Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G1244 Cannabis sativa HOM05D005825 ORTHO05D006483 1.1e-181 639.8 325 100.0
Dinv36528 Davidia involucrata HOM05D005825 ORTHO05D006483 1.3e-140 503.4 327 78.9
ClCG11G003030 Citrullus lanatus HOM05D005825 ORTHO05D006483 1.8e-139 499.6 322 78.6
Sed0008025 Sechium edule HOM05D005825 ORTHO05D006483 1.2e-138 496.9 322 75.2
MELO3C004508.2 Cucumis melo HOM05D005825 ORTHO05D006483 5.9e-138 494.6 322 77.0
Cpa.g.sc75.29 Carica papaya HOM05D005825 ORTHO05D006483 1.0e-137 493.8 322 75.5
CsaV3_2G002850 Cucumis sativus L. HOM05D005825 ORTHO05D006483 6.5e-137 491.1 322 77.3
Phvul.003G164300 Phaseolus vulgaris HOM05D005825 ORTHO05D006483 7.9e-135 484.2 325 74.8
Nn2g12789 Nelumbo nucifera HOM05D005825 ORTHO05D006483 1.4e-134 483.4 326 74.2
TAR625G0074 Trochodendron aralioides HOM05D005825 ORTHO05D006483 1.8e-134 483.0 322 76.1
vmacro20556 Vaccinium macrocarpon HOM05D005825 ORTHO05D006483 5.1e-134 481.5 326 73.6
Atru.chr7.1162 Acer truncatum HOM05D005825 ORTHO05D006483 6.7e-134 481.1 326 76.4
Cfa003372 Carpinus fangiana HOM05D005825 ORTHO05D006483 6.7e-134 481.1 323 75.2
Actinidia40470 Actinidia chinensis HOM05D005825 ORTHO05D006483 8.8e-134 480.7 324 76.5
CSS0017066 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 1.5e-133 479.9 323 74.9
Lalb_Chr13g0301881 Lupinus albus HOM05D005825 ORTHO05D006483 2.0e-133 479.6 326 74.2
Glyma.13G167400 Glycine max HOM05D005825 ORTHO05D006483 7.4e-133 477.6 325 73.5
Medtr4g114160 Medicago truncatula HOM05D005825 ORTHO05D006483 1.3e-132 476.9 325 76.0
Rhsim01G0070600 Rhododendron simsii HOM05D005825 ORTHO05D006483 2.2e-132 476.1 327 74.6
Lalb_Chr12g0197941 Lupinus albus HOM05D005825 ORTHO05D006483 2.8e-132 475.7 325 73.8
CSS0027185 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 3.7e-132 475.3 323 74.3
Ca_21683_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 3.7e-132 475.3 325 73.5
Aqoxy5G01398 Aquilegia oxysepala HOM05D005825 ORTHO05D006483 1.1e-131 473.8 322 74.5
Ciclev10008932m.g Citrus clementina HOM05D005825 ORTHO05D006483 1.4e-131 473.4 324 73.8
DCAR_009187 Daucus carota HOM05D005825 ORTHO05D006483 1.8e-131 473.0 326 73.0
EL10Ac8g18654 Beta vulgaris HOM05D005825 ORTHO05D006483 2.4e-131 472.6 323 71.5
Hund09127 Selenicereus undatus HOM05D005825 ORTHO05D006483 7.0e-131 471.1 323 72.8
AL4G19680 Arabidopsis lyrata HOM05D005825 ORTHO05D006483 1.2e-130 470.3 323 70.9
Lj4g0013357 Lotus japonicus HOM05D005825 ORTHO05D006483 2.0e-130 469.5 325 75.1
Psat4g040200 Pisum sativum HOM05D005825 ORTHO05D006483 2.0e-130 469.5 325 72.6
Carub.0004s0696 Capsella rubella HOM05D005825 ORTHO05D006483 2.6e-130 469.2 323 71.8
MD02G1032800 Malus domestica HOM05D005825 ORTHO05D006483 2.6e-130 469.2 324 73.1
Hma1.2p1_0018F.1_g012420 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 4.5e-130 468.4 325 74.5
FAN26G2420 Fragaria x ananassa HOM05D005825 ORTHO05D006483 7.7e-130 467.6 326 74.8
Hma1.2p1_2368F.1_g320700 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 1.0e-129 467.2 325 74.2
arahy.Tifrunner.gnm1.ann1.9UEQ51 Arachis hypogaea HOM05D005825 ORTHO05D006483 2.9e-129 465.7 327 70.0
PGR142G1018 Punica granatum HOM05D005825 ORTHO05D006483 2.9e-129 465.7 323 71.5
Rhsim01G0071200 Rhododendron simsii HOM05D005825 ORTHO05D006483 2.9e-129 465.7 335 72.5
FAN23G1198 Fragaria x ananassa HOM05D005825 ORTHO05D006483 5.0e-129 464.9 326 74.5
AT2G26680 Arabidopsis thaliana HOM05D005825 ORTHO05D006483 6.5e-129 464.5 323 70.0
RcHm_v2.0_Chr2g0088431 Rosa chinensis HOM05D005825 ORTHO05D006483 8.5e-129 464.2 327 73.4
Sp4g09150 Schrenkiella parvula HOM05D005825 ORTHO05D006483 1.1e-128 463.8 323 70.6
Oeu007499.1 Olea europaea HOM05D005825 ORTHO05D006483 1.5e-128 463.4 333 72.1
FAN28G2006 Fragaria x ananassa HOM05D005825 ORTHO05D006483 1.9e-128 463.0 326 75.5
FAN19G0135 Fragaria x ananassa HOM05D005825 ORTHO05D006483 2.5e-128 462.6 325 73.8
FvH4_1g03280 Fragaria vesca HOM05D005825 ORTHO05D006483 4.2e-128 461.8 325 73.5
arahy.Tifrunner.gnm1.ann1.1NB5KJ Arachis hypogaea HOM05D005825 ORTHO05D006483 5.5e-128 461.5 324 70.4
SalBow3G4290 Salvia bowleyana HOM05D005825 ORTHO05D006483 9.4e-128 460.7 325 71.1
VMungo1215G3451 Vigna mungo HOM05D005825 ORTHO05D006483 9.4e-128 460.7 326 69.0
Lsat_1_v5_gn_8_58680 Lactuca sativa HOM05D005825 ORTHO05D006483 1.6e-127 459.9 325 69.8
CiPaw.03G244100 Carya illinoinensis HOM05D005825 ORTHO05D006483 4.7e-127 458.4 326 72.4
Ah.09g226210 Amaranthus hybridus HOM05D005825 ORTHO05D006483 6.1e-127 458.0 324 71.9
Eucgr.C01173 Eucalyptus grandis HOM05D005825 ORTHO05D006483 8.0e-127 457.6 329 71.7
Lj2C942T8 Lonicera japonica HOM05D005825 ORTHO05D006483 8.0e-127 457.6 352 68.2
MBI16_g24711_MAGBIO Magnolia biondii HOM05D005825 ORTHO05D006483 1.0e-126 457.2 323 71.5
Sc08g0006620 Simmondsia chinensis HOM05D005825 ORTHO05D006483 1.0e-126 457.2 334 71.0
THA.LOC104815280 Tarenaya hassleriana HOM05D005825 ORTHO05D006483 1.8e-126 456.4 323 70.0
A04p21320 Brassica napus HOM05D005825 ORTHO05D006483 2.3e-126 456.1 327 72.8
BraA04t17698Z Brassica rapa HOM05D005825 ORTHO05D006483 2.3e-126 456.1 327 72.8
Gorai.010G064100 Gossypium raimondii HOM05D005825 ORTHO05D006483 2.3e-126 456.1 326 71.8
AUR62013360 Chenopodium quinoa HOM05D005825 ORTHO05D006483 4.0e-126 455.3 284 78.2
arahy.Tifrunner.gnm1.ann1.85XGXJ Arachis hypogaea HOM05D005825 ORTHO05D006483 6.7e-126 454.5 324 71.0
MSTRG.19597 Avicennia marina HOM05D005825 ORTHO05D006483 6.7e-126 454.5 325 70.2
Prupe.7G242700 Prunus persica HOM05D005825 ORTHO05D006483 6.7e-126 454.5 325 70.5
Thhalv10002044m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 8.8e-126 454.1 323 69.3
Gohir.A06G056101 Gossypium hirsutum HOM05D005825 ORTHO05D006483 1.1e-125 453.8 326 72.7
Sopen12g004430 Solanum pennellii HOM05D005825 ORTHO05D006483 1.5e-125 453.4 325 69.2
Gohir.D06G054601 Gossypium hirsutum HOM05D005825 ORTHO05D006483 2.0e-125 453.0 326 71.2
Solyc12g009430.2 Solanum lycopersicum HOM05D005825 ORTHO05D006483 2.0e-125 453.0 325 69.2
DCAR_017816 Daucus carota HOM05D005825 ORTHO05D006483 2.6e-125 452.6 363 64.7
Peaxi162Scf00157g01524 Petunia axillaris HOM05D005825 ORTHO05D006483 3.3e-125 452.2 325 69.5
arahy.Tifrunner.gnm1.ann1.R6UVTB Arachis hypogaea HOM05D005825 ORTHO05D006483 5.7e-125 451.4 324 71.0
Manes.06G058801 Manihot esculenta HOM05D005825 ORTHO05D006483 1.3e-124 450.3 327 72.2
BcaB06g28186 Brassica carinata HOM05D005825 ORTHO05D006483 1.7e-124 449.9 324 71.6
TWI34G0282 Tripterygium wilfordii HOM05D005825 ORTHO05D006483 3.7e-124 448.7 327 70.9
PSO782G3266 Papaver somniferum HOM05D005825 ORTHO05D006483 4.8e-124 448.4 324 71.0
PSO675G5818 Papaver somniferum HOM05D005825 ORTHO05D006483 8.2e-124 447.6 326 69.3
Thecc.09G126400 Theobroma cacao HOM05D005825 ORTHO05D006483 8.2e-124 447.6 329 70.2
C04p57230 Brassica napus HOM05D005825 ORTHO05D006483 1.1e-123 447.2 329 71.4
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 1.4e-123 446.8 325 68.3
Migut.B01717 Erythranthe guttata HOM05D005825 ORTHO05D006483 1.8e-123 446.4 327 69.7
Lj2A929T15 Lonicera japonica HOM05D005825 ORTHO05D006483 5.3e-123 444.9 352 67.0
Duzib168G1077 Durio zibethinus HOM05D005825 ORTHO05D006483 7.0e-123 444.5 325 69.5
BolC4t27250H Brassica oleracea HOM05D005825 ORTHO05D006483 9.1e-123 444.1 329 71.1
Sabra02G0094300 Salix brachista HOM05D005825 ORTHO05D006483 9.1e-123 444.1 322 70.8
Potri.014G017900 Populus trichocarpa HOM05D005825 ORTHO05D006483 2.0e-122 443.0 324 72.2
Sabra14G0011800 Salix brachista HOM05D005825 ORTHO05D006483 2.7e-122 442.6 324 72.2
BcaC02g08209 Brassica carinata HOM05D005825 ORTHO05D006483 7.7e-122 441.0 330 70.6
CAN.G1591.11 Capsicum annuum HOM05D005825 ORTHO05D006483 1.0e-121 440.7 325 67.7
SGA_v2.0_scaffold299G47720 Striga asiatica HOM05D005825 ORTHO05D006483 3.8e-121 438.7 325 67.7
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 8.5e-121 437.6 319 68.0
Thhalv10023596m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 1.5e-120 436.8 323 66.9
Nitab4.5_0014105g0010 Nicotiana tabacum HOM05D005825 ORTHO05D006483 1.6e-119 433.3 316 69.0
Nitab4.5_0002658g0050 Nicotiana tabacum HOM05D005825 ORTHO05D006483 4.7e-119 431.8 316 68.7
HanXRQChr17g0537711 Helianthus annuus HOM05D005825 ORTHO05D006483 2.3e-118 429.5 322 69.3
unitig_748.g8100 Utricularia gibba HOM05D005825 ORTHO05D006483 4.0e-118 428.7 323 68.1
HanXRQChr17g0537731 Helianthus annuus HOM05D005825 ORTHO05D006483 5.7e-117 424.9 322 67.4
CDE04G1080 Ceratophyllum demersum HOM05D005825 ORTHO05D006483 9.1e-115 417.5 326 65.0
Haze_25579 Corylus avellana HOM05D005825 ORTHO05D006483 7.7e-114 414.5 325 67.4
QL10p023454 Quercus lobata HOM05D005825 ORTHO05D006483 1.7e-113 413.3 500 48.2
ATR0225G021 Amborella trichopoda HOM05D005825 ORTHO05D006483 1.2e-109 400.6 265 75.5
HPP92_017605 Vanilla planifolia HOM05D005825 ORTHO05D006483 2.6e-109 399.4 324 63.3
AUR62011128 Chenopodium quinoa HOM05D005825 ORTHO05D006483 6.3e-108 394.8 323 63.2
HanXRQChr06g0180341 Helianthus annuus HOM05D005825 ORTHO05D006483 2.3e-105 386.3 289 67.8
Os03g0566600 Oryza sativa ssp. japonica HOM05D005825 ORTHO05D006483 2.9e-105 386.0 262 70.6
Zm00001eb043030 Zea mays HOM05D005825 ORTHO05D006483 1.9e-104 383.3 265 69.4
SHI03392 Sapria himalayana HOM05D005825 ORTHO05D006483 2.3e-102 376.3 383 53.8
ECA246G2031 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.6e-87 327.0 199 81.4
TPR.G10697 Trifolium pratense HOM05D005825 ORTHO05D006483 1.6e-87 327.0 185 87.6
Potri.002G119800 Populus trichocarpa HOM05D005825 ORTHO05D006483 6.8e-86 321.6 190 82.6
GSVIVG01015529001 Vitis vinifera HOM05D005825 ORTHO05D006483 1.4e-83 313.9 168 91.7
AagrBONN_evm.TU.Sc2ySwM_344.1792 Anthoceros agrestis HOM05D005825 ORTHO05D006483 5.4e-83 312.0 268 57.5
CiPaw.04G171000 Carya illinoinensis HOM05D005825 ORTHO05D006483 7.1e-83 311.6 178 85.4
Glyma.17G115000 Glycine max HOM05D005825 ORTHO05D006483 6.0e-82 308.5 178 85.4
SMO147G0115 Selaginella moellendorffii HOM05D005825 ORTHO05D006483 3.9e-81 305.8 259 56.4
Cc06_g08520 Coffea canephora HOM05D005825 ORTHO05D006483 3.1e-78 296.2 170 85.3
CARHR118580 Cardamine hirsuta HOM05D005825 ORTHO05D006483 9.2e-75 284.6 207 68.6
Actinidia21988 Actinidia chinensis HOM05D005825 ORTHO05D006483 5.6e-56 222.2 123 88.6
Ca_13270_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 6.9e-54 215.3 185 60.0
Ca_14592_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 1.4e-51 207.6 217 55.3
Eucgr.G00617 Eucalyptus grandis HOM05D005825 ORTHO05D006483 5.5e-51 205.7 121 84.3
Eucgr.B02426 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.5e-48 196.8 121 81.0
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 4.0e-46 189.5 163 54.6
CARHR118590 Cardamine hirsuta HOM05D005825 ORTHO05D006483 9.0e-46 188.3 120 73.3
Eucgr.C03225 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.0e-45 187.2 115 80.0
TAR381G0761 Trochodendron aralioides HOM05D005825 ORTHO05D006483 2.2e-44 183.7 151 66.9
Eucgr.E01840 Eucalyptus grandis HOM05D005825 ORTHO05D006483 5.7e-40 169.1 121 73.6
Eucgr.B02447 Eucalyptus grandis HOM05D005825 ORTHO05D006483 6.5e-36 155.6 95 83.2
CAN.G204.2 Capsicum annuum HOM05D005825 ORTHO05D006483 6.9e-22 109.0 70 75.7
SalBow6G2945 Salvia bowleyana HOM05D000060 ORTHO05D000082 1.0e-12 78.6 116 41.4
Cre12.g488550 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 5.5e-11 72.8 144 35.4
VMungo0464G1687 Vigna mungo HOM05D005825 ORTHO05D006483 7.2e-11 72.4 55 63.6
Zm00001eb219900 Zea mays HOM05D005825 ORTHO05D006483 1.2e-10 71.6 161 32.9
MCO17G084 Micromonas commoda HOM05D051517 ORTHO05D006483 5.2e-09 66.2 174 27.6
Cre02.g103000 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 1.2e-08 65.1 144 32.6
vmacro22117 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 3.3e-08 63.5 52 65.4
Cre12.g552600 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 3.7e-07 60.1 174 28.7
Cre09.g386747 Chlamydomonas reinhardtii HOM05D005825 ORTHO05D006483 6.3e-07 59.3 146 31.5
PRCOL_00003044 Prasinoderma coloniale HOM05D024924 ORTHO05D006483 3.1e-06 57.0 142 30.3


User provided reference genes

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