Phvul.003G146000 Phaseolus vulgaris HOM05D003020 ORTHO05D003226 2.6e-36 156.8 254 44.5
Actinidia04141 Actinidia chinensis HOM05D003020 ORTHO05D003226 3.4e-36 156.4 269 42.4
Potri.018G092800 Populus trichocarpa HOM05D003020 ORTHO05D003226 4.5e-36 156.0 259 47.9
Eucgr.C00156 Eucalyptus grandis HOM05D003020 ORTHO05D003226 5.9e-36 155.6 274 44.2
Atru.chr7.633 Acer truncatum HOM05D003020 ORTHO05D003226 1.0e-35 154.8 283 46.6
Sabra06G0129900 Salix brachista HOM05D003020 ORTHO05D003226 1.9e-34 150.6 205 51.7
Gohir.D08G033900 Gossypium hirsutum HOM05D003020 ORTHO05D003226 2.5e-34 150.2 269 42.4
Gohir.A08G023400 Gossypium hirsutum HOM05D003020 ORTHO05D003226 7.2e-34 148.7 268 41.8
Gorai.004G099800 Gossypium raimondii HOM05D003020 ORTHO05D003226 2.3e-32 143.7 155 56.1
TAR383G0860 Trochodendron aralioides HOM05D003020 ORTHO05D003226 6.7e-32 142.1 282 43.3
Sabra18G0080000 Salix brachista HOM05D003020 ORTHO05D003226 1.1e-31 141.4 231 48.1
Sed0024933 Sechium edule HOM05D003020 ORTHO05D003226 1.1e-31 141.4 278 40.6
TAR383G0645 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.5e-31 141.0 260 43.1
Lj4g0004544 Lotus japonicus HOM05D003020 ORTHO05D003226 1.6e-30 137.5 289 40.5
Rhsim01G0004800 Rhododendron simsii HOM05D003020 ORTHO05D003226 2.8e-30 136.7 263 40.3
TAR383G0698 Trochodendron aralioides HOM05D003020 ORTHO05D003226 3.1e-29 133.3 274 41.2
Oeu004196.1 Olea europaea HOM05D003020 ORTHO05D003226 4.1e-29 132.9 248 43.1
Dinv42724 Davidia involucrata HOM05D003020 ORTHO05D003226 5.3e-29 132.5 271 41.0
Dinv43377 Davidia involucrata HOM05D003020 ORTHO05D003226 5.3e-29 132.5 271 41.0
Lalb_Chr07g0180461 Lupinus albus HOM05D003020 ORTHO05D003226 1.5e-28 131.0 256 40.6
TWI63G1498 Tripterygium wilfordii HOM05D003020 ORTHO05D003226 3.4e-28 129.8 267 40.1
TWI34G0269 Tripterygium wilfordii HOM05D003020 ORTHO05D003226 1.0e-27 128.3 272 42.6
Aqoxy7G03070 Aquilegia oxysepala HOM05D003020 ORTHO05D003226 2.2e-27 127.1 278 38.1
DCAR_017969 Daucus carota HOM05D003020 ORTHO05D003226 2.5e-26 123.6 264 39.4
DCAR_014702 Daucus carota HOM05D003020 ORTHO05D003226 9.4e-26 121.7 271 37.6
Lsat_1_v5_gn_7_54521 Lactuca sativa HOM05D003020 ORTHO05D003226 9.4e-26 121.7 253 41.9
Lj9P685T21 Lonicera japonica HOM05D003020 ORTHO05D003226 9.4e-26 121.7 234 41.9
Thhalv10026023m.g Eutrema salsugineum HOM05D003020 ORTHO05D003226 2.1e-25 120.6 278 37.4
Nn2g12774 Nelumbo nucifera HOM05D003020 ORTHO05D003226 2.7e-25 120.2 261 40.6
Ciclev10010534m.g Citrus clementina HOM05D003020 ORTHO05D003226 7.9e-25 118.6 284 38.7
THA.LOC104803497 Tarenaya hassleriana HOM05D003020 ORTHO05D003226 2.3e-24 117.1 271 39.5
MSTRG.6214 Avicennia marina HOM05D003020 ORTHO05D003226 5.1e-24 115.9 218 42.7
Migut.J01478 Erythranthe guttata HOM05D003020 ORTHO05D003226 1.1e-23 114.8 269 40.5
BraA03t15021Z Brassica rapa HOM05D003020 ORTHO05D003226 3.3e-23 113.2 291 36.8
AL7G21920 Arabidopsis lyrata HOM05D003020 ORTHO05D003226 4.4e-23 112.8 270 37.4
A03p59690 Brassica napus HOM05D003020 ORTHO05D003226 5.7e-23 112.5 291 36.1
ECA240G3460 Erigeron canadensis HOM05D003020 ORTHO05D003226 1.3e-22 111.3 279 37.3
MBI14_g17368_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D000358 1.3e-22 111.3 270 37.4
AT4G30230 Arabidopsis thaliana HOM05D003020 ORTHO05D003226 2.2e-22 110.5 291 36.8
Sp7g28110 Schrenkiella parvula HOM05D003020 ORTHO05D003226 2.8e-22 110.2 276 37.0
Oeu025224.1 Olea europaea HOM05D003020 ORTHO05D003226 3.7e-22 109.8 262 34.0
Carub.0007s1038 Capsella rubella HOM05D003020 ORTHO05D003226 4.8e-22 109.4 275 36.0
Lj9C24T7 Lonicera japonica HOM05D003020 ORTHO05D003226 4.8e-22 109.4 261 36.4
Lj9A26T13 Lonicera japonica HOM05D003020 ORTHO05D003226 6.3e-22 109.0 261 36.0
Lsat_1_v5_gn_5_84881 Lactuca sativa HOM05D003020 ORTHO05D003226 1.8e-21 107.5 255 39.6
BcaNung03008 Brassica carinata HOM05D003020 ORTHO05D003226 5.3e-21 105.9 262 34.7
CARHR238140 Cardamine hirsuta HOM05D003020 ORTHO05D003226 1.2e-20 104.8 260 37.7
HanXRQChr09g0244991 Helianthus annuus HOM05D003020 ORTHO05D003226 3.4e-20 103.2 306 32.7
A01p07910 Brassica napus HOM05D003020 ORTHO05D003226 4.5e-20 102.8 259 34.4
BraA01t00737Z Brassica rapa HOM05D003020 ORTHO05D003226 4.5e-20 102.8 259 34.4
THA.LOC104819978 Tarenaya hassleriana HOM05D003020 ORTHO05D003226 4.5e-20 102.8 269 37.2
C07p57710 Brassica napus HOM05D003020 ORTHO05D003226 7.7e-20 102.1 261 35.2
BolC7t46232H Brassica oleracea HOM05D003020 ORTHO05D003226 7.7e-20 102.1 261 35.2
BcaC09g51805 Brassica carinata HOM05D003020 ORTHO05D003226 2.2e-19 100.5 262 33.2
C01p08830 Brassica napus HOM05D003020 ORTHO05D003226 2.2e-19 100.5 262 33.2
BolC1t00873H Brassica oleracea HOM05D003020 ORTHO05D003226 2.2e-19 100.5 262 33.2
SalBow6G2220 Salvia bowleyana HOM05D003020 ORTHO05D003226 2.9e-19 100.1 260 35.4
Migut.K00242 Erythranthe guttata HOM05D003020 ORTHO05D003226 3.8e-19 99.8 279 32.3
ECA234G3857 Erigeron canadensis HOM05D003020 ORTHO05D003226 6.5e-19 99.0 261 36.0
PSO170G3450 Papaver somniferum HOM05D003020 ORTHO05D003226 8.5e-19 98.6 276 33.3
TAR383G0288 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.9e-18 97.4 276 35.9
FAN10G0626 Fragaria x ananassa HOM05D003020 ORTHO05D003226 2.5e-18 97.1 281 34.5
TAR626G0085 Trochodendron aralioides HOM05D003020 ORTHO05D003226 4.2e-18 96.3 268 35.4
Aa31LG2G20290 Aethionema arabicum HOM05D003020 ORTHO05D003226 6.1e-17 92.4 261 36.0
TAR626G1849 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.8e-16 90.9 271 33.6
FvH4_7g20070 Fragaria vesca HOM05D003020 ORTHO05D003226 2.3e-16 90.5 281 33.5
FAN03G1700 Fragaria x ananassa HOM05D003020 ORTHO05D003226 2.3e-16 90.5 281 33.8
FAN06G0496 Fragaria x ananassa HOM05D003020 ORTHO05D003226 2.3e-16 90.5 281 33.5
Dinv31353 Davidia involucrata HOM05D003020 ORTHO05D003226 4.4e-15 86.3 238 32.8
Potri.008G043300 Populus trichocarpa HOM05D003020 ORTHO05D003226 1.3e-14 84.7 266 33.1
MBI16_g42581_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D003226 2.2e-14 84.0 248 33.1
Dinv31354 Davidia involucrata HOM05D003020 ORTHO05D003226 6.3e-14 82.4 267 30.3
Prupe.2G217400 Prunus persica HOM05D003020 ORTHO05D003226 8.2e-14 82.0 273 32.6
MBI16_g41356_MAGBIO Magnolia biondii HOM05D003020 ORTHO05D003226 2.4e-13 80.5 248 33.1
BcaNung00532 Brassica carinata HOM05D003020 ORTHO05D003226 5.3e-13 79.3 259 33.2
RcHm_v2.0_Chr1g0364021 Rosa chinensis HOM05D003020 ORTHO05D003226 9.1e-13 78.6 288 30.2
Sabra10G0168900 Salix brachista HOM05D003020 ORTHO05D003226 1.2e-12 78.2 262 32.1
AUR62033218 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.0e-12 77.4 222 34.7
Haze_16927 Corylus avellana HOM05D003020 ORTHO05D003226 2.6e-12 77.0 272 32.4
Sabra08G0029900 Salix brachista HOM05D003020 ORTHO05D003226 2.6e-12 77.0 266 31.6
Potri.010G218300 Populus trichocarpa HOM05D003020 ORTHO05D003226 5.9e-12 75.9 259 31.7
QL08p056680 Quercus lobata HOM05D003020 ORTHO05D003226 7.7e-12 75.5 279 30.1
SGA_v2.0_scaffold17G07929 Striga asiatica HOM05D003020 ORTHO05D003226 7.7e-12 75.5 282 29.8
Actinidia02960 Actinidia chinensis HOM05D003020 ORTHO05D003226 2.9e-11 73.6 255 31.0
Eucgr.J01114 Eucalyptus grandis HOM05D003020 ORTHO05D003226 2.9e-11 73.6 250 31.2
Dinv11796 Davidia involucrata HOM05D000336 ORTHO05D002705 3.8e-11 73.2 259 25.9
TPR.G1799 Trifolium pratense HOM05D003020 ORTHO05D003226 5.0e-11 72.8 255 27.8
Actinidia02961 Actinidia chinensis HOM05D003020 ORTHO05D003226 8.5e-11 72.0 271 29.9
ATR0580G303 Amborella trichopoda HOM05D003020 ORTHO05D003226 3.2e-10 70.1 261 30.3
Actinidia02963 Actinidia chinensis HOM05D003020 ORTHO05D003226 7.2e-10 68.9 238 32.4
Cc02_g11380 Coffea canephora HOM05D003020 ORTHO05D003226 7.2e-10 68.9 263 29.7
Actinidia07721 Actinidia chinensis HOM05D003020 ORTHO05D003226 1.2e-09 68.2 216 32.4
Manes.07G102900 Manihot esculenta HOM05D003020 ORTHO05D003226 1.6e-09 67.8 277 28.2
AUR62021300 Chenopodium quinoa HOM05D003020 ORTHO05D003226 2.1e-09 67.4 294 27.9
PGR044G1634 Punica granatum HOM05D003020 ORTHO05D003226 2.1e-09 67.4 276 32.2
VMungo0720G0200 Vigna mungo HOM05D003020 ORTHO05D003226 2.7e-09 67.0 250 29.2
CiPaw.07G071600 Carya illinoinensis HOM05D003020 ORTHO05D003226 3.6e-09 66.6 263 28.1
Manes.10G043500 Manihot esculenta HOM05D003020 ORTHO05D003226 4.7e-09 66.2 250 29.6
Ah.09g229890 Amaranthus hybridus HOM05D003020 ORTHO05D003226 6.1e-09 65.9 269 30.5
CiPaw.02G176000 Carya illinoinensis HOM05D003020 ORTHO05D003226 8.0e-09 65.5 289 27.7
TWI15G1220 Tripterygium wilfordii HOM05D003020 ORTHO05D003226 8.0e-09 65.5 269 27.5
Eucgr.J01120 Eucalyptus grandis HOM05D003020 ORTHO05D003226 1.0e-08 65.1 267 30.3
Sabra16G0321600 Salix brachista HOM05D003020 ORTHO05D003226 1.0e-08 65.1 221 31.2
Sabra16G0323200 Salix brachista HOM05D003020 ORTHO05D003226 1.4e-08 64.7 221 31.2
Hma1.2p1_0453F.1_g156030 Hydrangea macrophylla HOM05D003020 ORTHO05D003226 1.8e-08 64.3 261 29.9
Duzib106G1942 Durio zibethinus HOM05D003020 ORTHO05D003226 2.3e-08 63.9 271 27.3
Prupe.2G217100 Prunus persica HOM05D010935 ORTHO05D010383 2.3e-08 63.9 266 27.1
ClCG09G020480 Citrullus lanatus HOM05D003020 ORTHO05D003226 3.0e-08 63.5 265 29.1
PGR044G1573 Punica granatum HOM05D003020 ORTHO05D003226 3.0e-08 63.5 262 30.5
DCAR_019362 Daucus carota HOM05D003020 ORTHO05D003226 4.0e-08 63.2 168 37.5
DCAR_031845 Daucus carota HOM05D003020 ORTHO05D003226 6.7e-08 62.4 154 38.3
FvH4_7g20060 Fragaria vesca HOM05D003020 ORTHO05D003226 8.8e-08 62.0 263 29.3
Nitab4.5_0000534g0060 Nicotiana tabacum HOM05D003020 ORTHO05D003226 8.8e-08 62.0 271 28.8
DCAR_006457 Daucus carota HOM05D011460 ORTHO05D010383 1.2e-07 61.6 213 30.5
FAN06G2932 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.2e-07 61.6 263 29.3
Lalb_Chr19g0129551 Lupinus albus HOM05D003020 ORTHO05D003226 1.5e-07 61.2 252 27.8
Thecc.10G069300 Theobroma cacao HOM05D003020 ORTHO05D003226 1.5e-07 61.2 294 27.6
CiPaw.01G275300 Carya illinoinensis HOM05D010935 ORTHO05D010383 2.0e-07 60.8 259 27.4
TWI38G1817 Tripterygium wilfordii HOM05D003020 ORTHO05D003226 2.6e-07 60.5 263 28.1
Cpa.g.sc53.28 Carica papaya HOM05D003020 ORTHO05D003226 3.3e-07 60.1 262 28.6
Actinidia07720 Actinidia chinensis HOM05D000283 ORTHO05D003226 4.4e-07 59.7 258 29.8
Lalb_Chr03g0036011 Lupinus albus HOM05D003020 ORTHO05D003226 4.4e-07 59.7 260 26.9
Medtr1g095730 Medicago truncatula HOM05D003020 ORTHO05D003226 4.4e-07 59.7 261 28.0
Ca_10586_v3 Cicer arietinum L. HOM05D003020 ORTHO05D003226 5.7e-07 59.3 266 27.1
MELO3C025508.2 Cucumis melo HOM05D003020 ORTHO05D003226 5.7e-07 59.3 244 30.3
Cfa001601 Carpinus fangiana HOM05D003020 ORTHO05D003226 7.5e-07 58.9 259 28.6
TPR.G16980 Trifolium pratense HOM05D003020 ORTHO05D003226 7.5e-07 58.9 275 25.8
Glyma.20G178000 Glycine max HOM05D003020 ORTHO05D003226 9.7e-07 58.5 258 27.9
Manes.10G043600 Manihot esculenta HOM05D003020 ORTHO05D003226 1.3e-06 58.2 291 28.2
CiPaw.01G275700 Carya illinoinensis HOM05D003020 ORTHO05D003226 1.7e-06 57.8 229 28.4
CsaV3_5G025940 Cucumis sativus L. HOM05D003020 ORTHO05D003226 1.7e-06 57.8 245 29.4
FAN01G0050 Fragaria x ananassa HOM05D003020 ORTHO05D003226 2.8e-06 57.0 264 28.8
FAN01G2565 Fragaria x ananassa HOM05D003020 ORTHO05D003226 2.8e-06 57.0 264 28.8
MD07G1177700 Malus domestica HOM05D010935 ORTHO05D010383 2.8e-06 57.0 123 30.9
Potri.010G218500 Populus trichocarpa HOM05D031226 ORTHO05D003226 3.7e-06 56.6 261 26.4
Sabra08G0029800 Salix brachista HOM05D031226 ORTHO05D037394 3.7e-06 56.6 256 28.1
SalBow4G1965 Salvia bowleyana HOM05D003020 ORTHO05D003226 4.8e-06 56.2 261 28.4
Duzib128G1476 Durio zibethinus HOM05D010162 ORTHO05D010383 8.2e-06 55.5 272 26.1


User provided reference genes

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